EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000005966 (Gene tree)
Gene ID: 102695951
Gene Symbol: celf1
Alias: Bruno-like|brul|cb920|cugbp1
Full Name: CUGBP Elav-like family member 1
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 45790 bases
Position: chrLG27:12489492-12535281
Accession: 102695951
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000007208	RRM_1	PF00076.22	3.6e-50	1	3
ENSLOCP00000007208	RRM_1	PF00076.22	3.6e-50	2	3
ENSLOCP00000007208	RRM_1	PF00076.22	3.6e-50	3	3
ENSLOCP00000007227	RRM_1	PF00076.22	3.7e-50	1	3
ENSLOCP00000007227	RRM_1	PF00076.22	3.7e-50	2	3
ENSLOCP00000007227	RRM_1	PF00076.22	3.7e-50	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000007235	-	4571	XM_006642685	ENSLOCP00000007227	534 (aa)	XP_006642748	W5MFR8
ENSLOCT00000007216	-	4609	-	ENSLOCP00000007208	526 (aa)	-	W5MFP9

Gene Model

Click here to download ENSLOCG00000005966's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000005966's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000005966	celf1	61	32.895	ENSLOCG00000009681	PABPC1	57	32.895
ENSLOCG00000005966	celf1	91	44.941	ENSLOCG00000006518	celf3b	100	42.326
ENSLOCG00000005966	celf1	64	42.553	ENSLOCG00000007647	elavl3	74	42.553
ENSLOCG00000005966	celf1	95	45.648	ENSLOCG00000005481	celf5a	100	43.276
ENSLOCG00000005966	celf1	97	74.280	ENSLOCG00000015690	celf2	96	75.624
ENSLOCG00000005966	celf1	64	40.741	ENSLOCG00000012575	ELAVL2	70	40.741
ENSLOCG00000005966	celf1	55	45.679	ENSLOCG00000000284	elavl1b	77	45.679
ENSLOCG00000005966	celf1	90	40.421	ENSLOCG00000004792	celf4	98	42.651
ENSLOCG00000005966	celf1	58	39.506	ENSLOCG00000009363	elavl4	63	39.506
ENSLOCG00000005966	celf1	91	43.720	ENSLOCG00000015141	si:dkey-205h23.2	58	66.667
ENSLOCG00000005966	celf1	61	37.500	ENSLOCG00000001877	pabpc4	52	37.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000005966	celf1	94	88.153	ENSG00000149187	CELF1	100	93.684	Homo_sapiens
ENSLOCG00000005966	celf1	94	89.400	ENSAPOG00000024000	celf1	100	89.800	Acanthochromis_polyacanthus
ENSLOCG00000005966	celf1	95	85.941	ENSAMEG00000007596	CELF1	95	86.337	Ailuropoda_melanoleuca
ENSLOCG00000005966	celf1	94	86.290	ENSACIG00000023843	celf1	100	86.694	Amphilophus_citrinellus
ENSLOCG00000005966	celf1	95	88.605	ENSAOCG00000001252	celf1	100	89.800	Amphiprion_ocellaris
ENSLOCG00000005966	celf1	95	89.243	ENSAPEG00000002340	celf1	97	89.641	Amphiprion_percula
ENSLOCG00000005966	celf1	94	85.081	ENSATEG00000010871	celf1	100	84.476	Anabas_testudineus
ENSLOCG00000005966	celf1	95	87.475	ENSACAG00000002114	CELF1	95	87.475	Anolis_carolinensis
ENSLOCG00000005966	celf1	95	86.733	ENSANAG00000031770	CELF1	97	85.742	Aotus_nancymaae
ENSLOCG00000005966	celf1	95	87.649	ENSACLG00000010181	-	100	86.290	Astatotilapia_calliptera
