EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSLOCG00000006278 (Gene tree)
Gene ID
102685071
Gene Symbol
hdlbpa
Alias
HBP|cb591|cb811|hdlbp|wu:fb36d01|wu:fb94h08|wu:fc23d06|wu:fc75h07
Full Name
high density lipoprotein binding protein
Gene Type
protein_coding
Species
Lepisosteus_oculatus
Status
putative
Strand
Minus strand
Length
17070 bases
Position
chrLG14:11917931-11935000
Accession
102685071
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSLOCP00000007593KH_1PF00013.291.5e-186114
ENSLOCP00000007593KH_1PF00013.291.5e-186214
ENSLOCP00000007593KH_1PF00013.291.5e-186314
ENSLOCP00000007593KH_1PF00013.291.5e-186414
ENSLOCP00000007593KH_1PF00013.291.5e-186514
ENSLOCP00000007593KH_1PF00013.291.5e-186614
ENSLOCP00000007593KH_1PF00013.291.5e-186714
ENSLOCP00000007593KH_1PF00013.291.5e-186814
ENSLOCP00000007593KH_1PF00013.291.5e-186914
ENSLOCP00000007593KH_1PF00013.291.5e-1861014
ENSLOCP00000007593KH_1PF00013.291.5e-1861114
ENSLOCP00000007593KH_1PF00013.291.5e-1861214
ENSLOCP00000007593KH_1PF00013.291.5e-1861314
ENSLOCP00000007593KH_1PF00013.291.5e-1861414
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSLOCT00000007602-5984XM_006637667ENSLOCP000000075931271 (aa)XP_015216731W5MGT4
Gene Model
Click here to download ENSLOCG00000006278's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000006278's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSLOCG00000006278hdlbpa10072.877ENSLOCG00000013909hdlbpb10072.877
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSLOCG00000006278hdlbpa9980.627ENSG00000115677HDLBP9786.486Homo_sapiens
ENSLOCG00000006278hdlbpa10088.157ENSAPOG00000012609hdlbpa10088.314Acanthochromis_polyacanthus
ENSLOCG00000006278hdlbpa9980.863ENSAMEG00000016552HDLBP10080.863Ailuropoda_melanoleuca
ENSLOCG00000006278hdlbpa10084.838ENSACIG00000006015hdlbpa10086.355Amphilophus_citrinellus
ENSLOCG00000006278hdlbpa10087.922ENSAOCG00000000300hdlbpa10088.078Amphiprion_ocellaris
ENSLOCG00000006278hdlbpa10087.843ENSAPEG00000000522hdlbpa10088.000Amphiprion_percula
ENSLOCG00000006278hdlbpa10087.686ENSATEG00000009748hdlbpa10087.686Anabas_testudineus
ENSLOCG00000006278hdlbpa9981.319ENSACAG00000001556HDLBP10081.319Anolis_carolinensis
ENSLOCG00000006278hdlbpa9980.784ENSANAG00000020545HDLBP10080.784Aotus_nancymaae
ENSLOCG00000006278hdlbpa10087.922ENSACLG00000025965hdlbpa10088.078Astatotilapia_calliptera
ENSLOCG00000006278hdlbpa9390.609ENSAMXG00000004221hdlbpa10090.609Astyanax_mexicanus
ENSLOCG00000006278hdlbpa9979.765ENSBTAG00000004315HDLBP10079.765Bos_taurus
ENSLOCG00000006278hdlbpa9980.423ENSCJAG00000006152HDLBP10080.423Callithrix_jacchus
ENSLOCG00000006278hdlbpa9980.784ENSCAFG00000012913HDLBP10081.964Canis_familiaris
ENSLOCG00000006278hdlbpa9980.784ENSCAFG00020025089HDLBP10080.784Canis_lupus_dingo
ENSLOCG00000006278hdlbpa9979.843ENSCHIG00000022364HDLBP10079.843Capra_hircus
