EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLOCG00000006127 (Gene tree)
Gene ID: 102688274
Gene Symbol: pus1
Alias: wu:fb98h11|zgc:103516
Full Name: pseudouridine synthase 1
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 5256 bases
Position: chrLG20:8247777-8253032
Accession: 102688274
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000007404	PseudoU_synth_1	PF01416.20	2.4e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000007412	-	2074	XM_006640389	ENSLOCP00000007404	396 (aa)	XP_006640452	W5MG95

Gene Model

Click here to download ENSLOCG00000006127's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000006127's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000006127	pus1	92	75.000	ENSG00000177192	PUS1	91	76.857	Homo_sapiens
ENSLOCG00000006127	pus1	96	69.474	ENSAPOG00000007254	pus1	90	69.474	Acanthochromis_polyacanthus
ENSLOCG00000006127	pus1	87	77.746	ENSAMEG00000013715	PUS1	84	77.746	Ailuropoda_melanoleuca
ENSLOCG00000006127	pus1	96	70.000	ENSACIG00000009169	pus1	91	70.000	Amphilophus_citrinellus
ENSLOCG00000006127	pus1	100	69.521	ENSAOCG00000022207	pus1	93	69.521	Amphiprion_ocellaris
ENSLOCG00000006127	pus1	100	69.270	ENSAPEG00000006039	pus1	100	69.270	Amphiprion_percula
ENSLOCG00000006127	pus1	96	69.474	ENSATEG00000020688	pus1	97	69.474	Anabas_testudineus
ENSLOCG00000006127	pus1	90	73.743	ENSACAG00000007367	PUS1	96	73.743	Anolis_carolinensis
ENSLOCG00000006127	pus1	82	75.617	ENSANAG00000036192	PUS1	99	75.617	Aotus_nancymaae
ENSLOCG00000006127	pus1	96	70.789	ENSACLG00000020868	pus1	97	70.789	Astatotilapia_calliptera
ENSLOCG00000006127	pus1	96	71.842	ENSAMXG00000008710	pus1	86	71.842	Astyanax_mexicanus
ENSLOCG00000006127	pus1	91	76.323	ENSBTAG00000012990	PUS1	89	76.323	Bos_taurus
ENSLOCG00000006127	pus1	81	40.299	WBGene00004248	pus-1	79	40.299	Caenorhabditis_elegans
ENSLOCG00000006127	pus1	64	79.051	ENSCJAG00000003720	PUS1	74	75.092	Callithrix_jacchus
ENSLOCG00000006127	pus1	91	74.652	ENSCAFG00000006429	PUS1	90	74.652	Canis_familiaris
ENSLOCG00000006127	pus1	91	74.652	ENSCAFG00020010737	PUS1	83	74.652	Canis_lupus_dingo
ENSLOCG00000006127	pus1	91	76.045	ENSCHIG00000000487	PUS1	89	76.045	Capra_hircus
ENSLOCG00000006127	pus1	82	80.982	ENSTSYG00000032605	PUS1	95	77.273	Carlito_syrichta
ENSLOCG00000006127	pus1	75	79.530	ENSCAPG00000006421	PUS1	99	75.309	Cavia_aperea
ENSLOCG00000006127	pus1	89	74.648	ENSCPOG00000001027	PUS1	91	70.361	Cavia_porcellus
ENSLOCG00000006127	pus1	85	78.107	ENSCCAG00000015879	PUS1	90	75.767	Cebus_capucinus
ENSLOCG00000006127	pus1	92	74.451	ENSCATG00000032870	PUS1	89	75.767	Cercocebus_atys
ENSLOCG00000006127	pus1	83	78.287	ENSCLAG00000011689	PUS1	84	74.648	Chinchilla_lanigera