ENSLOCG00000005966	celf1	95	92.247	ENSAMXG00000020576	celf1	94	92.445	Astyanax_mexicanus
ENSLOCG00000005966	celf1	95	85.743	ENSBTAG00000002520	CELF1	100	86.255	Bos_taurus
ENSLOCG00000005966	celf1	95	86.931	ENSCJAG00000020133	CELF1	95	87.327	Callithrix_jacchus
ENSLOCG00000005966	celf1	95	86.139	ENSCAFG00000008452	CELF1	95	86.535	Canis_familiaris
ENSLOCG00000005966	celf1	95	86.139	ENSCAFG00020025487	CELF1	100	83.826	Canis_lupus_dingo
ENSLOCG00000005966	celf1	95	86.337	ENSCHIG00000024582	CELF1	95	86.733	Capra_hircus
ENSLOCG00000005966	celf1	94	86.853	ENSTSYG00000003866	CELF1	100	86.653	Carlito_syrichta
ENSLOCG00000005966	celf1	83	67.421	ENSCAPG00000006787	CELF1	94	63.508	Cavia_aperea
ENSLOCG00000005966	celf1	94	86.853	ENSCPOG00000036381	CELF1	100	87.251	Cavia_porcellus
ENSLOCG00000005966	celf1	95	86.931	ENSCCAG00000033487	CELF1	100	86.653	Cebus_capucinus
ENSLOCG00000005966	celf1	94	87.052	ENSCATG00000040143	CELF1	100	87.450	Cercocebus_atys
ENSLOCG00000005966	celf1	95	86.733	ENSCLAG00000011791	CELF1	100	83.665	Chinchilla_lanigera
ENSLOCG00000005966	celf1	95	86.931	ENSCSAG00000005786	CELF1	97	85.938	Chlorocebus_sabaeus
ENSLOCG00000005966	celf1	56	97.872	ENSCHOG00000004196	-	68	97.872	Choloepus_hoffmanni
ENSLOCG00000005966	celf1	95	87.674	ENSCPBG00000022914	CELF1	100	87.500	Chrysemys_picta_bellii
ENSLOCG00000005966	celf1	94	88.153	ENSCANG00000032689	CELF1	100	88.153	Colobus_angolensis_palliatus
ENSLOCG00000005966	celf1	95	85.743	ENSCGRG00001011274	Celf1	95	86.139	Cricetulus_griseus_chok1gshd
ENSLOCG00000005966	celf1	95	85.743	ENSCGRG00000015357	Celf1	95	86.139	Cricetulus_griseus_crigri
ENSLOCG00000005966	celf1	94	75.050	ENSCSEG00000008675	celf1	100	75.050	Cynoglossus_semilaevis
ENSLOCG00000005966	celf1	95	93.638	ENSDARG00000005315	celf1	100	95.858	Danio_rerio
ENSLOCG00000005966	celf1	95	86.139	ENSDNOG00000009523	CELF1	100	87.450	Dasypus_novemcinctus
ENSLOCG00000005966	celf1	95	78.884	ENSDORG00000013721	Celf1	96	78.884	Dipodomys_ordii
ENSLOCG00000005966	celf1	69	95.349	ENSETEG00000004507	CELF1	83	95.349	Echinops_telfairi
ENSLOCG00000005966	celf1	95	78.020	ENSEASG00005010831	CELF1	95	80.000	Equus_asinus_asinus
ENSLOCG00000005966	celf1	95	87.226	ENSECAG00000007741	CELF1	100	87.349	Equus_caballus
ENSLOCG00000005966	celf1	94	71.116	ENSEEUG00000009782	CELF1	100	71.116	Erinaceus_europaeus
ENSLOCG00000005966	celf1	96	93.910	ENSELUG00000023173	celf1	100	94.779	Esox_lucius
ENSLOCG00000005966	celf1	95	86.139	ENSFCAG00000002535	CELF1	100	86.653	Felis_catus
ENSLOCG00000005966	celf1	95	87.873	ENSFALG00000006402	CELF1	95	88.270	Ficedula_albicollis
ENSLOCG00000005966	celf1	95	86.337	ENSFDAG00000008517	CELF1	100	87.052	Fukomys_damarensis
