EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLOCG00000006202 (Gene tree)
Gene ID: 102688882
Gene Symbol: sfswap
Alias: sfrs8|srsf8|zgc:56184
Full Name: splicing factor SWAP
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 73223 bases
Position: chrLG20:8411324-8484546
Accession: 102688882
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000007492	DRY_EERY	PF09750.9	1.4e-32	1	1
ENSLOCP00000007492	Surp	PF01805.20	5.1e-30	1	2
ENSLOCP00000007492	Surp	PF01805.20	5.1e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000007500	-	2892	XM_006640392	ENSLOCP00000007492	963 (aa)	-	W5MGI3

Gene Model

Click here to download ENSLOCG00000006202's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000006202's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000006202	sfswap	76	62.701	ENSACLG00000020159	sfswap	100	55.501	Astatotilapia_calliptera
ENSLOCG00000006202	sfswap	100	57.369	ENSAMXG00000008657	sfswap	100	59.701	Astyanax_mexicanus
ENSLOCG00000006202	sfswap	99	62.138	ENSBTAG00000000439	SFSWAP	99	60.040	Bos_taurus
ENSLOCG00000006202	sfswap	99	60.180	ENSCJAG00000003613	SFSWAP	99	57.952	Callithrix_jacchus
ENSLOCG00000006202	sfswap	99	60.060	ENSCAFG00000006625	SFSWAP	95	69.289	Canis_familiaris
ENSLOCG00000006202	sfswap	99	61.738	ENSCHIG00000008838	SFSWAP	99	59.840	Capra_hircus
ENSLOCG00000006202	sfswap	94	59.368	ENSCAPG00000004394	SFSWAP	56	58.877	Cavia_aperea
ENSLOCG00000006202	sfswap	99	60.278	ENSCPOG00000005280	SFSWAP	54	59.381	Cavia_porcellus
ENSLOCG00000006202	sfswap	99	60.040	ENSCLAG00000008380	SFSWAP	51	58.429	Chinchilla_lanigera
ENSLOCG00000006202	sfswap	76	67.964	ENSCHOG00000003578	SFSWAP	80	67.066	Choloepus_hoffmanni
ENSLOCG00000006202	sfswap	99	55.992	ENSDNOG00000018742	SFSWAP	99	56.841	Dasypus_novemcinctus
ENSLOCG00000006202	sfswap	98	55.769	ENSDORG00000010352	Sfswap	92	59.249	Dipodomys_ordii
ENSLOCG00000006202	sfswap	84	51.020	ENSETEG00000016657	-	78	86.538	Echinops_telfairi
ENSLOCG00000006202	sfswap	85	36.450	ENSEBUG00000016748	SFSWAP	92	43.709	Eptatretus_burgeri
ENSLOCG00000006202	sfswap	99	60.040	ENSEASG00005016502	SFSWAP	93	69.949	Equus_asinus_asinus
ENSLOCG00000006202	sfswap	98	59.592	ENSECAG00000007657	SFSWAP	93	70.202	Equus_caballus
ENSLOCG00000006202	sfswap	71	63.680	ENSEEUG00000001713	SFSWAP	80	60.291	Erinaceus_europaeus
ENSLOCG00000006202	sfswap	100	57.502	ENSELUG00000010942	sfswap	94	60.342	Esox_lucius
ENSLOCG00000006202	sfswap	99	59.159	ENSFCAG00000010778	SFSWAP	95	68.434	Felis_catus
ENSLOCG00000006202	sfswap	98	60.988	ENSFALG00000009577	SFSWAP	89	72.751	Ficedula_albicollis
ENSLOCG00000006202	sfswap	72	64.557	ENSGAFG00000006272	sfswap	100	56.413	Gambusia_affinis
ENSLOCG00000006202	sfswap	76	70.370	ENSGACG00000017647	sfswap	67	70.968	Gasterosteus_aculeatus
ENSLOCG00000006202	sfswap	76	62.400	ENSHBUG00000005629	sfswap	76	61.631	Haplochromis_burtoni
ENSLOCG00000006202	sfswap	99	60.179	ENSHGLG00000019216	SFSWAP	51	55.556	Heterocephalus_glaber_female
ENSLOCG00000006202	sfswap	99	60.199	ENSHGLG00100019350	SFSWAP	51	55.577	Heterocephalus_glaber_male
ENSLOCG00000006202	sfswap	53	73.762	ENSIPUG00000010598	sfswap	63	74.010	Ictalurus_punctatus
ENSLOCG00000006202	sfswap	92	68.329	ENSSTOG00000000773	SFSWAP	92	69.444	Ictidomys_tridecemlineatus
ENSLOCG00000006202	sfswap	99	60.739	ENSJJAG00000006609	Sfswap	99	58.515	Jaculus_jaculus
ENSLOCG00000006202	sfswap	51	58.779	ENSLAFG00000014462	SFSWAP	56	58.144	Loxodonta_africana
ENSLOCG00000006202	sfswap	98	60.550	ENSMFAG00000037352	SFSWAP	99	54.589	Macaca_fascicularis
