EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLOCG00000006265 (Gene tree)
Gene ID: 102689285
Gene Symbol: rabl3
Alias: fb40b02|wu:fb40b02|zgc:100876
Full Name: RAB%2C member of RAS oncogene family like 3
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 9312 bases
Position: chrLG17:16133831-16143142
Accession: 102689285
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000007569	MMR_HSR1	PF01926.23	2.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000007577	-	4925	XM_006639031	ENSLOCP00000007569	236 (aa)	XP_006639094	W5MGR0

Gene Model

Click here to download ENSLOCG00000006265's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000006265's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000006265	rabl3	100	87.712	ENSG00000144840	RABL3	100	89.922	Homo_sapiens
ENSLOCG00000006265	rabl3	100	88.608	ENSAPOG00000024479	rabl3	100	88.608	Acanthochromis_polyacanthus
ENSLOCG00000006265	rabl3	100	88.136	ENSAMEG00000004809	RABL3	100	88.136	Ailuropoda_melanoleuca
ENSLOCG00000006265	rabl3	100	84.746	ENSACIG00000014343	rabl3	100	84.746	Amphilophus_citrinellus
ENSLOCG00000006265	rabl3	100	88.608	ENSAOCG00000011851	rabl3	100	88.608	Amphiprion_ocellaris
ENSLOCG00000006265	rabl3	100	88.608	ENSAPEG00000011214	rabl3	100	88.608	Amphiprion_percula
ENSLOCG00000006265	rabl3	100	89.407	ENSATEG00000003503	rabl3	100	89.407	Anabas_testudineus
ENSLOCG00000006265	rabl3	99	85.043	ENSACAG00000011313	-	99	85.043	Anolis_carolinensis
ENSLOCG00000006265	rabl3	100	89.831	ENSANAG00000027278	RABL3	100	89.831	Aotus_nancymaae
ENSLOCG00000006265	rabl3	100	88.136	ENSACLG00000009820	rabl3	100	88.136	Astatotilapia_calliptera
ENSLOCG00000006265	rabl3	100	87.288	ENSAMXG00000038716	rabl3	100	87.288	Astyanax_mexicanus
ENSLOCG00000006265	rabl3	100	89.831	ENSBTAG00000015898	RABL3	100	89.831	Bos_taurus
ENSLOCG00000006265	rabl3	100	89.831	ENSCJAG00000008611	RABL3	100	89.831	Callithrix_jacchus
ENSLOCG00000006265	rabl3	100	88.983	ENSCAFG00000011292	RABL3	89	88.983	Canis_familiaris
ENSLOCG00000006265	rabl3	100	88.983	ENSCAFG00020006397	RABL3	100	88.983	Canis_lupus_dingo
ENSLOCG00000006265	rabl3	100	89.831	ENSCHIG00000017365	RABL3	100	89.831	Capra_hircus
ENSLOCG00000006265	rabl3	100	87.712	ENSCPOG00000009645	RABL3	100	87.712	Cavia_porcellus
ENSLOCG00000006265	rabl3	100	88.136	ENSCATG00000032561	RABL3	100	88.136	Cercocebus_atys
ENSLOCG00000006265	rabl3	100	87.288	ENSCLAG00000010855	RABL3	100	87.288	Chinchilla_lanigera
ENSLOCG00000006265	rabl3	99	87.554	ENSCSAG00000007155	RABL3	100	87.554	Chlorocebus_sabaeus
ENSLOCG00000006265	rabl3	100	88.983	ENSCPBG00000001999	RABL3	100	88.983	Chrysemys_picta_bellii
ENSLOCG00000006265	rabl3	100	88.136	ENSCANG00000031684	RABL3	100	88.136	Colobus_angolensis_palliatus
ENSLOCG00000006265	rabl3	100	86.864	ENSCGRG00001021537	Rabl3	100	86.864	Cricetulus_griseus_chok1gshd
ENSLOCG00000006265	rabl3	100	86.864	ENSCGRG00000002114	Rabl3	100	86.864	Cricetulus_griseus_crigri
ENSLOCG00000006265	rabl3	100	76.695	ENSCSEG00000014982	rabl3	100	76.695	Cynoglossus_semilaevis