ENSLOCG00000005966	celf1	95	88.800	ENSGMOG00000012783	celf1	99	88.800	Gadus_morhua
ENSLOCG00000005966	celf1	95	88.072	ENSGALG00000008097	CELF1	100	88.600	Gallus_gallus
ENSLOCG00000005966	celf1	96	85.039	ENSGACG00000014226	celf1	96	85.039	Gasterosteus_aculeatus
ENSLOCG00000005966	celf1	94	88.000	ENSGAGG00000011562	CELF1	100	87.400	Gopherus_agassizii
ENSLOCG00000005966	celf1	95	86.931	ENSGGOG00000004106	CELF1	95	87.327	Gorilla_gorilla
ENSLOCG00000005966	celf1	95	87.649	ENSHBUG00000017881	celf1	95	87.450	Haplochromis_burtoni
ENSLOCG00000005966	celf1	94	81.563	ENSHGLG00000019214	-	100	81.563	Heterocephalus_glaber_female
ENSLOCG00000005966	celf1	94	86.853	ENSHGLG00000006909	-	100	87.251	Heterocephalus_glaber_female
ENSLOCG00000005966	celf1	94	86.853	ENSHGLG00100013863	-	100	87.251	Heterocephalus_glaber_male
ENSLOCG00000005966	celf1	94	83.768	ENSHGLG00100017423	-	100	83.166	Heterocephalus_glaber_male
ENSLOCG00000005966	celf1	94	86.826	ENSHCOG00000000258	celf1	100	86.028	Hippocampus_comes
ENSLOCG00000005966	celf1	94	92.385	ENSIPUG00000023708	celf1	100	92.385	Ictalurus_punctatus
ENSLOCG00000005966	celf1	95	86.139	ENSSTOG00000000613	CELF1	100	87.450	Ictidomys_tridecemlineatus
ENSLOCG00000005966	celf1	95	86.139	ENSJJAG00000020280	Celf1	95	86.535	Jaculus_jaculus
ENSLOCG00000005966	celf1	66	85.511	ENSLBEG00000002047	-	98	84.659	Labrus_bergylta
ENSLOCG00000005966	celf1	95	88.048	ENSLBEG00000018296	celf1	94	86.497	Labrus_bergylta
ENSLOCG00000005966	celf1	66	74.515	ENSLACG00000018990	CELF1	88	76.294	Latimeria_chalumnae
ENSLOCG00000005966	celf1	96	85.965	ENSLAFG00000003484	CELF1	97	86.078	Loxodonta_africana
ENSLOCG00000005966	celf1	94	88.153	ENSMFAG00000003505	CELF1	100	88.153	Macaca_fascicularis
ENSLOCG00000005966	celf1	95	88.200	ENSMMUG00000011657	CELF1	99	88.200	Macaca_mulatta
ENSLOCG00000005966	celf1	94	88.153	ENSMNEG00000022558	CELF1	100	88.153	Macaca_nemestrina
ENSLOCG00000005966	celf1	94	88.153	ENSMLEG00000040834	CELF1	100	88.153	Mandrillus_leucophaeus
ENSLOCG00000005966	celf1	94	86.089	ENSMAMG00000010052	celf1	100	86.492	Mastacembelus_armatus
ENSLOCG00000005966	celf1	95	87.649	ENSMZEG00005018307	celf1	100	86.290	Maylandia_zebra
ENSLOCG00000005966	celf1	95	88.469	ENSMGAG00000010629	CELF1	97	87.500	Meleagris_gallopavo
ENSLOCG00000005966	celf1	95	85.743	ENSMAUG00000009468	Celf1	100	87.052	Mesocricetus_auratus
ENSLOCG00000005966	celf1	95	86.931	ENSMICG00000045113	CELF1	95	87.327	Microcebus_murinus
ENSLOCG00000005966	celf1	95	86.535	ENSMOCG00000012633	Celf1	100	87.251	Microtus_ochrogaster
ENSLOCG00000005966	celf1	95	86.546	ENSMMOG00000015460	celf1	95	87.349	Mola_mola
ENSLOCG00000005966	celf1	94	87.251	ENSMODG00000019913	CELF1	100	87.052	Monodelphis_domestica
