EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000005976 (Gene tree)
Gene ID: 102693883
Gene Symbol: r3hdm2
Alias: -
Full Name: R3H domain containing 2
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 23617 bases
Position: chrLG4:15003192-15026808
Accession: 102693883
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000007225	R3H	PF01424.22	2.8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000007233	-	3012	XM_006629259	ENSLOCP00000007225	1003 (aa)	-	W5MFR6

Gene Model

Click here to download ENSLOCG00000005976's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000005976's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000005976	r3hdm2	93	57.072	ENSLOCG00000001641	r3hdm1	89	56.250

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000005976	r3hdm2	100	71.358	ENSG00000179912	R3HDM2	100	70.895	Homo_sapiens
ENSLOCG00000005976	r3hdm2	53	40.138	ENSAPOG00000021873	-	76	41.245	Acanthochromis_polyacanthus
ENSLOCG00000005976	r3hdm2	99	75.849	ENSAPOG00000020341	r3hdm2	99	75.558	Acanthochromis_polyacanthus
ENSLOCG00000005976	r3hdm2	100	68.004	ENSAMEG00000004812	R3HDM2	100	67.787	Ailuropoda_melanoleuca
ENSLOCG00000005976	r3hdm2	93	77.896	ENSACIG00000016146	r3hdm2	98	77.152	Amphilophus_citrinellus
ENSLOCG00000005976	r3hdm2	99	73.403	ENSAOCG00000023694	r3hdm2	99	74.261	Amphiprion_ocellaris
ENSLOCG00000005976	r3hdm2	99	75.752	ENSAPEG00000008851	r3hdm2	99	75.461	Amphiprion_percula
ENSLOCG00000005976	r3hdm2	99	75.242	ENSATEG00000025024	r3hdm2	100	79.433	Anabas_testudineus
ENSLOCG00000005976	r3hdm2	100	61.017	ENSAPLG00000004298	R3HDM2	93	73.882	Anas_platyrhynchos
ENSLOCG00000005976	r3hdm2	100	68.108	ENSACAG00000006388	R3HDM2	100	66.699	Anolis_carolinensis
ENSLOCG00000005976	r3hdm2	98	67.832	ENSANAG00000031310	-	100	67.603	Aotus_nancymaae
ENSLOCG00000005976	r3hdm2	100	71.260	ENSANAG00000025397	-	100	70.600	Aotus_nancymaae
ENSLOCG00000005976	r3hdm2	99	73.830	ENSACLG00000019106	r3hdm2	99	74.499	Astatotilapia_calliptera
ENSLOCG00000005976	r3hdm2	94	66.804	ENSAMXG00000017180	r3hdm2	100	66.871	Astyanax_mexicanus
ENSLOCG00000005976	r3hdm2	100	70.993	ENSBTAG00000018361	R3HDM2	100	70.698	Bos_taurus
ENSLOCG00000005976	r3hdm2	100	71.009	ENSCJAG00000007365	R3HDM2	100	70.796	Callithrix_jacchus
ENSLOCG00000005976	r3hdm2	100	71.373	ENSCAFG00000000215	R3HDM2	100	71.078	Canis_familiaris
ENSLOCG00000005976	r3hdm2	100	71.681	ENSCAFG00020023713	R3HDM2	100	71.386	Canis_lupus_dingo
ENSLOCG00000005976	r3hdm2	100	71.190	ENSCHIG00000014022	R3HDM2	100	70.895	Capra_hircus
ENSLOCG00000005976	r3hdm2	100	70.490	ENSTSYG00000001449	R3HDM2	100	70.127	Carlito_syrichta
ENSLOCG00000005976	r3hdm2	100	71.485	ENSCPOG00000009217	R3HDM2	100	70.698	Cavia_porcellus