ENSLOCG00000006265	rabl3	100	73.305	ENSCVAG00000009904	rabl3	100	73.305	Cyprinodon_variegatus
ENSLOCG00000006265	rabl3	100	87.288	ENSDARG00000040959	rabl3	100	87.288	Danio_rerio
ENSLOCG00000006265	rabl3	100	86.864	ENSDNOG00000008174	RABL3	100	86.864	Dasypus_novemcinctus
ENSLOCG00000006265	rabl3	100	88.136	ENSETEG00000010206	RABL3	100	88.136	Echinops_telfairi
ENSLOCG00000006265	rabl3	100	89.407	ENSECAG00000023059	RABL3	100	89.407	Equus_caballus
ENSLOCG00000006265	rabl3	100	82.203	ENSEEUG00000002897	RABL3	100	82.203	Erinaceus_europaeus
ENSLOCG00000006265	rabl3	100	86.441	ENSELUG00000014758	rabl3	100	86.441	Esox_lucius
ENSLOCG00000006265	rabl3	100	89.407	ENSFCAG00000031879	RABL3	100	79.237	Felis_catus
ENSLOCG00000006265	rabl3	100	88.136	ENSFALG00000005296	RABL3	100	88.136	Ficedula_albicollis
ENSLOCG00000006265	rabl3	100	87.288	ENSFDAG00000000307	RABL3	100	87.288	Fukomys_damarensis
ENSLOCG00000006265	rabl3	100	86.441	ENSFHEG00000011273	rabl3	100	86.441	Fundulus_heteroclitus
ENSLOCG00000006265	rabl3	100	86.017	ENSGMOG00000007845	rabl3	100	86.017	Gadus_morhua
ENSLOCG00000006265	rabl3	100	88.983	ENSGALG00000014949	RABL3	100	88.983	Gallus_gallus
ENSLOCG00000006265	rabl3	100	85.593	ENSGAFG00000015953	rabl3	100	85.593	Gambusia_affinis
ENSLOCG00000006265	rabl3	100	86.017	ENSGACG00000007387	rabl3	100	89.147	Gasterosteus_aculeatus
ENSLOCG00000006265	rabl3	100	88.983	ENSGAGG00000003677	RABL3	100	88.983	Gopherus_agassizii
ENSLOCG00000006265	rabl3	100	87.712	ENSGGOG00000006059	RABL3	100	87.712	Gorilla_gorilla
ENSLOCG00000006265	rabl3	100	88.559	ENSHBUG00000019478	rabl3	93	88.559	Haplochromis_burtoni
ENSLOCG00000006265	rabl3	100	87.288	ENSHGLG00000014491	RABL3	100	87.288	Heterocephalus_glaber_female
ENSLOCG00000006265	rabl3	100	87.288	ENSHGLG00100004866	RABL3	100	87.288	Heterocephalus_glaber_male
ENSLOCG00000006265	rabl3	100	74.576	ENSHCOG00000019245	rabl3	100	74.576	Hippocampus_comes
ENSLOCG00000006265	rabl3	100	87.288	ENSIPUG00000012657	rabl3	100	87.288	Ictalurus_punctatus
ENSLOCG00000006265	rabl3	100	87.288	ENSSTOG00000019452	RABL3	100	87.288	Ictidomys_tridecemlineatus
ENSLOCG00000006265	rabl3	100	77.542	ENSJJAG00000023553	Rabl3	100	77.542	Jaculus_jaculus
ENSLOCG00000006265	rabl3	100	82.627	ENSKMAG00000015464	rabl3	100	82.627	Kryptolebias_marmoratus
ENSLOCG00000006265	rabl3	100	88.186	ENSLBEG00000010627	-	100	88.186	Labrus_bergylta
ENSLOCG00000006265	rabl3	100	88.186	ENSLBEG00000020595	rabl3	100	88.186	Labrus_bergylta
ENSLOCG00000006265	rabl3	100	88.136	ENSLAFG00000003711	RABL3	100	88.136	Loxodonta_africana
ENSLOCG00000006265	rabl3	100	88.136	ENSMFAG00000031923	RABL3	100	88.136	Macaca_fascicularis
ENSLOCG00000006265	rabl3	100	77.966	ENSMMUG00000001594	RABL3	100	77.966	Macaca_mulatta
ENSLOCG00000006265	rabl3	100	88.136	ENSMNEG00000043980	RABL3	100	88.136	Macaca_nemestrina
ENSLOCG00000006265	rabl3	100	88.136	ENSMLEG00000028177	RABL3	100	88.136	Mandrillus_leucophaeus
ENSLOCG00000006265	rabl3	100	88.136	ENSMAMG00000015155	rabl3	100	88.136	Mastacembelus_armatus