ENSLOCG00000006278hdlbpa9980.314ENSTSYG00000002379HDLBP10080.314Carlito_syrichta
ENSLOCG00000006278hdlbpa9977.909ENSCAPG00000008584HDLBP10077.909Cavia_aperea
ENSLOCG00000006278hdlbpa9980.676ENSCPOG00000006297HDLBP10080.676Cavia_porcellus
ENSLOCG00000006278hdlbpa9258.610ENSCCAG00000037920-10058.610Cebus_capucinus
ENSLOCG00000006278hdlbpa9980.706ENSCCAG00000023361-10080.706Cebus_capucinus
ENSLOCG00000006278hdlbpa9980.745ENSCATG00000039363HDLBP10080.627Cercocebus_atys
ENSLOCG00000006278hdlbpa9980.676ENSCLAG00000002365HDLBP10080.676Chinchilla_lanigera
ENSLOCG00000006278hdlbpa9979.845ENSCSAG00000005781HDLBP10079.845Chlorocebus_sabaeus
ENSLOCG00000006278hdlbpa9259.700ENSCHOG00000003882-9959.700Choloepus_hoffmanni
ENSLOCG00000006278hdlbpa9980.534ENSCPBG00000002442HDLBP10081.165Chrysemys_picta_bellii
ENSLOCG00000006278hdlbpa9980.706ENSCANG00000033571HDLBP10080.706Colobus_angolensis_palliatus
ENSLOCG00000006278hdlbpa9980.706ENSCGRG00001006086Hdlbp10080.706Cricetulus_griseus_chok1gshd
ENSLOCG00000006278hdlbpa9042.947ENSCGRG000010105704921511C20Rik10042.947Cricetulus_griseus_chok1gshd
ENSLOCG00000006278hdlbpa9980.706ENSCGRG00000014444Hdlbp10080.706Cricetulus_griseus_crigri
ENSLOCG00000006278hdlbpa9843.735ENSCGRG00000015720Gm3829943.735Cricetulus_griseus_crigri
ENSLOCG00000006278hdlbpa10087.216ENSCSEG00000008853hdlbpa10087.216Cynoglossus_semilaevis
ENSLOCG00000006278hdlbpa10086.656ENSCVAG00000017892hdlbpa10086.656Cyprinodon_variegatus
ENSLOCG00000006278hdlbpa10087.862ENSDARG00000009830hdlbpa10088.097Danio_rerio
ENSLOCG00000006278hdlbpa9978.750ENSDNOG00000006753HDLBP10078.795Dasypus_novemcinctus
ENSLOCG00000006278hdlbpa9774.800ENSETEG00000005416-7974.800Echinops_telfairi
ENSLOCG00000006278hdlbpa9980.627ENSEASG00005008249HDLBP10080.627Equus_asinus_asinus
ENSLOCG00000006278hdlbpa9952.862ENSECAG00000030885-9953.074Equus_caballus
ENSLOCG00000006278hdlbpa9980.627ENSECAG00000012829HDLBP10080.627Equus_caballus
ENSLOCG00000006278hdlbpa9948.390ENSECAG00000028723-9948.390Equus_caballus
ENSLOCG00000006278hdlbpa9071.632ENSEEUG00000014648HDLBP10071.632Erinaceus_europaeus
ENSLOCG00000006278hdlbpa10085.813ENSELUG00000010700hdlbpa10085.813Esox_lucius
ENSLOCG00000006278hdlbpa9980.549ENSFCAG00000010455HDLBP10080.549Felis_catus
ENSLOCG00000006278hdlbpa9983.124ENSFALG00000003437HDLBP10083.124Ficedula_albicollis
ENSLOCG00000006278hdlbpa9980.361ENSFDAG00000000456HDLBP10080.361Fukomys_damarensis
ENSLOCG00000006278hdlbpa10085.961ENSFHEG00000004848hdlbpa10086.275Fundulus_heteroclitus
ENSLOCG00000006278hdlbpa10084.297ENSGMOG00000009932hdlbpa10084.375Gadus_morhua
ENSLOCG00000006278hdlbpa9982.889ENSGALG00000005823HDLBP10083.124Gallus_gallus
ENSLOCG00000006278hdlbpa10058.401ENSGAFG00000016766hdlbpa10058.401Gambusia_affinis
ENSLOCG00000006278hdlbpa10084.953ENSGACG00000004648hdlbpa10085.031Gasterosteus_aculeatus
ENSLOCG00000006278hdlbpa9982.810ENSGAGG00000004256HDLBP10082.810Gopherus_agassizii
