EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000005884 (Gene tree)
Gene ID: 102688702
Gene Symbol: rab30
Alias: zgc:100889
Full Name: RAB30%2C member RAS oncogene family
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 11698 bases
Position: chrLG3:9195075-9206772
Accession: 102688702
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000007108	MMR_HSR1	PF01926.23	2.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000007116	-	5103	XM_006627791	ENSLOCP00000007108	203 (aa)	XP_006627854	W5MFE9

Gene Model

Click here to download ENSLOCG00000005884's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000005884's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000005884	rab30	71	39.456	ENSLOCG00000002825	rab36	64	39.456
ENSLOCG00000005884	rab30	88	38.043	ENSLOCG00000014547	RAB7A	88	38.043
ENSLOCG00000005884	rab30	88	38.202	ENSLOCG00000016999	rab23	74	38.202
ENSLOCG00000005884	rab30	80	31.214	ENSLOCG00000014424	rasl11a	68	31.214
ENSLOCG00000005884	rab30	77	33.333	ENSLOCG00000017737	-	79	33.333
ENSLOCG00000005884	rab30	85	46.552	ENSLOCG00000006748	-	82	46.552
ENSLOCG00000005884	rab30	86	35.632	ENSLOCG00000016767	rabl2	75	35.632
ENSLOCG00000005884	rab30	68	32.394	ENSLOCG00000010965	arl3l2	69	32.394
ENSLOCG00000005884	rab30	81	43.713	ENSLOCG00000003453	rab42a	79	43.713
ENSLOCG00000005884	rab30	97	41.346	ENSLOCG00000013835	rab11a	95	41.346
ENSLOCG00000005884	rab30	86	45.977	ENSLOCG00000012406	rab15	82	45.977
ENSLOCG00000005884	rab30	77	33.125	ENSLOCG00000018104	rasd3	74	33.125
ENSLOCG00000005884	rab30	80	41.463	ENSLOCG00000003467	si:dkey-34d22.5	76	41.718
ENSLOCG00000005884	rab30	76	45.806	ENSLOCG00000008881	rab25a	90	45.806
ENSLOCG00000005884	rab30	98	34.634	ENSLOCG00000017482	rab9b	100	34.634
ENSLOCG00000005884	rab30	75	34.810	ENSLOCG00000016679	dnajc27	58	34.810
ENSLOCG00000005884	rab30	79	34.568	ENSLOCG00000010440	nras	85	34.568
ENSLOCG00000005884	rab30	85	47.126	ENSLOCG00000014927	rab39bb	80	47.126
ENSLOCG00000005884	rab30	94	33.679	ENSLOCG00000000684	hrasb	87	35.088
ENSLOCG00000005884	rab30	81	48.193	ENSLOCG00000002680	rab12	69	47.093
ENSLOCG00000005884	rab30	82	38.462	ENSLOCG00000015825	-	77	38.462
ENSLOCG00000005884	rab30	85	43.931	ENSLOCG00000006591	rab5ab	80	43.931
ENSLOCG00000005884	rab30	87	33.146	ENSLOCG00000015334	kras	93	33.146
ENSLOCG00000005884	rab30	89	36.957	ENSLOCG00000014749	si:dkey-13a21.4	86	36.957
ENSLOCG00000005884	rab30	81	36.145	ENSLOCG00000001886	mras	78	36.145
ENSLOCG00000005884	rab30	80	47.904	ENSLOCG00000005904	zgc:101559	71	47.904
ENSLOCG00000005884	rab30	86	51.429	ENSLOCG00000001637	rab35b	84	51.429
ENSLOCG00000005884	rab30	77	34.810	ENSLOCG00000017761	rasd4	75	34.810
