EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000005992 (Gene tree)
Gene ID: 102695208
Gene Symbol: SNAI2
Alias: SLUG|SLUGH|SLUGH1|SNAIL2
Full Name: snail family transcriptional repressor 2
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 6391 bases
Position: chrLG9:10670620-10677010
Accession: 102695208
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000007240	zf-C2H2	PF00096.26	1.1e-26	1	5
ENSLOCP00000007240	zf-C2H2	PF00096.26	1.1e-26	2	5
ENSLOCP00000007240	zf-C2H2	PF00096.26	1.1e-26	3	5
ENSLOCP00000007240	zf-C2H2	PF00096.26	1.1e-26	4	5
ENSLOCP00000007240	zf-C2H2	PF00096.26	1.1e-26	5	5
ENSLOCP00000007240	zf-met	PF12874.7	2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000007248	SNAI2-201	5299	XM_006633933	ENSLOCP00000007240	268 (aa)	XP_006633996	W5MFT1

Gene Model

Click here to download ENSLOCG00000005992's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000005992's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000005992	SNAI2	79	33.577	ENSLOCG00000003678	znf319b	78	34.906
ENSLOCG00000005992	SNAI2	50	36.975	ENSLOCG00000004661	-	99	36.975
ENSLOCG00000005992	SNAI2	62	36.496	ENSLOCG00000004208	-	99	36.496
ENSLOCG00000005992	SNAI2	99	42.086	ENSLOCG00000007573	scrt1b	95	41.667
ENSLOCG00000005992	SNAI2	79	33.577	ENSLOCG00000000544	znf319b	78	34.906
ENSLOCG00000005992	SNAI2	99	54.982	ENSLOCG00000004443	snai1a	99	54.982
ENSLOCG00000005992	SNAI2	57	40.541	ENSLOCG00000014144	-	99	36.719
ENSLOCG00000005992	SNAI2	53	41.353	ENSLOCG00000017864	-	97	41.353
ENSLOCG00000005992	SNAI2	56	38.947	ENSLOCG00000000714	-	90	35.433
ENSLOCG00000005992	SNAI2	50	38.596	ENSLOCG00000017422	-	70	38.596
ENSLOCG00000005992	SNAI2	75	40.146	ENSLOCG00000009778	prdm5	77	40.146
ENSLOCG00000005992	SNAI2	50	40.952	ENSLOCG00000017736	znf648	59	40.952
ENSLOCG00000005992	SNAI2	84	51.515	ENSLOCG00000003926	znf236	52	51.515
ENSLOCG00000005992	SNAI2	50	35.577	ENSLOCG00000018285	-	100	35.577
ENSLOCG00000005992	SNAI2	69	37.500	ENSLOCG00000016466	-	98	38.182
ENSLOCG00000005992	SNAI2	52	85.000	ENSLOCG00000004887	SNAI3	91	81.879
ENSLOCG00000005992	SNAI2	59	46.914	ENSLOCG00000014366	-	92	46.914

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000005992	SNAI2	100	86.567	ENSG00000019549	SNAI2	100	86.567	Homo_sapiens
ENSLOCG00000005992	SNAI2	99	49.315	ENSG00000185669	SNAI3	99	48.148	Homo_sapiens
ENSLOCG00000005992	SNAI2	100	87.687	ENSAMEG00000009606	SNAI2	100	87.687	Ailuropoda_melanoleuca
ENSLOCG00000005992	SNAI2	99	48.973	ENSANAG00000032748	SNAI3	99	49.315	Aotus_nancymaae