ENSLOCG00000006127	pus1	92	74.451	ENSCSAG00000001879	PUS1	84	74.451	Chlorocebus_sabaeus
ENSLOCG00000006127	pus1	79	81.150	ENSCPBG00000024715	PUS1	93	78.834	Chrysemys_picta_bellii
ENSLOCG00000006127	pus1	87	46.064	ENSCING00000009426	-	91	46.064	Ciona_intestinalis
ENSLOCG00000006127	pus1	92	42.700	ENSCSAVG00000003751	-	75	42.700	Ciona_savignyi
ENSLOCG00000006127	pus1	92	66.484	ENSCANG00000035561	PUS1	89	68.693	Colobus_angolensis_palliatus
ENSLOCG00000006127	pus1	97	73.575	ENSCGRG00001019592	Pus1	90	73.575	Cricetulus_griseus_chok1gshd
ENSLOCG00000006127	pus1	97	73.575	ENSCGRG00000004048	Pus1	97	73.575	Cricetulus_griseus_crigri
ENSLOCG00000006127	pus1	96	68.947	ENSCSEG00000003629	pus1	90	68.947	Cynoglossus_semilaevis
ENSLOCG00000006127	pus1	92	71.429	ENSCVAG00000001265	pus1	87	71.429	Cyprinodon_variegatus
ENSLOCG00000006127	pus1	96	67.363	ENSDARG00000045562	pus1	98	71.062	Danio_rerio
ENSLOCG00000006127	pus1	91	72.576	ENSDNOG00000045576	PUS1	98	74.375	Dasypus_novemcinctus
ENSLOCG00000006127	pus1	82	76.543	ENSDORG00000011455	Pus1	99	76.543	Dipodomys_ordii
ENSLOCG00000006127	pus1	88	47.025	FBgn0038811	PUS1	84	47.025	Drosophila_melanogaster
ENSLOCG00000006127	pus1	85	75.821	ENSETEG00000019160	PUS1	82	75.444	Echinops_telfairi
ENSLOCG00000006127	pus1	83	43.466	ENSEBUG00000000368	-	66	43.380	Eptatretus_burgeri
ENSLOCG00000006127	pus1	91	74.238	ENSEASG00005016535	PUS1	82	74.238	Equus_asinus_asinus
ENSLOCG00000006127	pus1	91	74.238	ENSECAG00000006965	PUS1	89	74.238	Equus_caballus
ENSLOCG00000006127	pus1	95	73.351	ENSELUG00000010424	pus1	96	73.351	Esox_lucius
ENSLOCG00000006127	pus1	85	78.402	ENSFCAG00000010780	PUS1	80	78.402	Felis_catus
ENSLOCG00000006127	pus1	92	76.712	ENSFALG00000008273	PUS1	85	76.712	Ficedula_albicollis
ENSLOCG00000006127	pus1	91	73.425	ENSFDAG00000012518	PUS1	94	69.744	Fukomys_damarensis
ENSLOCG00000006127	pus1	97	70.390	ENSFHEG00000010504	pus1	91	70.390	Fundulus_heteroclitus
ENSLOCG00000006127	pus1	96	67.885	ENSGMOG00000008143	pus1	96	67.885	Gadus_morhua
ENSLOCG00000006127	pus1	89	76.068	ENSGALG00000002354	PUS1	86	76.068	Gallus_gallus
ENSLOCG00000006127	pus1	97	68.312	ENSGAFG00000006578	pus1	91	68.312	Gambusia_affinis
ENSLOCG00000006127	pus1	97	68.394	ENSGACG00000017566	pus1	98	68.394	Gasterosteus_aculeatus
ENSLOCG00000006127	pus1	83	78.723	ENSGAGG00000016730	-	94	78.723	Gopherus_agassizii
ENSLOCG00000006127	pus1	92	75.824	ENSGGOG00000009178	PUS1	87	77.301	Gorilla_gorilla
ENSLOCG00000006127	pus1	96	71.053	ENSHBUG00000001316	pus1	97	71.053	Haplochromis_burtoni
ENSLOCG00000006127	pus1	89	72.805	ENSHGLG00000016086	PUS1	90	72.805	Heterocephalus_glaber_female