ENSLOCG00000005884	rab30	89	43.889	ENSLOCG00000005509	rab14	84	43.889
ENSLOCG00000005884	rab30	87	44.886	ENSLOCG00000008865	rab11al	82	44.886
ENSLOCG00000005884	rab30	82	52.410	ENSLOCG00000016037	rab1ab	81	52.410
ENSLOCG00000005884	rab30	79	44.720	ENSLOCG00000015191	rab41	76	44.720
ENSLOCG00000005884	rab30	90	45.355	ENSLOCG00000005108	rab2a	86	45.355
ENSLOCG00000005884	rab30	80	53.374	ENSLOCG00000014692	zgc:171927	77	53.374
ENSLOCG00000005884	rab30	86	48.889	ENSLOCG00000015358	rab33a	74	48.889
ENSLOCG00000005884	rab30	83	42.262	ENSLOCG00000012566	rab5c	79	42.262
ENSLOCG00000005884	rab30	98	34.634	ENSLOCG00000018352	rab9b	100	34.634
ENSLOCG00000005884	rab30	70	30.612	ENSLOCG00000015256	-	74	30.612
ENSLOCG00000005884	rab30	77	36.250	ENSLOCG00000005802	rab34a	60	36.250
ENSLOCG00000005884	rab30	83	48.824	ENSLOCG00000007491	rab18a	82	48.824
ENSLOCG00000005884	rab30	78	43.671	ENSLOCG00000007029	rab22a	81	43.671
ENSLOCG00000005884	rab30	80	49.701	ENSLOCG00000010535	rab33ba	72	49.701
ENSLOCG00000005884	rab30	80	32.927	ENSLOCG00000007682	rhebl1	88	32.927
ENSLOCG00000005884	rab30	78	32.099	ENSLOCG00000010004	rheb	86	32.099
ENSLOCG00000005884	rab30	80	32.530	ENSLOCG00000016464	si:cabz01085950.1	81	32.530
ENSLOCG00000005884	rab30	76	40.000	ENSLOCG00000017414	rab9a	79	40.000
ENSLOCG00000005884	rab30	81	39.412	ENSLOCG00000015576	zgc:100918	82	39.412

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000005884	rab30	100	89.163	ENSG00000137502	RAB30	100	98.000	Homo_sapiens
ENSLOCG00000005884	rab30	100	89.655	ENSAPOG00000022625	rab30	100	89.655	Acanthochromis_polyacanthus
ENSLOCG00000005884	rab30	100	89.163	ENSAMEG00000005231	RAB30	100	89.163	Ailuropoda_melanoleuca
ENSLOCG00000005884	rab30	95	89.637	ENSAOCG00000012556	rab30	69	89.637	Amphiprion_ocellaris
ENSLOCG00000005884	rab30	100	89.655	ENSAPEG00000012044	rab30	100	89.655	Amphiprion_percula
ENSLOCG00000005884	rab30	100	89.655	ENSATEG00000010475	rab30	100	89.655	Anabas_testudineus
ENSLOCG00000005884	rab30	100	88.670	ENSACAG00000001098	RAB30	100	88.670	Anolis_carolinensis
ENSLOCG00000005884	rab30	100	89.163	ENSANAG00000029292	RAB30	100	89.163	Aotus_nancymaae
ENSLOCG00000005884	rab30	100	89.163	ENSACLG00000023526	rab30	100	89.163	Astatotilapia_calliptera
ENSLOCG00000005884	rab30	100	90.148	ENSAMXG00000009935	rab30	82	90.148	Astyanax_mexicanus
ENSLOCG00000005884	rab30	100	89.163	ENSBTAG00000002417	RAB30	100	89.163	Bos_taurus
ENSLOCG00000005884	rab30	85	63.793	WBGene00004282	rab-30	81	63.793	Caenorhabditis_elegans
ENSLOCG00000005884	rab30	100	89.163	ENSCJAG00000041773	RAB30	100	89.163	Callithrix_jacchus
ENSLOCG00000005884	rab30	100	89.163	ENSCAFG00000004616	RAB30	100	89.163	Canis_familiaris