ENSLOCG00000006265	rabl3	100	88.136	ENSMZEG00005002607	rabl3	100	88.136	Maylandia_zebra
ENSLOCG00000006265	rabl3	100	86.864	ENSMAUG00000013022	Rabl3	100	86.864	Mesocricetus_auratus
ENSLOCG00000006265	rabl3	100	88.559	ENSMICG00000049288	RABL3	100	88.559	Microcebus_murinus
ENSLOCG00000006265	rabl3	100	86.864	ENSMOCG00000015237	Rabl3	100	86.864	Microtus_ochrogaster
ENSLOCG00000006265	rabl3	100	83.898	ENSMMOG00000005628	rabl3	100	83.898	Mola_mola
ENSLOCG00000006265	rabl3	100	89.407	ENSMODG00000018232	RABL3	100	89.407	Monodelphis_domestica
ENSLOCG00000006265	rabl3	100	82.845	ENSMALG00000018837	rabl3	100	82.845	Monopterus_albus
ENSLOCG00000006265	rabl3	100	87.712	MGP_CAROLIEiJ_G0020728	Rabl3	100	90.698	Mus_caroli
ENSLOCG00000006265	rabl3	100	87.712	ENSMUSG00000022827	Rabl3	100	90.698	Mus_musculus
ENSLOCG00000006265	rabl3	100	87.712	MGP_PahariEiJ_G0016429	Rabl3	100	90.698	Mus_pahari
ENSLOCG00000006265	rabl3	100	87.712	MGP_SPRETEiJ_G0021628	Rabl3	100	90.698	Mus_spretus
ENSLOCG00000006265	rabl3	100	88.983	ENSMPUG00000008257	RABL3	89	88.983	Mustela_putorius_furo
ENSLOCG00000006265	rabl3	100	87.288	ENSMLUG00000014113	RABL3	100	87.288	Myotis_lucifugus
ENSLOCG00000006265	rabl3	98	77.586	ENSNGAG00000001939	Rabl3	100	77.586	Nannospalax_galili
ENSLOCG00000006265	rabl3	93	90.909	ENSNBRG00000012423	rabl3	94	90.909	Neolamprologus_brichardi
ENSLOCG00000006265	rabl3	100	88.136	ENSNLEG00000031723	RABL3	100	88.136	Nomascus_leucogenys
ENSLOCG00000006265	rabl3	100	87.288	ENSMEUG00000006606	RABL3	100	87.288	Notamacropus_eugenii
ENSLOCG00000006265	rabl3	100	86.864	ENSODEG00000004758	-	100	86.864	Octodon_degus
ENSLOCG00000006265	rabl3	100	88.983	ENSONIG00000004281	rabl3	100	88.983	Oreochromis_niloticus
ENSLOCG00000006265	rabl3	99	86.325	ENSOANG00000003928	RABL3	99	86.325	Ornithorhynchus_anatinus
ENSLOCG00000006265	rabl3	100	86.441	ENSORLG00000020457	rabl3	100	86.441	Oryzias_latipes
ENSLOCG00000006265	rabl3	100	86.441	ENSORLG00020008991	rabl3	100	82.627	Oryzias_latipes_hni
ENSLOCG00000006265	rabl3	100	86.441	ENSORLG00015005649	rabl3	88	86.441	Oryzias_latipes_hsok
ENSLOCG00000006265	rabl3	100	87.712	ENSOMEG00000015066	rabl3	100	87.712	Oryzias_melastigma
ENSLOCG00000006265	rabl3	100	88.559	ENSOGAG00000005961	RABL3	100	88.559	Otolemur_garnettii
ENSLOCG00000006265	rabl3	100	89.831	ENSOARG00000019939	RABL3	100	89.831	Ovis_aries
ENSLOCG00000006265	rabl3	94	86.486	ENSPPAG00000036997	RABL3	87	86.486	Pan_paniscus
ENSLOCG00000006265	rabl3	100	88.983	ENSPPRG00000016325	RABL3	100	88.983	Panthera_pardus
ENSLOCG00000006265	rabl3	100	88.983	ENSPTIG00000018021	RABL3	100	88.983	Panthera_tigris_altaica
ENSLOCG00000006265	rabl3	100	87.712	ENSPTRG00000015272	RABL3	100	87.712	Pan_troglodytes
ENSLOCG00000006265	rabl3	100	88.136	ENSPANG00000001339	RABL3	100	88.136	Papio_anubis
ENSLOCG00000006265	rabl3	100	88.983	ENSPKIG00000007818	rabl3	100	88.983	Paramormyrops_kingsleyae
ENSLOCG00000006265	rabl3	100	88.983	ENSPSIG00000011358	RABL3	100	88.983	Pelodiscus_sinensis