ENSLOCG00000005976	r3hdm2	90	70.815	ENSCCAG00000026083	R3HDM2	100	71.018	Cebus_capucinus
ENSLOCG00000005976	r3hdm2	100	71.260	ENSCATG00000036929	R3HDM2	100	70.796	Cercocebus_atys
ENSLOCG00000005976	r3hdm2	100	71.681	ENSCLAG00000011997	R3HDM2	100	71.091	Chinchilla_lanigera
ENSLOCG00000005976	r3hdm2	100	68.436	ENSCSAG00000004911	R3HDM2	100	68.441	Chlorocebus_sabaeus
ENSLOCG00000005976	r3hdm2	70	70.790	ENSCHOG00000005636	R3HDM2	87	68.581	Choloepus_hoffmanni
ENSLOCG00000005976	r3hdm2	100	67.545	ENSCPBG00000013922	R3HDM2	100	66.416	Chrysemys_picta_bellii
ENSLOCG00000005976	r3hdm2	100	70.813	ENSCANG00000043807	R3HDM2	100	70.600	Colobus_angolensis_palliatus
ENSLOCG00000005976	r3hdm2	100	70.501	ENSCGRG00001017324	R3hdm2	100	70.010	Cricetulus_griseus_chok1gshd
ENSLOCG00000005976	r3hdm2	100	68.130	ENSCGRG00000003862	R3hdm2	100	68.134	Cricetulus_griseus_crigri
ENSLOCG00000005976	r3hdm2	99	73.022	ENSCSEG00000010925	r3hdm2	100	75.028	Cynoglossus_semilaevis
ENSLOCG00000005976	r3hdm2	51	33.391	ENSCVAG00000007202	-	51	44.023	Cyprinodon_variegatus
ENSLOCG00000005976	r3hdm2	99	71.851	ENSCVAG00000009058	r3hdm2	99	72.328	Cyprinodon_variegatus
ENSLOCG00000005976	r3hdm2	93	72.410	ENSDARG00000102610	r3hdm2	99	72.545	Danio_rerio
ENSLOCG00000005976	r3hdm2	100	67.766	ENSDNOG00000015033	R3HDM2	100	70.655	Dasypus_novemcinctus
ENSLOCG00000005976	r3hdm2	94	68.905	ENSDORG00000011462	R3hdm2	99	68.951	Dipodomys_ordii
ENSLOCG00000005976	r3hdm2	100	71.190	ENSEASG00005007091	R3HDM2	100	70.993	Equus_asinus_asinus
ENSLOCG00000005976	r3hdm2	100	70.939	ENSECAG00000003157	R3HDM2	100	70.993	Equus_caballus
ENSLOCG00000005976	r3hdm2	96	72.275	ENSELUG00000015969	r3hdm2	100	70.444	Esox_lucius
ENSLOCG00000005976	r3hdm2	100	69.826	ENSFCAG00000000192	R3HDM2	100	68.898	Felis_catus
ENSLOCG00000005976	r3hdm2	90	74.194	ENSFALG00000000255	R3HDM2	100	61.339	Ficedula_albicollis
ENSLOCG00000005976	r3hdm2	100	70.559	ENSFDAG00000019385	R3HDM2	100	70.069	Fukomys_damarensis
ENSLOCG00000005976	r3hdm2	99	73.689	ENSFHEG00000016484	r3hdm2	99	73.858	Fundulus_heteroclitus
ENSLOCG00000005976	r3hdm2	95	69.736	ENSGMOG00000007961	r3hdm2	100	71.372	Gadus_morhua
ENSLOCG00000005976	r3hdm2	100	68.000	ENSGALG00000043736	R3HDM2	100	65.238	Gallus_gallus
ENSLOCG00000005976	r3hdm2	99	72.102	ENSGAFG00000013887	r3hdm2	100	74.224	Gambusia_affinis
ENSLOCG00000005976	r3hdm2	95	72.861	ENSGACG00000006442	r3hdm2	100	74.336	Gasterosteus_aculeatus
ENSLOCG00000005976	r3hdm2	100	67.686	ENSGAGG00000017797	R3HDM2	100	67.464	Gopherus_agassizii
ENSLOCG00000005976	r3hdm2	100	71.260	ENSGGOG00000015007	R3HDM2	100	70.796	Gorilla_gorilla
