EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000005904 (Gene tree)
Gene ID: 102697452
Gene Symbol: zgc:101559
Alias: -
Full Name: ras-related protein Rab-33B-like
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 3956 bases
Position: chrLG17:15732377-15736332
Accession: 102697452
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000007126	MMR_HSR1	PF01926.23	6.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000007134	-	2979	XM_006639074	ENSLOCP00000007126	234 (aa)	XP_006639137	W5MFG7

Gene Model

Click here to download ENSLOCG00000005904's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000005904's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000005904	zgc:101559	68	32.704	ENSLOCG00000001886	mras	80	33.918
ENSLOCG00000005904	zgc:101559	64	41.611	ENSLOCG00000015191	rab41	70	41.611
ENSLOCG00000005904	zgc:101559	88	41.063	ENSLOCG00000001637	rab35b	98	41.063
ENSLOCG00000005904	zgc:101559	74	45.087	ENSLOCG00000014692	zgc:171927	79	45.087
ENSLOCG00000005904	zgc:101559	81	40.526	ENSLOCG00000013835	rab11a	84	40.526
ENSLOCG00000005904	zgc:101559	74	32.432	ENSLOCG00000014424	rasl11a	70	32.432
ENSLOCG00000005904	zgc:101559	63	31.293	ENSLOCG00000010004	rheb	79	31.293
ENSLOCG00000005904	zgc:101559	79	30.729	ENSLOCG00000016464	si:cabz01085950.1	91	30.729
ENSLOCG00000005904	zgc:101559	70	41.420	ENSLOCG00000014547	RAB7A	78	41.420
ENSLOCG00000005904	zgc:101559	84	31.188	ENSLOCG00000014749	si:dkey-13a21.4	96	31.188
ENSLOCG00000005904	zgc:101559	81	39.474	ENSLOCG00000008865	rab11al	86	39.474
ENSLOCG00000005904	zgc:101559	84	45.960	ENSLOCG00000016037	rab1ab	92	45.960
ENSLOCG00000005904	zgc:101559	70	42.012	ENSLOCG00000015576	zgc:100918	80	41.420
ENSLOCG00000005904	zgc:101559	74	34.091	ENSLOCG00000016999	rab23	76	34.197
ENSLOCG00000005904	zgc:101559	73	40.936	ENSLOCG00000006591	rab5ab	77	40.936
ENSLOCG00000005904	zgc:101559	66	37.342	ENSLOCG00000017482	rab9b	77	37.342
ENSLOCG00000005904	zgc:101559	71	37.126	ENSLOCG00000000684	hrasb	92	37.430
ENSLOCG00000005904	zgc:101559	71	47.904	ENSLOCG00000005884	rab30	80	47.904
ENSLOCG00000005904	zgc:101559	66	37.342	ENSLOCG00000018352	rab9b	77	37.342
ENSLOCG00000005904	zgc:101559	66	43.506	ENSLOCG00000005108	rab2a	72	43.506
ENSLOCG00000005904	zgc:101559	68	42.405	ENSLOCG00000012406	rab15	72	42.405
ENSLOCG00000005904	zgc:101559	62	39.726	ENSLOCG00000005802	rab34a	55	39.726
ENSLOCG00000005904	zgc:101559	71	41.916	ENSLOCG00000005509	rab14	75	41.916
ENSLOCG00000005904	zgc:101559	73	42.105	ENSLOCG00000012566	rab5c	78	42.105
ENSLOCG00000005904	zgc:101559	75	36.932	ENSLOCG00000007029	rab22a	88	36.932
ENSLOCG00000005904	zgc:101559	80	41.837	ENSLOCG00000006748	-	92	41.837
ENSLOCG00000005904	zgc:101559	68	31.056	ENSLOCG00000014119	rasl11b	68	31.056
ENSLOCG00000005904	zgc:101559	75	32.653	ENSLOCG00000015825	-	90	32.653
ENSLOCG00000005904	zgc:101559	71	38.323	ENSLOCG00000003467	si:dkey-34d22.5	76	38.323