ENSLOCG00000006127	pus1	89	72.521	ENSHGLG00100019362	PUS1	90	72.521	Heterocephalus_glaber_male
ENSLOCG00000006127	pus1	97	66.580	ENSHCOG00000014288	pus1	88	66.580	Hippocampus_comes
ENSLOCG00000006127	pus1	89	78.063	ENSIPUG00000010387	pus1	85	79.880	Ictalurus_punctatus
ENSLOCG00000006127	pus1	94	74.124	ENSSTOG00000011245	PUS1	90	72.021	Ictidomys_tridecemlineatus
ENSLOCG00000006127	pus1	88	78.386	ENSJJAG00000000088	Pus1	82	78.386	Jaculus_jaculus
ENSLOCG00000006127	pus1	97	68.912	ENSKMAG00000012702	pus1	92	68.912	Kryptolebias_marmoratus
ENSLOCG00000006127	pus1	97	68.490	ENSLBEG00000002845	pus1	94	68.490	Labrus_bergylta
ENSLOCG00000006127	pus1	92	73.901	ENSLACG00000018598	PUS1	96	71.688	Latimeria_chalumnae
ENSLOCG00000006127	pus1	81	57.632	ENSLACG00000016044	-	97	57.632	Latimeria_chalumnae
ENSLOCG00000006127	pus1	86	73.314	ENSLAFG00000028731	PUS1	92	73.314	Loxodonta_africana
ENSLOCG00000006127	pus1	92	74.451	ENSMFAG00000041194	PUS1	89	75.767	Macaca_fascicularis
ENSLOCG00000006127	pus1	88	76.857	ENSMMUG00000031463	PUS1	89	78.526	Macaca_mulatta
ENSLOCG00000006127	pus1	92	74.725	ENSMNEG00000002814	PUS1	89	76.074	Macaca_nemestrina
ENSLOCG00000006127	pus1	82	76.235	ENSMLEG00000043560	PUS1	99	76.235	Mandrillus_leucophaeus
ENSLOCG00000006127	pus1	96	70.526	ENSMAMG00000007371	pus1	90	70.526	Mastacembelus_armatus
ENSLOCG00000006127	pus1	96	71.053	ENSMZEG00005017746	pus1	90	71.053	Maylandia_zebra
ENSLOCG00000006127	pus1	82	77.090	ENSMGAG00000001958	PUS1	98	77.090	Meleagris_gallopavo
ENSLOCG00000006127	pus1	97	73.316	ENSMAUG00000001482	Pus1	90	73.316	Mesocricetus_auratus
ENSLOCG00000006127	pus1	87	77.843	ENSMICG00000030980	PUS1	87	77.011	Microcebus_murinus
ENSLOCG00000006127	pus1	97	73.575	ENSMOCG00000022311	Pus1	90	73.575	Microtus_ochrogaster
ENSLOCG00000006127	pus1	94	68.633	ENSMMOG00000021022	pus1	94	69.459	Mola_mola
ENSLOCG00000006127	pus1	85	74.212	ENSMODG00000015551	PUS1	82	72.678	Monodelphis_domestica
ENSLOCG00000006127	pus1	95	68.865	ENSMALG00000013202	pus1	91	68.783	Monopterus_albus
ENSLOCG00000006127	pus1	97	71.762	MGP_CAROLIEiJ_G0027551	Pus1	98	71.762	Mus_caroli
ENSLOCG00000006127	pus1	97	71.762	ENSMUSG00000029507	Pus1	98	71.762	Mus_musculus
ENSLOCG00000006127	pus1	92	74.725	MGP_PahariEiJ_G0024133	Pus1	85	79.580	Mus_pahari
ENSLOCG00000006127	pus1	97	71.762	MGP_SPRETEiJ_G0028549	Pus1	98	71.762	Mus_spretus
ENSLOCG00000006127	pus1	82	80.982	ENSMPUG00000002314	PUS1	83	80.982	Mustela_putorius_furo
ENSLOCG00000006127	pus1	88	75.143	ENSMLUG00000015790	PUS1	95	75.143	Myotis_lucifugus
ENSLOCG00000006127	pus1	98	72.237	ENSNGAG00000012976	Pus1	91	72.237	Nannospalax_galili