ENSLOCG00000005992	SNAI2	100	86.567	ENSANAG00000021163	SNAI2	100	86.567	Aotus_nancymaae
ENSLOCG00000005992	SNAI2	100	86.194	ENSBTAG00000013227	SNAI2	100	86.194	Bos_taurus
ENSLOCG00000005992	SNAI2	99	46.284	ENSBTAG00000017528	SNAI3	99	46.284	Bos_taurus
ENSLOCG00000005992	SNAI2	100	86.567	ENSCJAG00000013499	SNAI2	100	86.567	Callithrix_jacchus
ENSLOCG00000005992	SNAI2	100	86.940	ENSCAFG00000006638	SNAI2	100	86.940	Canis_familiaris
ENSLOCG00000005992	SNAI2	99	47.586	ENSCAFG00000029458	SNAI3	99	47.260	Canis_familiaris
ENSLOCG00000005992	SNAI2	100	86.940	ENSCAFG00020015384	SNAI2	100	86.940	Canis_lupus_dingo
ENSLOCG00000005992	SNAI2	99	47.931	ENSCAFG00020004719	SNAI3	99	47.603	Canis_lupus_dingo
ENSLOCG00000005992	SNAI2	99	45.946	ENSCHIG00000018087	SNAI3	99	45.238	Capra_hircus
ENSLOCG00000005992	SNAI2	100	85.821	ENSCHIG00000024410	SNAI2	100	85.821	Capra_hircus
ENSLOCG00000005992	SNAI2	53	71.333	ENSTSYG00000025594	SNAI3	52	71.333	Carlito_syrichta
ENSLOCG00000005992	SNAI2	90	86.722	ENSTSYG00000030892	SNAI2	90	86.722	Carlito_syrichta
ENSLOCG00000005992	SNAI2	83	86.996	ENSCAPG00000013078	SNAI2	100	86.996	Cavia_aperea
ENSLOCG00000005992	SNAI2	100	86.567	ENSCCAG00000024100	SNAI2	100	86.567	Cebus_capucinus
ENSLOCG00000005992	SNAI2	99	51.027	ENSCATG00000031714	SNAI3	99	50.342	Cercocebus_atys
ENSLOCG00000005992	SNAI2	100	86.567	ENSCATG00000028656	SNAI2	100	86.567	Cercocebus_atys
ENSLOCG00000005992	SNAI2	100	87.687	ENSCLAG00000011797	SNAI2	100	87.687	Chinchilla_lanigera
ENSLOCG00000005992	SNAI2	100	86.567	ENSCSAG00000014787	SNAI2	100	86.567	Chlorocebus_sabaeus
ENSLOCG00000005992	SNAI2	100	89.179	ENSCPBG00000020255	SNAI2	100	89.179	Chrysemys_picta_bellii
ENSLOCG00000005992	SNAI2	99	52.542	ENSCPBG00000023474	SNAI3	99	52.542	Chrysemys_picta_bellii
ENSLOCG00000005992	SNAI2	50	64.179	ENSCSAVG00000009819	-	69	64.179	Ciona_savignyi
ENSLOCG00000005992	SNAI2	100	86.567	ENSCANG00000029656	SNAI2	100	86.567	Colobus_angolensis_palliatus
ENSLOCG00000005992	SNAI2	100	86.194	ENSCGRG00001013674	Snai2	100	86.194	Cricetulus_griseus_chok1gshd
ENSLOCG00000005992	SNAI2	99	47.241	ENSCGRG00001011389	Snai3	99	47.552	Cricetulus_griseus_chok1gshd
ENSLOCG00000005992	SNAI2	99	47.241	ENSCGRG00000014932	Snai3	99	47.552	Cricetulus_griseus_crigri
ENSLOCG00000005992	SNAI2	100	86.194	ENSCGRG00000012119	Snai2	100	86.194	Cricetulus_griseus_crigri
ENSLOCG00000005992	SNAI2	78	36.866	ENSDNOG00000035204	-	100	33.906	Dasypus_novemcinctus
ENSLOCG00000005992	SNAI2	100	84.701	ENSDORG00000029620	Snai2	100	84.701	Dipodomys_ordii
ENSLOCG00000005992	SNAI2	99	47.826	ENSECAG00000012131	SNAI3	99	47.020	Equus_caballus