ENSLOCG00000005976	r3hdm2	100	69.048	ENSHGLG00000010434	-	100	68.316	Heterocephalus_glaber_female
ENSLOCG00000005976	r3hdm2	88	66.038	ENSHGLG00000010421	-	94	63.595	Heterocephalus_glaber_female
ENSLOCG00000005976	r3hdm2	100	71.260	ENSHGLG00100004183	-	100	70.501	Heterocephalus_glaber_male
ENSLOCG00000005976	r3hdm2	96	63.487	ENSHGLG00100018871	-	99	61.744	Heterocephalus_glaber_male
ENSLOCG00000005976	r3hdm2	99	74.529	ENSHCOG00000001142	r3hdm2	96	75.223	Hippocampus_comes
ENSLOCG00000005976	r3hdm2	99	68.872	ENSIPUG00000023873	r3hdm2	99	68.721	Ictalurus_punctatus
ENSLOCG00000005976	r3hdm2	100	68.240	ENSSTOG00000013424	R3HDM2	100	67.748	Ictidomys_tridecemlineatus
ENSLOCG00000005976	r3hdm2	100	69.048	ENSJJAG00000010001	R3hdm2	100	68.571	Jaculus_jaculus
ENSLOCG00000005976	r3hdm2	99	72.556	ENSKMAG00000012695	r3hdm2	99	75.311	Kryptolebias_marmoratus
ENSLOCG00000005976	r3hdm2	99	73.529	ENSLBEG00000013115	r3hdm2	96	73.270	Labrus_bergylta
ENSLOCG00000005976	r3hdm2	52	38.860	ENSLBEG00000002779	-	59	44.920	Labrus_bergylta
ENSLOCG00000005976	r3hdm2	95	66.437	ENSLACG00000019064	r3hdm2	100	64.897	Latimeria_chalumnae
ENSLOCG00000005976	r3hdm2	100	67.884	ENSLAFG00000006510	R3HDM2	100	67.259	Loxodonta_africana
ENSLOCG00000005976	r3hdm2	100	71.457	ENSMFAG00000036385	R3HDM2	100	70.796	Macaca_fascicularis
ENSLOCG00000005976	r3hdm2	100	71.457	ENSMMUG00000021789	R3HDM2	100	70.796	Macaca_mulatta
ENSLOCG00000005976	r3hdm2	100	71.358	ENSMNEG00000025314	R3HDM2	100	70.895	Macaca_nemestrina
ENSLOCG00000005976	r3hdm2	100	71.358	ENSMLEG00000028915	R3HDM2	100	70.895	Mandrillus_leucophaeus
ENSLOCG00000005976	r3hdm2	99	73.549	ENSMAMG00000009793	r3hdm2	99	74.215	Mastacembelus_armatus
ENSLOCG00000005976	r3hdm2	99	73.830	ENSMZEG00005007319	r3hdm2	99	74.499	Maylandia_zebra
ENSLOCG00000005976	r3hdm2	100	71.526	ENSMICG00000012389	R3HDM2	100	71.344	Microcebus_murinus
ENSLOCG00000005976	r3hdm2	100	70.472	ENSMOCG00000014425	R3hdm2	100	69.912	Microtus_ochrogaster
ENSLOCG00000005976	r3hdm2	95	73.787	ENSMMOG00000007448	r3hdm2	99	73.375	Mola_mola
ENSLOCG00000005976	r3hdm2	100	71.288	MGP_CAROLIEiJ_G0015896	R3hdm2	100	69.912	Mus_caroli
ENSLOCG00000005976	r3hdm2	100	71.780	ENSMUSG00000025404	R3hdm2	100	70.600	Mus_musculus
ENSLOCG00000005976	r3hdm2	100	70.965	MGP_PahariEiJ_G0031189	R3hdm2	100	70.206	Mus_pahari
ENSLOCG00000005976	r3hdm2	100	71.611	MGP_SPRETEiJ_G0016722	R3hdm2	100	70.432	Mus_spretus
ENSLOCG00000005976	r3hdm2	98	66.635	ENSMPUG00000001818	R3HDM2	97	66.667	Mustela_putorius_furo
ENSLOCG00000005976	r3hdm2	100	67.914	ENSMLUG00000004980	R3HDM2	100	67.072	Myotis_lucifugus
ENSLOCG00000005976	r3hdm2	100	71.499	ENSNGAG00000018800	R3hdm2	100	70.993	Nannospalax_galili