ENSLOCG00000006278hdlbpa9980.627ENSGGOG00000004392HDLBP10080.627Gorilla_gorilla
ENSLOCG00000006278hdlbpa10088.078ENSHBUG00000001136hdlbpa10088.235Haplochromis_burtoni
ENSLOCG00000006278hdlbpa9980.047ENSHGLG00000004910HDLBP10080.047Heterocephalus_glaber_female
ENSLOCG00000006278hdlbpa9980.047ENSHGLG00100013326HDLBP10080.047Heterocephalus_glaber_male
ENSLOCG00000006278hdlbpa10085.125ENSHCOG00000014837hdlbpa10085.391Hippocampus_comes
ENSLOCG00000006278hdlbpa10088.638ENSIPUG00000013088hdlbp10088.638Ictalurus_punctatus
ENSLOCG00000006278hdlbpa8478.195ENSIPUG00000013177-9178.195Ictalurus_punctatus
ENSLOCG00000006278hdlbpa9980.361ENSSTOG00000013331HDLBP10080.676Ictidomys_tridecemlineatus
ENSLOCG00000006278hdlbpa9981.176ENSJJAG00000003596Hdlbp10081.176Jaculus_jaculus
ENSLOCG00000006278hdlbpa8940.157ENSJJAG00000013712-9240.157Jaculus_jaculus
ENSLOCG00000006278hdlbpa10086.342ENSKMAG00000007571hdlbpa10086.499Kryptolebias_marmoratus
ENSLOCG00000006278hdlbpa10087.119ENSLBEG00000027461hdlbpa10087.119Labrus_bergylta
ENSLOCG00000006278hdlbpa10083.739ENSLACG00000003592HDLBP10083.739Latimeria_chalumnae
ENSLOCG00000006278hdlbpa9980.235ENSLAFG00000014826HDLBP10080.235Loxodonta_africana
ENSLOCG00000006278hdlbpa9980.627ENSMFAG00000033641HDLBP10080.627Macaca_fascicularis
ENSLOCG00000006278hdlbpa9980.549ENSMMUG00000004730HDLBP10080.549Macaca_mulatta
ENSLOCG00000006278hdlbpa9980.627ENSMNEG00000024260HDLBP10080.627Macaca_nemestrina
ENSLOCG00000006278hdlbpa9980.627ENSMLEG00000042734HDLBP10080.627Mandrillus_leucophaeus
ENSLOCG00000006278hdlbpa10087.843ENSMAMG00000008611hdlbpa10088.000Mastacembelus_armatus
ENSLOCG00000006278hdlbpa10087.922ENSMZEG00005009513hdlbpa10088.078Maylandia_zebra
ENSLOCG00000006278hdlbpa9980.534ENSMGAG00000003686HDLBP10084.229Meleagris_gallopavo
ENSLOCG00000006278hdlbpa9980.863ENSMAUG00000017743Hdlbp10080.863Mesocricetus_auratus
ENSLOCG00000006278hdlbpa9980.706ENSMICG00000004569HDLBP10080.706Microcebus_murinus
ENSLOCG00000006278hdlbpa9980.706ENSMOCG00000006679Hdlbp10080.706Microtus_ochrogaster
ENSLOCG00000006278hdlbpa9782.742ENSMMOG00000006880hdlbpa9982.742Mola_mola
ENSLOCG00000006278hdlbpa9981.012ENSMODG00000016033HDLBP10081.012Monodelphis_domestica
ENSLOCG00000006278hdlbpa10087.765ENSMALG00000015095hdlbpa10087.843Monopterus_albus
ENSLOCG00000006278hdlbpa9041.929MGP_CAROLIEiJ_G00333744921511C20Rik10041.929Mus_caroli
ENSLOCG00000006278hdlbpa9343.661MGP_CAROLIEiJ_G0033373Gm3829443.661Mus_caroli
ENSLOCG00000006278hdlbpa9980.627MGP_CAROLIEiJ_G0014456Hdlbp10080.627Mus_caroli
ENSLOCG00000006278hdlbpa9042.138ENSMUSG000000498154921511C20Rik10042.138Mus_musculus
ENSLOCG00000006278hdlbpa9542.963ENSMUSG00000062791Gm3829642.963Mus_musculus
ENSLOCG00000006278hdlbpa9980.627ENSMUSG00000034088Hdlbp10080.627Mus_musculus
ENSLOCG00000006278hdlbpa9443.336MGP_PahariEiJ_G0031913Gm3829443.336Mus_pahari