ENSLOCG00000005966	celf1	94	87.952	MGP_CAROLIEiJ_G0023949	Celf1	100	87.952	Mus_caroli
ENSLOCG00000005966	celf1	94	87.952	ENSMUSG00000005506	Celf1	100	87.952	Mus_musculus
ENSLOCG00000005966	celf1	94	87.952	MGP_PahariEiJ_G0025385	Celf1	100	87.952	Mus_pahari
ENSLOCG00000005966	celf1	94	87.751	MGP_SPRETEiJ_G0024859	Celf1	100	87.751	Mus_spretus
ENSLOCG00000005966	celf1	95	86.139	ENSMPUG00000003960	CELF1	90	85.575	Mustela_putorius_furo
ENSLOCG00000005966	celf1	95	86.220	ENSMLUG00000016631	CELF1	95	86.614	Myotis_lucifugus
ENSLOCG00000005966	celf1	95	82.772	ENSNGAG00000017390	Celf1	95	84.752	Nannospalax_galili
ENSLOCG00000005966	celf1	93	58.097	ENSNBRG00000023547	-	85	58.097	Neolamprologus_brichardi
ENSLOCG00000005966	celf1	94	88.153	ENSNLEG00000014638	CELF1	100	88.153	Nomascus_leucogenys
ENSLOCG00000005966	celf1	94	87.052	ENSMEUG00000007763	CELF1	100	86.853	Notamacropus_eugenii
ENSLOCG00000005966	celf1	94	86.056	ENSOPRG00000003239	-	100	85.857	Ochotona_princeps
ENSLOCG00000005966	celf1	95	86.733	ENSODEG00000015204	CELF1	97	85.742	Octodon_degus
ENSLOCG00000005966	celf1	99	83.955	ENSONIG00000008300	celf1	95	86.879	Oreochromis_niloticus
ENSLOCG00000005966	celf1	95	87.129	ENSOANG00000007896	CELF1	98	85.000	Ornithorhynchus_anatinus
ENSLOCG00000005966	celf1	95	86.139	ENSOCUG00000001311	CELF1	95	86.535	Oryctolagus_cuniculus
ENSLOCG00000005966	celf1	94	82.129	ENSOMEG00000002381	celf1	100	81.928	Oryzias_melastigma
ENSLOCG00000005966	celf1	95	86.417	ENSOGAG00000011600	CELF1	95	86.811	Otolemur_garnettii
ENSLOCG00000005966	celf1	95	86.614	ENSOARG00000006924	CELF1	100	86.853	Ovis_aries
ENSLOCG00000005966	celf1	94	87.052	ENSPPAG00000033870	CELF1	100	87.450	Pan_paniscus
ENSLOCG00000005966	celf1	94	86.853	ENSPPRG00000002376	CELF1	100	86.653	Panthera_pardus
ENSLOCG00000005966	celf1	95	86.139	ENSPTIG00000003974	CELF1	100	86.653	Panthera_tigris_altaica
ENSLOCG00000005966	celf1	95	86.931	ENSPTRG00000052299	CELF1	100	87.450	Pan_troglodytes
ENSLOCG00000005966	celf1	95	86.931	ENSPANG00000021676	CELF1	95	87.327	Papio_anubis
ENSLOCG00000005966	celf1	94	90.927	ENSPKIG00000012324	celf1	100	91.331	Paramormyrops_kingsleyae
ENSLOCG00000005966	celf1	95	83.826	ENSPSIG00000003922	CELF1	95	84.615	Pelodiscus_sinensis
ENSLOCG00000005966	celf1	93	85.057	ENSPMGG00000013192	celf1	96	79.518	Periophthalmus_magnuspinnatus
ENSLOCG00000005966	celf1	95	86.535	ENSPEMG00000015644	Celf1	100	87.251	Peromyscus_maniculatus_bairdii
ENSLOCG00000005966	celf1	95	87.129	ENSPCIG00000022947	CELF1	98	86.614	Phascolarctos_cinereus
ENSLOCG00000005966	celf1	66	72.414	ENSPFOG00000000961	-	100	72.126	Poecilia_formosa
ENSLOCG00000005966	celf1	84	70.339	ENSPLAG00000019373	-	85	69.837	Poecilia_latipinna
ENSLOCG00000005966	celf1	96	75.538	ENSPREG00000022185	-	96	75.147	Poecilia_reticulata