ENSLOCG00000006202	sfswap	99	61.738	ENSMMUG00000020343	SFSWAP	99	58.659	Macaca_mulatta
ENSLOCG00000006202	sfswap	99	61.738	ENSMNEG00000041002	SFSWAP	99	58.659	Macaca_nemestrina
ENSLOCG00000006202	sfswap	99	59.602	ENSMLEG00000035728	SFSWAP	52	57.965	Mandrillus_leucophaeus
ENSLOCG00000006202	sfswap	76	62.701	ENSMZEG00005017834	SFSWAP	98	55.100	Maylandia_zebra
ENSLOCG00000006202	sfswap	99	60.338	ENSMICG00000004465	SFSWAP	92	69.697	Microcebus_murinus
ENSLOCG00000006202	sfswap	99	59.519	ENSMPUG00000002218	SFSWAP	54	55.576	Mustela_putorius_furo
ENSLOCG00000006202	sfswap	89	52.743	ENSMLUG00000011296	SFSWAP	78	60.165	Myotis_lucifugus
ENSLOCG00000006202	sfswap	70	59.971	ENSNBRG00000020857	sfswap	99	54.119	Neolamprologus_brichardi
ENSLOCG00000006202	sfswap	99	58.126	ENSNLEG00000008386	SFSWAP	95	70.202	Nomascus_leucogenys
ENSLOCG00000006202	sfswap	66	86.792	ENSMEUG00000009556	-	71	86.792	Notamacropus_eugenii
ENSLOCG00000006202	sfswap	71	68.254	ENSOPRG00000006983	-	64	69.169	Ochotona_princeps
ENSLOCG00000006202	sfswap	99	60.059	ENSODEG00000008020	SFSWAP	92	69.598	Octodon_degus
ENSLOCG00000006202	sfswap	85	62.821	ENSONIG00000003757	sfswap	50	70.541	Oreochromis_niloticus
ENSLOCG00000006202	sfswap	51	56.711	ENSOCUG00000002165	SFSWAP	99	59.406	Oryctolagus_cuniculus
ENSLOCG00000006202	sfswap	99	61.416	ENSOARG00000014314	SFSWAP	99	58.483	Ovis_aries
ENSLOCG00000006202	sfswap	99	57.307	ENSPPRG00000017318	SFSWAP	99	54.239	Panthera_pardus
ENSLOCG00000006202	sfswap	98	54.032	ENSPTIG00000004304	SFSWAP	95	67.669	Panthera_tigris_altaica
ENSLOCG00000006202	sfswap	72	63.800	ENSPKIG00000008327	sfswap	100	57.731	Paramormyrops_kingsleyae
ENSLOCG00000006202	sfswap	50	54.564	ENSPMAG00000008279	sfswap	77	61.389	Petromyzon_marinus
ENSLOCG00000006202	sfswap	85	72.566	ENSPCIG00000006062	SFSWAP	90	68.785	Phascolarctos_cinereus
ENSLOCG00000006202	sfswap	72	64.215	ENSPFOG00000019657	sfswap	100	57.042	Poecilia_formosa
ENSLOCG00000006202	sfswap	72	64.498	ENSPLAG00000008513	sfswap	100	57.345	Poecilia_latipinna
ENSLOCG00000006202	sfswap	72	64.215	ENSPMEG00000008716	sfswap	100	57.274	Poecilia_mexicana
ENSLOCG00000006202	sfswap	72	63.649	ENSPREG00000006692	sfswap	100	56.579	Poecilia_reticulata
ENSLOCG00000006202	sfswap	99	60.079	ENSPCOG00000023786	SFSWAP	92	69.192	Propithecus_coquereli
ENSLOCG00000006202	sfswap	75	68.434	ENSPVAG00000014918	SFSWAP	84	63.109	Pteropus_vampyrus
ENSLOCG00000006202	sfswap	76	62.567	ENSPNYG00000012660	sfswap	71	61.497	Pundamilia_nyererei
ENSLOCG00000006202	sfswap	99	59.487	ENSRBIG00000036330	SFSWAP	95	70.202	Rhinopithecus_bieti
ENSLOCG00000006202	sfswap	99	59.502	ENSRROG00000032001	SFSWAP	52	57.935	Rhinopithecus_roxellana
ENSLOCG00000006202	sfswap	99	57.674	ENSSBOG00000026217	SFSWAP	99	55.396	Saimiri_boliviensis_boliviensis
ENSLOCG00000006202	sfswap	69	65.896	ENSSFOG00015000766	sfswap	100	59.018	Scleropages_formosus
ENSLOCG00000006202	sfswap	77	71.154	ENSSARG00000000424	SFSWAP	78	71.154	Sorex_araneus
ENSLOCG00000006202	sfswap	99	59.660	ENSSSCG00000009744	SFSWAP	52	61.259	Sus_scrofa
ENSLOCG00000006202	sfswap	90	68.395	ENSTTRG00000013478	SFSWAP	90	69.697	Tursiops_truncatus
ENSLOCG00000006202	sfswap	99	55.195	ENSUAMG00000016807	SFSWAP	99	58.918	Ursus_americanus
ENSLOCG00000006202	sfswap	90	54.535	ENSUMAG00000002957	SFSWAP	75	64.838	Ursus_maritimus
ENSLOCG00000006202	sfswap	99	60.060	ENSVVUG00000010753	SFSWAP	95	69.289	Vulpes_vulpes
ENSLOCG00000006202	sfswap	100	58.130	ENSXMAG00000009020	sfswap	100	57.419	Xiphophorus_maculatus