ENSLOCG00000005992	SNAI2	99	46.909	ENSEEUG00000000841	SNAI3	99	45.583	Erinaceus_europaeus
ENSLOCG00000005992	SNAI2	99	54.895	ENSELUG00000018742	-	99	54.895	Esox_lucius
ENSLOCG00000005992	SNAI2	100	88.433	ENSELUG00000021795	SNAI2	79	87.313	Esox_lucius
ENSLOCG00000005992	SNAI2	99	46.619	ENSFCAG00000043885	SNAI3	99	45.878	Felis_catus
ENSLOCG00000005992	SNAI2	89	62.605	ENSFALG00000012974	-	98	64.583	Ficedula_albicollis
ENSLOCG00000005992	SNAI2	100	86.940	ENSFDAG00000016958	SNAI2	100	86.940	Fukomys_damarensis
ENSLOCG00000005992	SNAI2	99	51.890	ENSGAGG00000023571	SNAI3	99	51.333	Gopherus_agassizii
ENSLOCG00000005992	SNAI2	100	89.179	ENSGAGG00000000426	SNAI2	100	89.179	Gopherus_agassizii
ENSLOCG00000005992	SNAI2	100	86.567	ENSGGOG00000000959	SNAI2	100	86.567	Gorilla_gorilla
ENSLOCG00000005992	SNAI2	99	49.829	ENSGGOG00000012559	SNAI3	99	49.658	Gorilla_gorilla
ENSLOCG00000005992	SNAI2	100	76.208	ENSHCOG00000019435	SNAI2	100	77.695	Hippocampus_comes
ENSLOCG00000005992	SNAI2	100	71.786	ENSIPUG00000000131	snai2	100	71.786	Ictalurus_punctatus
ENSLOCG00000005992	SNAI2	100	86.940	ENSSTOG00000028743	SNAI2	100	86.940	Ictidomys_tridecemlineatus
ENSLOCG00000005992	SNAI2	99	48.123	ENSJJAG00000019934	Snai3	99	47.945	Jaculus_jaculus
ENSLOCG00000005992	SNAI2	99	54.613	ENSLAFG00000005117	SNAI3	99	54.613	Loxodonta_africana
ENSLOCG00000005992	SNAI2	100	87.687	ENSLAFG00000009299	SNAI2	100	87.687	Loxodonta_africana
ENSLOCG00000005992	SNAI2	99	50.000	ENSMFAG00000032064	SNAI3	99	49.834	Macaca_fascicularis
ENSLOCG00000005992	SNAI2	100	86.567	ENSMFAG00000046061	SNAI2	100	86.567	Macaca_fascicularis
ENSLOCG00000005992	SNAI2	99	50.000	ENSMMUG00000008716	SNAI3	99	49.834	Macaca_mulatta
ENSLOCG00000005992	SNAI2	100	86.567	ENSMMUG00000016195	SNAI2	100	86.567	Macaca_mulatta
ENSLOCG00000005992	SNAI2	99	51.712	ENSMNEG00000045515	SNAI3	99	51.027	Macaca_nemestrina
ENSLOCG00000005992	SNAI2	100	86.567	ENSMNEG00000034216	SNAI2	100	86.567	Macaca_nemestrina
ENSLOCG00000005992	SNAI2	100	86.567	ENSMLEG00000034407	SNAI2	100	86.567	Mandrillus_leucophaeus
ENSLOCG00000005992	SNAI2	99	45.918	ENSMAUG00000001685	Snai3	99	46.831	Mesocricetus_auratus
ENSLOCG00000005992	SNAI2	100	85.821	ENSMAUG00000008119	Snai2	100	85.821	Mesocricetus_auratus
ENSLOCG00000005992	SNAI2	100	85.821	ENSMOCG00000006622	Snai2	100	85.821	Microtus_ochrogaster
ENSLOCG00000005992	SNAI2	99	47.917	ENSMOCG00000003536	Snai3	99	47.917	Microtus_ochrogaster
ENSLOCG00000005992	SNAI2	100	89.179	ENSMODG00000010173	SNAI2	100	89.179	Monodelphis_domestica