ENSLOCG00000005884	rab30	100	89.163	ENSCAFG00020017865	RAB30	100	89.163	Canis_lupus_dingo
ENSLOCG00000005884	rab30	100	89.163	ENSCHIG00000020601	RAB30	100	89.163	Capra_hircus
ENSLOCG00000005884	rab30	100	89.163	ENSTSYG00000009392	RAB30	100	89.163	Carlito_syrichta
ENSLOCG00000005884	rab30	100	89.163	ENSCAPG00000009331	RAB30	100	89.163	Cavia_aperea
ENSLOCG00000005884	rab30	100	89.163	ENSCPOG00000005047	RAB30	100	89.163	Cavia_porcellus
ENSLOCG00000005884	rab30	100	89.163	ENSCCAG00000026824	RAB30	100	89.163	Cebus_capucinus
ENSLOCG00000005884	rab30	100	89.163	ENSCATG00000040441	RAB30	100	89.163	Cercocebus_atys
ENSLOCG00000005884	rab30	100	89.163	ENSCLAG00000014030	RAB30	100	89.163	Chinchilla_lanigera
ENSLOCG00000005884	rab30	100	89.163	ENSCSAG00000003704	RAB30	100	89.163	Chlorocebus_sabaeus
ENSLOCG00000005884	rab30	100	91.133	ENSCPBG00000006855	RAB30	100	91.133	Chrysemys_picta_bellii
ENSLOCG00000005884	rab30	100	89.655	ENSCANG00000022240	RAB30	100	89.655	Colobus_angolensis_palliatus
ENSLOCG00000005884	rab30	100	89.163	ENSCGRG00001021787	Rab30	100	89.163	Cricetulus_griseus_chok1gshd
ENSLOCG00000005884	rab30	100	89.163	ENSCGRG00000014842	Rab30	100	89.163	Cricetulus_griseus_crigri
ENSLOCG00000005884	rab30	100	89.163	ENSCSEG00000007292	rab30	100	89.163	Cynoglossus_semilaevis
ENSLOCG00000005884	rab30	100	88.177	ENSCVAG00000018085	rab30	100	88.177	Cyprinodon_variegatus
ENSLOCG00000005884	rab30	99	89.552	ENSDARG00000037884	rab30	100	89.552	Danio_rerio
ENSLOCG00000005884	rab30	100	89.163	ENSDNOG00000039115	RAB30	100	89.163	Dasypus_novemcinctus
ENSLOCG00000005884	rab30	100	89.163	ENSDORG00000010504	-	100	89.163	Dipodomys_ordii
ENSLOCG00000005884	rab30	100	87.685	ENSDORG00000015066	-	100	87.685	Dipodomys_ordii
ENSLOCG00000005884	rab30	85	72.832	FBgn0031882	Rab30	94	63.810	Drosophila_melanogaster
ENSLOCG00000005884	rab30	100	89.163	ENSEASG00005012754	RAB30	100	89.163	Equus_asinus_asinus
ENSLOCG00000005884	rab30	100	89.163	ENSECAG00000022769	RAB30	100	89.163	Equus_caballus
ENSLOCG00000005884	rab30	100	86.765	ENSELUG00000022997	rab30	100	87.624	Esox_lucius
ENSLOCG00000005884	rab30	100	89.163	ENSFCAG00000014416	RAB30	100	89.163	Felis_catus
ENSLOCG00000005884	rab30	100	88.670	ENSFALG00000007765	RAB30	100	88.670	Ficedula_albicollis
ENSLOCG00000005884	rab30	100	89.163	ENSFDAG00000014521	RAB30	100	89.163	Fukomys_damarensis
ENSLOCG00000005884	rab30	100	88.670	ENSFHEG00000013918	rab30	100	88.670	Fundulus_heteroclitus
ENSLOCG00000005884	rab30	100	86.207	ENSGMOG00000002552	rab30	100	86.207	Gadus_morhua
ENSLOCG00000005884	rab30	100	88.670	ENSGALG00000017248	RAB30	100	88.670	Gallus_gallus
ENSLOCG00000005884	rab30	100	88.670	ENSGAFG00000020309	rab30	100	88.670	Gambusia_affinis