ENSLOCG00000005904	zgc:101559	66	39.744	ENSLOCG00000002825	rab36	68	39.744
ENSLOCG00000005904	zgc:101559	71	35.928	ENSLOCG00000015334	kras	90	36.313
ENSLOCG00000005904	zgc:101559	66	38.608	ENSLOCG00000017414	rab9a	78	38.608
ENSLOCG00000005904	zgc:101559	65	30.263	ENSLOCG00000007682	rhebl1	82	30.263
ENSLOCG00000005904	zgc:101559	62	34.667	ENSLOCG00000016679	dnajc27	55	34.667
ENSLOCG00000005904	zgc:101559	86	66.502	ENSLOCG00000010535	rab33ba	88	66.502
ENSLOCG00000005904	zgc:101559	66	42.208	ENSLOCG00000007491	rab18a	73	42.208
ENSLOCG00000005904	zgc:101559	84	37.500	ENSLOCG00000003453	rab42a	96	37.500
ENSLOCG00000005904	zgc:101559	84	42.512	ENSLOCG00000014927	rab39bb	94	42.512
ENSLOCG00000005904	zgc:101559	74	41.143	ENSLOCG00000002680	rab12	69	41.143
ENSLOCG00000005904	zgc:101559	69	34.568	ENSLOCG00000010440	nras	89	35.057
ENSLOCG00000005904	zgc:101559	65	41.722	ENSLOCG00000008881	rab25a	87	41.722
ENSLOCG00000005904	zgc:101559	86	62.069	ENSLOCG00000015358	rab33a	84	62.069
ENSLOCG00000005904	zgc:101559	70	36.095	ENSLOCG00000016767	rabl2	71	36.095

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000005904	zgc:101559	99	71.368	ENSAPOG00000007503	zgc:101559	100	71.368	Acanthochromis_polyacanthus
ENSLOCG00000005904	zgc:101559	88	76.214	ENSACIG00000021459	zgc:101559	90	76.214	Amphilophus_citrinellus
ENSLOCG00000005904	zgc:101559	99	71.368	ENSAOCG00000024675	zgc:101559	100	71.368	Amphiprion_ocellaris
ENSLOCG00000005904	zgc:101559	99	71.368	ENSAPEG00000005176	zgc:101559	100	71.368	Amphiprion_percula
ENSLOCG00000005904	zgc:101559	89	76.077	ENSATEG00000007761	zgc:101559	89	76.077	Anabas_testudineus
ENSLOCG00000005904	zgc:101559	99	70.815	ENSACLG00000027006	zgc:101559	99	70.815	Astatotilapia_calliptera
ENSLOCG00000005904	zgc:101559	100	72.245	ENSAMXG00000040460	zgc:101559	99	72.245	Astyanax_mexicanus
ENSLOCG00000005904	zgc:101559	89	75.120	ENSCSEG00000006243	zgc:101559	89	75.120	Cynoglossus_semilaevis
ENSLOCG00000005904	zgc:101559	89	74.163	ENSCVAG00000019227	zgc:101559	89	74.163	Cyprinodon_variegatus
ENSLOCG00000005904	zgc:101559	88	79.612	ENSDARG00000003257	zgc:101559	88	79.612	Danio_rerio
ENSLOCG00000005904	zgc:101559	89	76.077	ENSFHEG00000011483	zgc:101559	89	76.077	Fundulus_heteroclitus
ENSLOCG00000005904	zgc:101559	90	74.882	ENSGMOG00000011665	zgc:101559	100	74.882	Gadus_morhua
ENSLOCG00000005904	zgc:101559	99	68.803	ENSGAFG00000021202	zgc:101559	100	68.803	Gambusia_affinis
ENSLOCG00000005904	zgc:101559	93	70.320	ENSGACG00000001725	zgc:101559	94	70.320	Gasterosteus_aculeatus
ENSLOCG00000005904	zgc:101559	99	70.513	ENSHBUG00000007827	zgc:101559	100	70.513	Haplochromis_burtoni
ENSLOCG00000005904	zgc:101559	84	76.000	ENSHCOG00000009133	zgc:101559	85	76.000	Hippocampus_comes
ENSLOCG00000005904	zgc:101559	87	77.451	ENSIPUG00000022394	zgc:101559	88	77.451	Ictalurus_punctatus