ENSLOCG00000006127	pus1	96	70.789	ENSNBRG00000020502	pus1	99	70.557	Neolamprologus_brichardi
ENSLOCG00000006127	pus1	92	72.802	ENSNLEG00000008505	PUS1	99	76.190	Nomascus_leucogenys
ENSLOCG00000006127	pus1	91	66.213	ENSMEUG00000002825	PUS1	99	66.213	Notamacropus_eugenii
ENSLOCG00000006127	pus1	92	65.934	ENSOPRG00000002701	-	95	65.934	Ochotona_princeps
ENSLOCG00000006127	pus1	88	75.284	ENSODEG00000008248	PUS1	90	76.765	Octodon_degus
ENSLOCG00000006127	pus1	96	69.870	ENSONIG00000003803	pus1	96	69.870	Oreochromis_niloticus
ENSLOCG00000006127	pus1	91	75.691	ENSOANG00000010619	PUS1	90	72.010	Ornithorhynchus_anatinus
ENSLOCG00000006127	pus1	81	80.374	ENSOCUG00000007310	PUS1	73	78.274	Oryctolagus_cuniculus
ENSLOCG00000006127	pus1	96	68.912	ENSORLG00000010787	pus1	90	68.912	Oryzias_latipes
ENSLOCG00000006127	pus1	96	69.430	ENSORLG00020011483	pus1	90	69.430	Oryzias_latipes_hni
ENSLOCG00000006127	pus1	96	69.430	ENSORLG00015023012	pus1	96	69.430	Oryzias_latipes_hsok
ENSLOCG00000006127	pus1	92	71.858	ENSOMEG00000022655	pus1	85	71.858	Oryzias_melastigma
ENSLOCG00000006127	pus1	93	74.932	ENSOGAG00000008720	PUS1	95	74.932	Otolemur_garnettii
ENSLOCG00000006127	pus1	91	75.766	ENSOARG00000013316	PUS1	82	75.766	Ovis_aries
ENSLOCG00000006127	pus1	92	75.000	ENSPPAG00000040971	PUS1	87	76.380	Pan_paniscus
ENSLOCG00000006127	pus1	85	78.402	ENSPPRG00000015456	PUS1	86	78.402	Panthera_pardus
ENSLOCG00000006127	pus1	82	80.000	ENSPTIG00000004201	PUS1	88	78.571	Panthera_tigris_altaica
ENSLOCG00000006127	pus1	92	75.000	ENSPTRG00000005643	PUS1	87	76.380	Pan_troglodytes
ENSLOCG00000006127	pus1	92	74.725	ENSPANG00000000376	PUS1	89	76.074	Papio_anubis
ENSLOCG00000006127	pus1	95	76.579	ENSPKIG00000019369	pus1	91	74.314	Paramormyrops_kingsleyae
ENSLOCG00000006127	pus1	91	77.839	ENSPSIG00000016432	PUS1	89	75.457	Pelodiscus_sinensis
ENSLOCG00000006127	pus1	94	67.914	ENSPMGG00000004522	pus1	94	69.126	Periophthalmus_magnuspinnatus
ENSLOCG00000006127	pus1	88	78.674	ENSPEMG00000013448	Pus1	82	78.674	Peromyscus_maniculatus_bairdii
ENSLOCG00000006127	pus1	83	59.021	ENSPMAG00000004636	pus1	99	59.021	Petromyzon_marinus
ENSLOCG00000006127	pus1	73	68.858	ENSPCIG00000022609	-	74	65.495	Phascolarctos_cinereus
ENSLOCG00000006127	pus1	97	68.312	ENSPFOG00000019669	pus1	91	68.312	Poecilia_formosa
ENSLOCG00000006127	pus1	97	68.571	ENSPLAG00000002692	-	91	68.571	Poecilia_latipinna
ENSLOCG00000006127	pus1	97	68.571	ENSPLAG00000007185	pus1	91	68.571	Poecilia_latipinna
ENSLOCG00000006127	pus1	97	68.312	ENSPMEG00000011115	PUS1	91	68.312	Poecilia_mexicana
ENSLOCG00000006127	pus1	97	68.312	ENSPMEG00000006038	pus1	95	68.312	Poecilia_mexicana
ENSLOCG00000006127	pus1	89	72.159	ENSPREG00000007231	pus1	97	72.159	Poecilia_reticulata