ENSLOCG00000005976	r3hdm2	94	76.261	ENSNBRG00000004483	r3hdm2	99	76.366	Neolamprologus_brichardi
ENSLOCG00000005976	r3hdm2	100	71.260	ENSNLEG00000017351	R3HDM2	100	70.600	Nomascus_leucogenys
ENSLOCG00000005976	r3hdm2	99	61.308	ENSMEUG00000008588	R3HDM2	100	61.028	Notamacropus_eugenii
ENSLOCG00000005976	r3hdm2	100	64.966	ENSOPRG00000013670	R3HDM2	100	64.145	Ochotona_princeps
ENSLOCG00000005976	r3hdm2	99	76.954	ENSONIG00000005075	r3hdm2	99	77.151	Oreochromis_niloticus
ENSLOCG00000005976	r3hdm2	100	67.379	ENSOCUG00000013258	R3HDM2	100	67.631	Oryctolagus_cuniculus
ENSLOCG00000005976	r3hdm2	99	75.000	ENSORLG00000005502	r3hdm2	96	74.416	Oryzias_latipes
ENSLOCG00000005976	r3hdm2	99	72.521	ENSORLG00020017069	r3hdm2	99	72.849	Oryzias_latipes_hni
ENSLOCG00000005976	r3hdm2	99	72.616	ENSORLG00015012735	r3hdm2	99	72.945	Oryzias_latipes_hsok
ENSLOCG00000005976	r3hdm2	99	69.557	ENSOMEG00000018079	r3hdm2	99	68.966	Oryzias_melastigma
ENSLOCG00000005976	r3hdm2	96	63.739	ENSOGAG00000027966	-	96	64.301	Otolemur_garnettii
ENSLOCG00000005976	r3hdm2	100	66.161	ENSOGAG00000012055	R3HDM2	100	66.192	Otolemur_garnettii
ENSLOCG00000005976	r3hdm2	100	70.341	ENSOARG00000006929	R3HDM2	100	70.490	Ovis_aries
ENSLOCG00000005976	r3hdm2	100	71.358	ENSPPAG00000034395	R3HDM2	100	70.895	Pan_paniscus
ENSLOCG00000005976	r3hdm2	100	71.063	ENSPPRG00000009240	R3HDM2	100	70.669	Panthera_pardus
ENSLOCG00000005976	r3hdm2	100	71.063	ENSPTIG00000008752	R3HDM2	100	70.669	Panthera_tigris_altaica
ENSLOCG00000005976	r3hdm2	100	71.457	ENSPTRG00000046457	R3HDM2	100	70.796	Pan_troglodytes
ENSLOCG00000005976	r3hdm2	98	71.214	ENSPANG00000024002	R3HDM2	99	70.741	Papio_anubis
ENSLOCG00000005976	r3hdm2	99	75.626	ENSPKIG00000003171	r3hdm2	99	75.241	Paramormyrops_kingsleyae
ENSLOCG00000005976	r3hdm2	65	61.769	ENSPSIG00000006954	R3HDM2	100	61.145	Pelodiscus_sinensis
ENSLOCG00000005976	r3hdm2	93	77.167	ENSPMGG00000007061	r3hdm2	99	76.135	Periophthalmus_magnuspinnatus
ENSLOCG00000005976	r3hdm2	100	70.127	ENSPEMG00000015964	R3hdm2	100	69.518	Peromyscus_maniculatus_bairdii
ENSLOCG00000005976	r3hdm2	100	71.980	ENSPCIG00000023841	R3HDM2	100	71.909	Phascolarctos_cinereus
ENSLOCG00000005976	r3hdm2	94	66.383	ENSPFOG00000006077	r3hdm2	93	83.425	Poecilia_formosa
ENSLOCG00000005976	r3hdm2	99	73.786	ENSPLAG00000002971	r3hdm2	99	74.272	Poecilia_latipinna
ENSLOCG00000005976	r3hdm2	99	73.786	ENSPMEG00000005330	r3hdm2	99	74.272	Poecilia_mexicana
ENSLOCG00000005976	r3hdm2	99	73.398	ENSPREG00000008424	r3hdm2	99	73.883	Poecilia_reticulata
ENSLOCG00000005976	r3hdm2	98	65.797	ENSPPYG00000004685	R3HDM2	81	64.970	Pongo_abelii
ENSLOCG00000005976	r3hdm2	86	82.418	ENSPCAG00000014642	R3HDM2	89	85.328	Procavia_capensis