ENSLOCG00000005884	rab30	100	89.655	ENSGACG00000012006	rab30	100	89.655	Gasterosteus_aculeatus
ENSLOCG00000005884	rab30	100	91.133	ENSGAGG00000004474	RAB30	100	91.133	Gopherus_agassizii
ENSLOCG00000005884	rab30	100	89.163	ENSGGOG00000017157	RAB30	100	89.163	Gorilla_gorilla
ENSLOCG00000005884	rab30	100	89.163	ENSHBUG00000000993	rab30	93	89.163	Haplochromis_burtoni
ENSLOCG00000005884	rab30	100	89.163	ENSHGLG00000002759	RAB30	100	89.163	Heterocephalus_glaber_female
ENSLOCG00000005884	rab30	100	89.163	ENSHGLG00100001213	RAB30	100	89.163	Heterocephalus_glaber_male
ENSLOCG00000005884	rab30	66	90.977	ENSHCOG00000010707	rab30	71	90.977	Hippocampus_comes
ENSLOCG00000005884	rab30	99	90.050	ENSIPUG00000021010	Rab30	100	90.050	Ictalurus_punctatus
ENSLOCG00000005884	rab30	100	89.163	ENSSTOG00000020966	RAB30	100	89.163	Ictidomys_tridecemlineatus
ENSLOCG00000005884	rab30	100	89.163	ENSJJAG00000020064	Rab30	100	89.163	Jaculus_jaculus
ENSLOCG00000005884	rab30	100	89.655	ENSKMAG00000004439	rab30	100	89.655	Kryptolebias_marmoratus
ENSLOCG00000005884	rab30	100	89.163	ENSLBEG00000001146	rab30	100	89.163	Labrus_bergylta
ENSLOCG00000005884	rab30	100	91.626	ENSLACG00000006407	RAB30	100	91.626	Latimeria_chalumnae
ENSLOCG00000005884	rab30	100	89.655	ENSLAFG00000010711	RAB30	100	89.655	Loxodonta_africana
ENSLOCG00000005884	rab30	100	89.163	ENSMFAG00000033119	RAB30	100	89.163	Macaca_fascicularis
ENSLOCG00000005884	rab30	100	89.163	ENSMMUG00000007842	RAB30	100	89.163	Macaca_mulatta
ENSLOCG00000005884	rab30	100	89.163	ENSMNEG00000037406	RAB30	100	89.163	Macaca_nemestrina
ENSLOCG00000005884	rab30	100	89.163	ENSMLEG00000039496	RAB30	100	89.163	Mandrillus_leucophaeus
ENSLOCG00000005884	rab30	100	89.655	ENSMAMG00000011973	rab30	100	89.655	Mastacembelus_armatus
ENSLOCG00000005884	rab30	100	89.163	ENSMZEG00005024032	rab30	93	89.163	Maylandia_zebra
ENSLOCG00000005884	rab30	100	88.725	ENSMGAG00000015230	RAB30	100	88.725	Meleagris_gallopavo
ENSLOCG00000005884	rab30	100	89.163	ENSMAUG00000008179	Rab30	100	89.163	Mesocricetus_auratus
ENSLOCG00000005884	rab30	100	89.163	ENSMICG00000012002	RAB30	100	89.163	Microcebus_murinus
ENSLOCG00000005884	rab30	100	89.163	ENSMOCG00000009821	-	100	89.163	Microtus_ochrogaster
ENSLOCG00000005884	rab30	100	89.163	ENSMMOG00000000304	rab30	100	89.163	Mola_mola
ENSLOCG00000005884	rab30	100	89.655	ENSMODG00000004506	RAB30	100	89.655	Monodelphis_domestica
ENSLOCG00000005884	rab30	100	90.148	ENSMALG00000010438	rab30	100	90.148	Monopterus_albus
ENSLOCG00000005884	rab30	100	88.670	MGP_CAROLIEiJ_G0029992	Rab30	100	88.670	Mus_caroli
ENSLOCG00000005884	rab30	100	89.163	ENSMUSG00000030643	Rab30	100	98.131	Mus_musculus