ENSLOCG00000005904	zgc:101559	88	76.329	ENSKMAG00000002862	zgc:101559	88	76.329	Kryptolebias_marmoratus
ENSLOCG00000005904	zgc:101559	99	70.940	ENSLBEG00000025798	zgc:101559	100	70.940	Labrus_bergylta
ENSLOCG00000005904	zgc:101559	88	74.163	ENSLACG00000011557	zgc:101559	90	74.163	Latimeria_chalumnae
ENSLOCG00000005904	zgc:101559	89	76.077	ENSMAMG00000017431	zgc:101559	89	76.077	Mastacembelus_armatus
ENSLOCG00000005904	zgc:101559	99	70.513	ENSMZEG00005021778	zgc:101559	100	70.513	Maylandia_zebra
ENSLOCG00000005904	zgc:101559	99	67.521	ENSMMOG00000019779	zgc:101559	100	67.521	Mola_mola
ENSLOCG00000005904	zgc:101559	88	75.362	ENSMALG00000003712	zgc:101559	88	75.362	Monopterus_albus
ENSLOCG00000005904	zgc:101559	99	70.513	ENSNBRG00000002684	zgc:101559	100	70.513	Neolamprologus_brichardi
ENSLOCG00000005904	zgc:101559	99	70.513	ENSONIG00000006715	-	100	70.513	Oreochromis_niloticus
ENSLOCG00000005904	zgc:101559	99	68.240	ENSORLG00000030642	zgc:101559	100	68.240	Oryzias_latipes
ENSLOCG00000005904	zgc:101559	99	68.670	ENSORLG00020012685	zgc:101559	100	68.670	Oryzias_latipes_hni
ENSLOCG00000005904	zgc:101559	99	68.240	ENSORLG00015016047	zgc:101559	100	68.240	Oryzias_latipes_hsok
ENSLOCG00000005904	zgc:101559	99	68.670	ENSOMEG00000013128	zgc:101559	100	68.670	Oryzias_melastigma
ENSLOCG00000005904	zgc:101559	99	72.532	ENSPKIG00000013397	zgc:101559	98	72.532	Paramormyrops_kingsleyae
ENSLOCG00000005904	zgc:101559	99	70.085	ENSPFOG00000009101	-	100	70.085	Poecilia_formosa
ENSLOCG00000005904	zgc:101559	99	70.085	ENSPLAG00000020627	zgc:101559	100	70.085	Poecilia_latipinna
ENSLOCG00000005904	zgc:101559	99	70.085	ENSPMEG00000010152	zgc:101559	100	70.085	Poecilia_mexicana
ENSLOCG00000005904	zgc:101559	99	69.658	ENSPREG00000007017	zgc:101559	100	69.658	Poecilia_reticulata
ENSLOCG00000005904	zgc:101559	99	70.513	ENSPNYG00000012922	zgc:101559	100	70.513	Pundamilia_nyererei
ENSLOCG00000005904	zgc:101559	99	74.569	ENSPNAG00000017856	zgc:101559	100	74.569	Pygocentrus_nattereri
ENSLOCG00000005904	zgc:101559	94	76.549	ENSSFOG00015006175	zgc:101559	96	76.549	Scleropages_formosus
ENSLOCG00000005904	zgc:101559	89	71.905	ENSSMAG00000002229	zgc:101559	89	71.905	Scophthalmus_maximus
ENSLOCG00000005904	zgc:101559	99	70.513	ENSSDUG00000008151	zgc:101559	100	70.513	Seriola_dumerili
ENSLOCG00000005904	zgc:101559	99	70.085	ENSSLDG00000019214	zgc:101559	100	70.085	Seriola_lalandi_dorsalis
ENSLOCG00000005904	zgc:101559	99	71.795	ENSSPAG00000006404	zgc:101559	100	71.795	Stegastes_partitus
ENSLOCG00000005904	zgc:101559	99	66.667	ENSTRUG00000009903	zgc:101559	99	66.667	Takifugu_rubripes
ENSLOCG00000005904	zgc:101559	81	75.789	ENSTNIG00000015000	zgc:101559	81	75.789	Tetraodon_nigroviridis
ENSLOCG00000005904	zgc:101559	99	69.231	ENSXCOG00000018683	zgc:101559	100	69.231	Xiphophorus_couchianus
ENSLOCG00000005904	zgc:101559	99	69.658	ENSXMAG00000011171	zgc:101559	100	69.658	Xiphophorus_maculatus