ENSLOCG00000005992	SNAI2	99	46.713	MGP_CAROLIEiJ_G0031662	Snai3	99	46.367	Mus_caroli
ENSLOCG00000005992	SNAI2	100	86.245	MGP_CAROLIEiJ_G0020483	Snai2	100	86.245	Mus_caroli
ENSLOCG00000005992	SNAI2	100	86.617	ENSMUSG00000022676	Snai2	100	86.617	Mus_musculus
ENSLOCG00000005992	SNAI2	99	47.059	ENSMUSG00000006587	Snai3	99	46.713	Mus_musculus
ENSLOCG00000005992	SNAI2	100	86.245	MGP_PahariEiJ_G0016188	Snai2	100	86.245	Mus_pahari
ENSLOCG00000005992	SNAI2	99	47.079	MGP_PahariEiJ_G0023260	Snai3	99	46.918	Mus_pahari
ENSLOCG00000005992	SNAI2	99	47.059	MGP_SPRETEiJ_G0032780	Snai3	99	46.713	Mus_spretus
ENSLOCG00000005992	SNAI2	100	86.617	MGP_SPRETEiJ_G0021379	Snai2	100	86.617	Mus_spretus
ENSLOCG00000005992	SNAI2	99	47.917	ENSMPUG00000008104	SNAI3	99	47.423	Mustela_putorius_furo
ENSLOCG00000005992	SNAI2	100	87.687	ENSMPUG00000010793	SNAI2	100	87.687	Mustela_putorius_furo
ENSLOCG00000005992	SNAI2	100	85.821	ENSMLUG00000001086	SNAI2	100	85.821	Myotis_lucifugus
ENSLOCG00000005992	SNAI2	99	48.797	ENSNGAG00000023039	Snai3	99	48.454	Nannospalax_galili
ENSLOCG00000005992	SNAI2	100	86.194	ENSNLEG00000013421	SNAI2	100	86.194	Nomascus_leucogenys
ENSLOCG00000005992	SNAI2	99	51.027	ENSNLEG00000000595	SNAI3	99	50.685	Nomascus_leucogenys
ENSLOCG00000005992	SNAI2	97	89.655	ENSMEUG00000009510	SNAI2	100	89.655	Notamacropus_eugenii
ENSLOCG00000005992	SNAI2	100	88.060	ENSOANG00000007267	SNAI2	100	88.060	Ornithorhynchus_anatinus
ENSLOCG00000005992	SNAI2	99	49.129	ENSOGAG00000000419	SNAI3	99	47.797	Otolemur_garnettii
ENSLOCG00000005992	SNAI2	100	85.821	ENSOARG00000013030	SNAI2	100	85.821	Ovis_aries
ENSLOCG00000005992	SNAI2	100	86.567	ENSPPAG00000015662	SNAI2	100	86.567	Pan_paniscus
ENSLOCG00000005992	SNAI2	99	49.488	ENSPPAG00000043301	SNAI3	99	49.315	Pan_paniscus
ENSLOCG00000005992	SNAI2	100	88.060	ENSPPRG00000012562	-	100	88.060	Panthera_pardus
ENSLOCG00000005992	SNAI2	99	45.652	ENSPPRG00000008511	SNAI3	99	45.683	Panthera_pardus
ENSLOCG00000005992	SNAI2	90	88.017	ENSPTIG00000007593	SNAI2	77	88.017	Panthera_tigris_altaica
ENSLOCG00000005992	SNAI2	99	49.829	ENSPTRG00000008460	SNAI3	99	49.658	Pan_troglodytes
ENSLOCG00000005992	SNAI2	100	86.567	ENSPTRG00000020235	SNAI2	100	86.567	Pan_troglodytes
ENSLOCG00000005992	SNAI2	99	51.370	ENSPANG00000000509	SNAI3	99	50.685	Papio_anubis
ENSLOCG00000005992	SNAI2	100	86.567	ENSPANG00000017540	SNAI2	100	86.567	Papio_anubis
ENSLOCG00000005992	SNAI2	99	53.667	ENSPKIG00000007872	SNAI3	99	53.667	Paramormyrops_kingsleyae
ENSLOCG00000005992	SNAI2	100	91.418	ENSPKIG00000002254	SNAI2	100	91.418	Paramormyrops_kingsleyae