ENSLOCG00000005884	rab30	100	89.163	MGP_PahariEiJ_G0013212	Rab30	100	89.163	Mus_pahari
ENSLOCG00000005884	rab30	100	89.163	MGP_SPRETEiJ_G0031102	Rab30	100	89.163	Mus_spretus
ENSLOCG00000005884	rab30	100	89.163	ENSMPUG00000008088	RAB30	100	89.163	Mustela_putorius_furo
ENSLOCG00000005884	rab30	100	89.655	ENSMLUG00000006552	RAB30	100	89.655	Myotis_lucifugus
ENSLOCG00000005884	rab30	100	89.163	ENSNGAG00000018930	Rab30	100	89.163	Nannospalax_galili
ENSLOCG00000005884	rab30	100	89.163	ENSNBRG00000002082	rab30	93	89.163	Neolamprologus_brichardi
ENSLOCG00000005884	rab30	100	89.163	ENSNLEG00000029364	RAB30	100	89.163	Nomascus_leucogenys
ENSLOCG00000005884	rab30	100	88.670	ENSMEUG00000012886	RAB30	100	88.670	Notamacropus_eugenii
ENSLOCG00000005884	rab30	59	96.667	ENSOPRG00000007511	RAB30	100	96.667	Ochotona_princeps
ENSLOCG00000005884	rab30	100	89.163	ENSODEG00000003833	RAB30	100	89.163	Octodon_degus
ENSLOCG00000005884	rab30	100	89.163	ENSONIG00000005708	rab30	100	89.163	Oreochromis_niloticus
ENSLOCG00000005884	rab30	100	89.163	ENSOCUG00000007580	RAB30	100	89.163	Oryctolagus_cuniculus
ENSLOCG00000005884	rab30	100	88.670	ENSORLG00000029812	rab30	100	88.670	Oryzias_latipes
ENSLOCG00000005884	rab30	100	88.670	ENSORLG00020015288	rab30	100	88.670	Oryzias_latipes_hni
ENSLOCG00000005884	rab30	100	88.670	ENSORLG00015020972	rab30	100	88.670	Oryzias_latipes_hsok
ENSLOCG00000005884	rab30	100	88.177	ENSOMEG00000001613	rab30	100	88.177	Oryzias_melastigma
ENSLOCG00000005884	rab30	100	89.163	ENSOGAG00000033189	RAB30	100	89.163	Otolemur_garnettii
ENSLOCG00000005884	rab30	100	89.163	ENSOARG00000005688	RAB30	100	89.163	Ovis_aries
ENSLOCG00000005884	rab30	100	89.163	ENSPPAG00000031604	RAB30	100	89.163	Pan_paniscus
ENSLOCG00000005884	rab30	100	89.163	ENSPPRG00000023881	RAB30	100	89.163	Panthera_pardus
ENSLOCG00000005884	rab30	100	89.163	ENSPTIG00000009836	RAB30	100	89.163	Panthera_tigris_altaica
ENSLOCG00000005884	rab30	100	89.163	ENSPTRG00000004125	RAB30	100	89.163	Pan_troglodytes
ENSLOCG00000005884	rab30	100	89.163	ENSPANG00000003974	RAB30	100	89.163	Papio_anubis
ENSLOCG00000005884	rab30	99	90.099	ENSPKIG00000015202	rab30	99	90.099	Paramormyrops_kingsleyae
ENSLOCG00000005884	rab30	100	90.640	ENSPSIG00000003078	RAB30	100	90.640	Pelodiscus_sinensis
ENSLOCG00000005884	rab30	100	78.448	ENSPMGG00000016093	rab30	100	78.448	Periophthalmus_magnuspinnatus
ENSLOCG00000005884	rab30	100	89.163	ENSPEMG00000023854	Rab30	100	89.163	Peromyscus_maniculatus_bairdii
ENSLOCG00000005884	rab30	98	66.184	ENSPMAG00000006105	rab30	98	66.184	Petromyzon_marinus
ENSLOCG00000005884	rab30	100	89.655	ENSPCIG00000027547	RAB30	94	89.655	Phascolarctos_cinereus
ENSLOCG00000005884	rab30	100	88.670	ENSPFOG00000005479	rab30	100	88.670	Poecilia_formosa