ENSLOCG00000006127	pus1	96	73.087	ENSPPYG00000005132	PUS1	88	73.087	Pongo_abelii
ENSLOCG00000006127	pus1	65	71.484	ENSPCAG00000009110	-	62	71.484	Procavia_capensis
ENSLOCG00000006127	pus1	87	69.565	ENSPCOG00000015595	PUS1	88	67.598	Propithecus_coquereli
ENSLOCG00000006127	pus1	96	71.316	ENSPNYG00000013571	pus1	90	71.316	Pundamilia_nyererei
ENSLOCG00000006127	pus1	96	72.632	ENSPNAG00000003938	pus1	88	72.632	Pygocentrus_nattereri
ENSLOCG00000006127	pus1	92	75.000	ENSRNOG00000037500	Pus1	86	75.000	Rattus_norvegicus
ENSLOCG00000006127	pus1	92	75.275	ENSRBIG00000043177	PUS1	90	76.687	Rhinopithecus_bieti
ENSLOCG00000006127	pus1	92	74.725	ENSRROG00000039744	PUS1	88	75.828	Rhinopithecus_roxellana
ENSLOCG00000006127	pus1	81	45.522	YPL212C	-	62	42.581	Saccharomyces_cerevisiae
ENSLOCG00000006127	pus1	92	74.176	ENSSBOG00000023593	PUS1	92	75.232	Saimiri_boliviensis_boliviensis
ENSLOCG00000006127	pus1	98	69.077	ENSSHAG00000013193	PUS1	95	69.077	Sarcophilus_harrisii
ENSLOCG00000006127	pus1	97	77.083	ENSSFOG00015003463	pus1	91	75.879	Scleropages_formosus
ENSLOCG00000006127	pus1	91	70.442	ENSSMAG00000019075	pus1	91	67.448	Scophthalmus_maximus
ENSLOCG00000006127	pus1	96	68.947	ENSSDUG00000007102	pus1	90	68.947	Seriola_dumerili
ENSLOCG00000006127	pus1	96	68.684	ENSSLDG00000022850	pus1	90	68.684	Seriola_lalandi_dorsalis
ENSLOCG00000006127	pus1	76	68.771	ENSSARG00000008367	PUS1	97	68.771	Sorex_araneus
ENSLOCG00000006127	pus1	92	76.294	ENSSPUG00000010009	PUS1	92	76.294	Sphenodon_punctatus
ENSLOCG00000006127	pus1	98	67.268	ENSSPAG00000006272	pus1	98	67.268	Stegastes_partitus
ENSLOCG00000006127	pus1	91	76.177	ENSSSCG00000009741	PUS1	89	76.177	Sus_scrofa
ENSLOCG00000006127	pus1	83	81.040	ENSTGUG00000008068	PUS1	99	81.040	Taeniopygia_guttata
ENSLOCG00000006127	pus1	96	67.979	ENSTRUG00000002198	pus1	92	70.000	Takifugu_rubripes
ENSLOCG00000006127	pus1	98	65.063	ENSTNIG00000003942	pus1	96	67.105	Tetraodon_nigroviridis
ENSLOCG00000006127	pus1	90	75.211	ENSTTRG00000000632	PUS1	84	75.211	Tursiops_truncatus
ENSLOCG00000006127	pus1	88	77.522	ENSUAMG00000017197	PUS1	88	77.522	Ursus_americanus
ENSLOCG00000006127	pus1	88	77.810	ENSUMAG00000002831	PUS1	97	80.124	Ursus_maritimus
ENSLOCG00000006127	pus1	87	76.590	ENSVVUG00000004199	PUS1	78	76.590	Vulpes_vulpes
ENSLOCG00000006127	pus1	90	75.070	ENSXETG00000002030	pus1	88	75.070	Xenopus_tropicalis
ENSLOCG00000006127	pus1	81	48.910	ENSXETG00000033640	-	100	48.910	Xenopus_tropicalis
ENSLOCG00000006127	pus1	100	67.758	ENSXCOG00000004722	pus1	97	69.474	Xiphophorus_couchianus
ENSLOCG00000006127	pus1	97	68.571	ENSXMAG00000000988	pus1	91	68.571	Xiphophorus_maculatus