ENSLOCG00000005966	celf1	95	85.178	ENSPPYG00000003302	CELF1	97	84.795	Pongo_abelii
ENSLOCG00000005966	celf1	94	83.865	ENSPCAG00000002631	CELF1	100	85.259	Procavia_capensis
ENSLOCG00000005966	celf1	95	80.792	ENSPCOG00000021865	CELF1	95	83.168	Propithecus_coquereli
ENSLOCG00000005966	celf1	92	85.973	ENSPVAG00000007340	CELF1	100	85.747	Pteropus_vampyrus
ENSLOCG00000005966	celf1	82	78.736	ENSPNYG00000023719	-	88	75.287	Pundamilia_nyererei
ENSLOCG00000005966	celf1	95	93.042	ENSPNAG00000013418	celf1	95	92.157	Pygocentrus_nattereri
ENSLOCG00000005966	celf1	94	86.653	ENSRNOG00000010379	Celf1	100	87.052	Rattus_norvegicus
ENSLOCG00000005966	celf1	95	86.931	ENSRBIG00000042406	CELF1	95	87.327	Rhinopithecus_bieti
ENSLOCG00000005966	celf1	95	86.733	ENSRROG00000032588	CELF1	97	85.742	Rhinopithecus_roxellana
ENSLOCG00000005966	celf1	95	79.042	ENSSBOG00000021912	CELF1	95	79.042	Saimiri_boliviensis_boliviensis
ENSLOCG00000005966	celf1	94	87.649	ENSSHAG00000017438	CELF1	100	88.048	Sarcophilus_harrisii
ENSLOCG00000005966	celf1	95	92.800	ENSSFOG00015019353	celf1	94	92.829	Scleropages_formosus
ENSLOCG00000005966	celf1	99	82.617	ENSSMAG00000013827	celf1	95	86.719	Scophthalmus_maximus
ENSLOCG00000005966	celf1	99	84.112	ENSSDUG00000011558	celf1	95	86.523	Seriola_dumerili
ENSLOCG00000005966	celf1	99	84.299	ENSSLDG00000012863	celf1	95	87.674	Seriola_lalandi_dorsalis
ENSLOCG00000005966	celf1	94	79.681	ENSSARG00000003207	CELF1	100	81.673	Sorex_araneus
ENSLOCG00000005966	celf1	95	87.179	ENSSPUG00000004228	CELF1	95	87.968	Sphenodon_punctatus
ENSLOCG00000005966	celf1	94	88.800	ENSSPAG00000009569	celf1	100	89.200	Stegastes_partitus
ENSLOCG00000005966	celf1	95	86.139	ENSSSCG00000013233	CELF1	100	86.653	Sus_scrofa
ENSLOCG00000005966	celf1	95	86.561	ENSTGUG00000010377	CELF1	95	86.957	Taeniopygia_guttata
ENSLOCG00000005966	celf1	94	68.577	ENSTRUG00000000617	celf1	100	68.577	Takifugu_rubripes
ENSLOCG00000005966	celf1	76	94.702	ENSTBEG00000005140	CELF1	83	94.702	Tupaia_belangeri
ENSLOCG00000005966	celf1	94	86.853	ENSTTRG00000014157	CELF1	100	86.653	Tursiops_truncatus
ENSLOCG00000005966	celf1	85	84.835	ENSUAMG00000000223	CELF1	95	85.275	Ursus_americanus
ENSLOCG00000005966	celf1	95	86.139	ENSUMAG00000009218	CELF1	95	86.535	Ursus_maritimus
ENSLOCG00000005966	celf1	94	74.104	ENSVPAG00000000336	CELF1	100	74.502	Vicugna_pacos
ENSLOCG00000005966	celf1	95	86.139	ENSVVUG00000023439	CELF1	100	86.653	Vulpes_vulpes
ENSLOCG00000005966	celf1	94	84.418	ENSXETG00000009044	celf1	100	83.629	Xenopus_tropicalis
ENSLOCG00000005966	celf1	83	58.974	ENSXCOG00000017706	-	87	61.972	Xiphophorus_couchianus
ENSLOCG00000005966	celf1	94	75.100	ENSXMAG00000029339	-	100	74.900	Xiphophorus_maculatus