ENSLOCG00000005884	rab30	100	88.670	ENSPLAG00000015383	rab30	100	88.670	Poecilia_latipinna
ENSLOCG00000005884	rab30	100	88.670	ENSPMEG00000009701	rab30	100	88.670	Poecilia_mexicana
ENSLOCG00000005884	rab30	100	88.670	ENSPREG00000014634	rab30	100	88.670	Poecilia_reticulata
ENSLOCG00000005884	rab30	100	89.163	ENSPPYG00000003733	RAB30	100	89.163	Pongo_abelii
ENSLOCG00000005884	rab30	100	89.655	ENSPCAG00000000574	RAB30	100	89.655	Procavia_capensis
ENSLOCG00000005884	rab30	100	89.163	ENSPCOG00000017316	RAB30	100	89.163	Propithecus_coquereli
ENSLOCG00000005884	rab30	100	89.163	ENSPVAG00000005455	RAB30	100	89.163	Pteropus_vampyrus
ENSLOCG00000005884	rab30	100	88.670	ENSPNYG00000009728	rab30	93	88.670	Pundamilia_nyererei
ENSLOCG00000005884	rab30	99	91.045	ENSPNAG00000010760	rab30	100	91.045	Pygocentrus_nattereri
ENSLOCG00000005884	rab30	100	89.163	ENSRNOG00000010224	Rab30	100	89.163	Rattus_norvegicus
ENSLOCG00000005884	rab30	100	89.163	ENSRBIG00000039227	RAB30	100	89.163	Rhinopithecus_bieti
ENSLOCG00000005884	rab30	100	89.163	ENSRROG00000031260	RAB30	100	89.163	Rhinopithecus_roxellana
ENSLOCG00000005884	rab30	100	89.163	ENSSBOG00000026403	RAB30	100	89.163	Saimiri_boliviensis_boliviensis
ENSLOCG00000005884	rab30	100	88.350	ENSSHAG00000018081	RAB30	100	88.350	Sarcophilus_harrisii
ENSLOCG00000005884	rab30	100	89.163	ENSSMAG00000002500	rab30	100	89.163	Scophthalmus_maximus
ENSLOCG00000005884	rab30	100	90.148	ENSSDUG00000013325	rab30	100	90.148	Seriola_dumerili
ENSLOCG00000005884	rab30	100	90.148	ENSSLDG00000022533	rab30	100	90.148	Seriola_lalandi_dorsalis
ENSLOCG00000005884	rab30	100	88.670	ENSSPUG00000006349	RAB30	100	88.670	Sphenodon_punctatus
ENSLOCG00000005884	rab30	100	90.148	ENSSPAG00000013422	rab30	100	90.148	Stegastes_partitus
ENSLOCG00000005884	rab30	100	89.163	ENSSSCG00000014900	RAB30	100	89.163	Sus_scrofa
ENSLOCG00000005884	rab30	100	88.670	ENSTGUG00000012941	RAB30	100	88.670	Taeniopygia_guttata
ENSLOCG00000005884	rab30	99	89.552	ENSTRUG00000022559	rab30	99	89.552	Takifugu_rubripes
ENSLOCG00000005884	rab30	100	89.163	ENSTBEG00000009832	RAB30	100	89.163	Tupaia_belangeri
ENSLOCG00000005884	rab30	100	89.163	ENSTTRG00000006100	RAB30	100	89.163	Tursiops_truncatus
ENSLOCG00000005884	rab30	100	89.163	ENSUAMG00000009326	RAB30	100	89.163	Ursus_americanus
ENSLOCG00000005884	rab30	100	89.163	ENSUMAG00000023572	RAB30	100	89.163	Ursus_maritimus
ENSLOCG00000005884	rab30	100	89.163	ENSVVUG00000017471	RAB30	100	89.163	Vulpes_vulpes
ENSLOCG00000005884	rab30	100	88.177	ENSXETG00000013633	rab30	100	88.177	Xenopus_tropicalis
ENSLOCG00000005884	rab30	100	88.670	ENSXMAG00000025848	rab30	100	88.670	Xiphophorus_maculatus