ENSLOCG00000005992	SNAI2	62	71.257	ENSPSIG00000004262	SNAI3	56	80.282	Pelodiscus_sinensis
ENSLOCG00000005992	SNAI2	100	88.806	ENSPSIG00000016395	SNAI2	100	88.806	Pelodiscus_sinensis
ENSLOCG00000005992	SNAI2	100	83.955	ENSPMGG00000013179	SNAI2	100	82.463	Periophthalmus_magnuspinnatus
ENSLOCG00000005992	SNAI2	100	85.821	ENSPEMG00000011739	Snai2	100	85.821	Peromyscus_maniculatus_bairdii
ENSLOCG00000005992	SNAI2	100	89.552	ENSPCIG00000025156	SNAI2	100	89.552	Phascolarctos_cinereus
ENSLOCG00000005992	SNAI2	90	85.950	ENSPREG00000008528	SNAI2	86	84.298	Poecilia_reticulata
ENSLOCG00000005992	SNAI2	99	50.000	ENSPPYG00000007643	SNAI3	99	50.345	Pongo_abelii
ENSLOCG00000005992	SNAI2	100	86.567	ENSPPYG00000018578	SNAI2	100	86.567	Pongo_abelii
ENSLOCG00000005992	SNAI2	100	87.313	ENSPCOG00000015656	SNAI2	100	87.313	Propithecus_coquereli
ENSLOCG00000005992	SNAI2	100	87.313	ENSPVAG00000009457	SNAI2	100	87.313	Pteropus_vampyrus
ENSLOCG00000005992	SNAI2	99	47.119	ENSRNOG00000013586	Snai3	99	47.079	Rattus_norvegicus
ENSLOCG00000005992	SNAI2	99	51.712	ENSRBIG00000025770	SNAI3	99	51.027	Rhinopithecus_bieti
ENSLOCG00000005992	SNAI2	100	86.567	ENSRBIG00000041133	SNAI2	100	86.567	Rhinopithecus_bieti
ENSLOCG00000005992	SNAI2	99	51.370	ENSRROG00000032757	SNAI3	99	49.834	Rhinopithecus_roxellana
ENSLOCG00000005992	SNAI2	100	86.567	ENSRROG00000032273	SNAI2	100	86.567	Rhinopithecus_roxellana
ENSLOCG00000005992	SNAI2	100	86.567	ENSSBOG00000035774	SNAI2	100	86.567	Saimiri_boliviensis_boliviensis
ENSLOCG00000005992	SNAI2	100	89.552	ENSSHAG00000004205	SNAI2	100	89.552	Sarcophilus_harrisii
ENSLOCG00000005992	SNAI2	99	50.820	ENSSFOG00015016115	snai3	93	50.980	Scleropages_formosus
ENSLOCG00000005992	SNAI2	100	89.630	ENSSFOG00015018025	SNAI2	100	89.630	Scleropages_formosus
ENSLOCG00000005992	SNAI2	100	88.806	ENSSPUG00000005427	-	100	88.806	Sphenodon_punctatus
ENSLOCG00000005992	SNAI2	100	86.194	ENSSSCG00000039568	SNAI2	100	86.194	Sus_scrofa
ENSLOCG00000005992	SNAI2	99	44.983	ENSTTRG00000006262	SNAI3	99	44.983	Tursiops_truncatus
ENSLOCG00000005992	SNAI2	99	50.000	ENSUAMG00000020030	SNAI3	99	48.333	Ursus_americanus
ENSLOCG00000005992	SNAI2	86	88.261	ENSUAMG00000014942	SNAI2	100	88.261	Ursus_americanus
ENSLOCG00000005992	SNAI2	98	87.072	ENSUMAG00000006525	SNAI2	100	87.072	Ursus_maritimus
ENSLOCG00000005992	SNAI2	99	48.288	ENSVVUG00000003233	SNAI3	99	47.423	Vulpes_vulpes
ENSLOCG00000005992	SNAI2	100	87.313	ENSVVUG00000017625	SNAI2	100	87.313	Vulpes_vulpes
ENSLOCG00000005992	SNAI2	100	88.060	ENSXETG00000024006	snai2	100	88.060	Xenopus_tropicalis