ENSLOCG00000006265	rabl3	100	83.898	ENSPMGG00000015794	rabl3	100	83.898	Periophthalmus_magnuspinnatus
ENSLOCG00000006265	rabl3	100	87.712	ENSPEMG00000016913	Rabl3	100	87.712	Peromyscus_maniculatus_bairdii
ENSLOCG00000006265	rabl3	100	88.136	ENSPCIG00000018922	RABL3	100	88.136	Phascolarctos_cinereus
ENSLOCG00000006265	rabl3	100	86.017	ENSPFOG00000008586	rabl3	100	86.017	Poecilia_formosa
ENSLOCG00000006265	rabl3	100	86.017	ENSPLAG00000014482	rabl3	100	86.017	Poecilia_latipinna
ENSLOCG00000006265	rabl3	100	86.017	ENSPMEG00000002295	rabl3	100	86.017	Poecilia_mexicana
ENSLOCG00000006265	rabl3	100	86.017	ENSPREG00000014815	rabl3	100	86.017	Poecilia_reticulata
ENSLOCG00000006265	rabl3	100	88.136	ENSPPYG00000013501	RABL3	100	88.136	Pongo_abelii
ENSLOCG00000006265	rabl3	100	88.983	ENSPCOG00000022230	RABL3	100	88.983	Propithecus_coquereli
ENSLOCG00000006265	rabl3	100	86.864	ENSPVAG00000010013	RABL3	100	86.864	Pteropus_vampyrus
ENSLOCG00000006265	rabl3	100	88.559	ENSPNYG00000006659	rabl3	100	88.559	Pundamilia_nyererei
ENSLOCG00000006265	rabl3	100	88.983	ENSPNAG00000000748	rabl3	100	88.983	Pygocentrus_nattereri
ENSLOCG00000006265	rabl3	100	87.288	ENSRNOG00000026085	Rabl3	100	87.288	Rattus_norvegicus
ENSLOCG00000006265	rabl3	100	88.136	ENSRBIG00000040941	RABL3	100	88.136	Rhinopithecus_bieti
ENSLOCG00000006265	rabl3	100	88.136	ENSRROG00000043745	RABL3	100	88.136	Rhinopithecus_roxellana
ENSLOCG00000006265	rabl3	100	89.831	ENSSBOG00000004022	RABL3	100	89.831	Saimiri_boliviensis_boliviensis
ENSLOCG00000006265	rabl3	100	88.136	ENSSHAG00000012233	RABL3	100	88.136	Sarcophilus_harrisii
ENSLOCG00000006265	rabl3	100	90.254	ENSSFOG00015010171	rabl3	100	90.254	Scleropages_formosus
ENSLOCG00000006265	rabl3	100	87.764	ENSSMAG00000002403	rabl3	100	87.764	Scophthalmus_maximus
ENSLOCG00000006265	rabl3	100	89.407	ENSSDUG00000012078	rabl3	100	89.407	Seriola_dumerili
ENSLOCG00000006265	rabl3	100	89.831	ENSSLDG00000021899	rabl3	100	89.831	Seriola_lalandi_dorsalis
ENSLOCG00000006265	rabl3	100	88.983	ENSSARG00000008316	RABL3	100	88.983	Sorex_araneus
ENSLOCG00000006265	rabl3	100	88.983	ENSSPUG00000017490	RABL3	100	88.983	Sphenodon_punctatus
ENSLOCG00000006265	rabl3	100	88.983	ENSSPAG00000011642	rabl3	100	88.983	Stegastes_partitus
ENSLOCG00000006265	rabl3	100	89.407	ENSSSCG00000035258	RABL3	100	89.407	Sus_scrofa
ENSLOCG00000006265	rabl3	100	88.559	ENSTGUG00000013374	RABL3	100	88.559	Taeniopygia_guttata
ENSLOCG00000006265	rabl3	81	85.052	ENSTRUG00000007846	RABL3	100	91.406	Takifugu_rubripes
ENSLOCG00000006265	rabl3	100	75.000	ENSTBEG00000005153	RABL3	100	75.000	Tupaia_belangeri
ENSLOCG00000006265	rabl3	100	88.136	ENSUAMG00000005299	RABL3	100	88.136	Ursus_americanus
ENSLOCG00000006265	rabl3	100	87.712	ENSUMAG00000025256	RABL3	89	87.712	Ursus_maritimus
ENSLOCG00000006265	rabl3	100	89.407	ENSVPAG00000003776	RABL3	100	89.407	Vicugna_pacos
ENSLOCG00000006265	rabl3	100	88.983	ENSVVUG00000022300	RABL3	89	88.983	Vulpes_vulpes
ENSLOCG00000006265	rabl3	100	86.017	ENSXMAG00000003244	rabl3	100	86.017	Xiphophorus_maculatus