ENSLOCG00000005976	r3hdm2	100	71.583	ENSPCOG00000013201	R3HDM2	100	71.288	Propithecus_coquereli
ENSLOCG00000005976	r3hdm2	100	68.199	ENSPVAG00000003967	R3HDM2	100	67.166	Pteropus_vampyrus
ENSLOCG00000005976	r3hdm2	94	75.236	ENSPNYG00000013479	r3hdm2	100	74.922	Pundamilia_nyererei
ENSLOCG00000005976	r3hdm2	99	71.156	ENSPNAG00000017473	r3hdm2	99	71.156	Pygocentrus_nattereri
ENSLOCG00000005976	r3hdm2	100	70.600	ENSRNOG00000007801	R3hdm2	100	69.745	Rattus_norvegicus
ENSLOCG00000005976	r3hdm2	100	69.291	ENSRBIG00000037403	R3HDM2	100	68.633	Rhinopithecus_bieti
ENSLOCG00000005976	r3hdm2	100	71.457	ENSRROG00000022271	R3HDM2	100	70.796	Rhinopithecus_roxellana
ENSLOCG00000005976	r3hdm2	100	70.911	ENSSBOG00000023547	R3HDM2	100	70.698	Saimiri_boliviensis_boliviensis
ENSLOCG00000005976	r3hdm2	100	66.137	ENSSHAG00000003511	R3HDM2	99	71.744	Sarcophilus_harrisii
ENSLOCG00000005976	r3hdm2	57	36.562	ENSSMAG00000010735	-	56	42.473	Scophthalmus_maximus
ENSLOCG00000005976	r3hdm2	99	74.250	ENSSMAG00000012073	r3hdm2	99	74.347	Scophthalmus_maximus
ENSLOCG00000005976	r3hdm2	99	76.556	ENSSDUG00000019269	r3hdm2	99	76.167	Seriola_dumerili
ENSLOCG00000005976	r3hdm2	99	74.138	ENSSLDG00000005252	r3hdm2	100	74.265	Seriola_lalandi_dorsalis
ENSLOCG00000005976	r3hdm2	93	65.548	ENSSARG00000003958	R3HDM2	94	63.766	Sorex_araneus
ENSLOCG00000005976	r3hdm2	100	65.939	ENSSPUG00000014132	R3HDM2	100	64.801	Sphenodon_punctatus
ENSLOCG00000005976	r3hdm2	99	74.807	ENSSPAG00000022594	r3hdm2	100	74.632	Stegastes_partitus
ENSLOCG00000005976	r3hdm2	100	71.135	ENSSSCG00000026498	R3HDM2	100	71.288	Sus_scrofa
ENSLOCG00000005976	r3hdm2	73	63.857	ENSTGUG00000015881	R3HDM2	100	63.439	Taeniopygia_guttata
ENSLOCG00000005976	r3hdm2	95	73.196	ENSTRUG00000015075	r3hdm2	99	71.546	Takifugu_rubripes
ENSLOCG00000005976	r3hdm2	92	80.371	ENSTNIG00000007057	r3hdm2	88	85.794	Tetraodon_nigroviridis
ENSLOCG00000005976	r3hdm2	81	71.530	ENSTBEG00000015967	R3HDM2	79	71.429	Tupaia_belangeri
ENSLOCG00000005976	r3hdm2	100	57.263	ENSTTRG00000013082	R3HDM2	84	70.115	Tursiops_truncatus
ENSLOCG00000005976	r3hdm2	100	71.752	ENSUAMG00000020913	R3HDM2	100	69.238	Ursus_americanus
ENSLOCG00000005976	r3hdm2	100	68.035	ENSUMAG00000019179	R3HDM2	100	67.840	Ursus_maritimus
ENSLOCG00000005976	r3hdm2	92	76.204	ENSVPAG00000008656	R3HDM2	89	80.255	Vicugna_pacos
ENSLOCG00000005976	r3hdm2	98	68.279	ENSVVUG00000018014	R3HDM2	97	68.411	Vulpes_vulpes
ENSLOCG00000005976	r3hdm2	100	66.176	ENSXETG00000017153	r3hdm2	100	65.392	Xenopus_tropicalis
ENSLOCG00000005976	r3hdm2	86	72.676	ENSXCOG00000013882	r3hdm2	100	73.348	Xiphophorus_couchianus
ENSLOCG00000005976	r3hdm2	99	71.308	ENSXMAG00000017978	r3hdm2	100	73.236	Xiphophorus_maculatus