ENSLOCG00000006278hdlbpa8841.263MGP_PahariEiJ_G00319144921511C20Rik10041.263Mus_pahari
ENSLOCG00000006278hdlbpa9980.549MGP_PahariEiJ_G0027692Hdlbp10080.549Mus_pahari
ENSLOCG00000006278hdlbpa9980.627MGP_SPRETEiJ_G0015260Hdlbp10080.627Mus_spretus
ENSLOCG00000006278hdlbpa9041.929MGP_SPRETEiJ_G00345394921511C20Rik10041.929Mus_spretus
ENSLOCG00000006278hdlbpa9542.798MGP_SPRETEiJ_G0034538Gm3829642.798Mus_spretus
ENSLOCG00000006278hdlbpa9980.627ENSMPUG00000000163HDLBP10080.627Mustela_putorius_furo
ENSLOCG00000006278hdlbpa9980.597ENSMLUG00000005628HDLBP10080.597Myotis_lucifugus
ENSLOCG00000006278hdlbpa9980.784ENSNGAG00000014873Hdlbp10080.784Nannospalax_galili
ENSLOCG00000006278hdlbpa9888.268ENSNBRG00000000051hdlbpa9988.428Neolamprologus_brichardi
ENSLOCG00000006278hdlbpa9573.712ENSNLEG00000031018-9974.476Nomascus_leucogenys
ENSLOCG00000006278hdlbpa9980.627ENSNLEG00000013818HDLBP10080.627Nomascus_leucogenys
ENSLOCG00000006278hdlbpa9989.420ENSMEUG00000008427HDLBP8889.420Notamacropus_eugenii
ENSLOCG00000006278hdlbpa9481.072ENSOPRG00000011965-9481.072Ochotona_princeps
ENSLOCG00000006278hdlbpa9976.355ENSODEG00000017391-10076.355Octodon_degus
ENSLOCG00000006278hdlbpa9980.440ENSODEG00000012313-10080.440Octodon_degus
ENSLOCG00000006278hdlbpa10087.922ENSONIG00000019272hdlbpa10088.078Oreochromis_niloticus
ENSLOCG00000006278hdlbpa9982.132ENSOANG00000011759-10082.132Ornithorhynchus_anatinus
ENSLOCG00000006278hdlbpa6185.106ENSOANG00000021864-9985.106Ornithorhynchus_anatinus
ENSLOCG00000006278hdlbpa9980.627ENSOCUG00000012667HDLBP10080.627Oryctolagus_cuniculus
ENSLOCG00000006278hdlbpa10086.973ENSORLG00000002226hdlbpa10087.051Oryzias_latipes
ENSLOCG00000006278hdlbpa10086.895ENSORLG00020007905hdlbpa10086.973Oryzias_latipes_hni
ENSLOCG00000006278hdlbpa10086.817ENSORLG00015004126hdlbpa10086.895Oryzias_latipes_hsok
ENSLOCG00000006278hdlbpa10084.664ENSOMEG00000000247hdlbpa10084.742Oryzias_melastigma
ENSLOCG00000006278hdlbpa9980.314ENSOGAG00000000738HDLBP10080.314Otolemur_garnettii
ENSLOCG00000006278hdlbpa9978.142ENSOARG00000017870HDLBP10078.142Ovis_aries
ENSLOCG00000006278hdlbpa9980.471ENSPPAG00000023318HDLBP10080.471Pan_paniscus
ENSLOCG00000006278hdlbpa9980.549ENSPPRG00000010215HDLBP10080.549Panthera_pardus
ENSLOCG00000006278hdlbpa9380.549ENSPTIG00000009328HDLBP9780.549Panthera_tigris_altaica
ENSLOCG00000006278hdlbpa9980.549ENSPTRG00000013121HDLBP10080.549Pan_troglodytes
ENSLOCG00000006278hdlbpa9980.549ENSPANG00000011832HDLBP10080.549Papio_anubis
ENSLOCG00000006278hdlbpa10088.627ENSPKIG00000002392hdlbpa10088.627Paramormyrops_kingsleyae
ENSLOCG00000006278hdlbpa9482.889ENSPSIG00000010068HDLBP10082.889Pelodiscus_sinensis
ENSLOCG00000006278hdlbpa10075.179ENSPMGG00000002102hdlbpa10075.179Periophthalmus_magnuspinnatus
ENSLOCG00000006278hdlbpa9980.863ENSPEMG00000017704Hdlbp10080.863Peromyscus_maniculatus_bairdii
ENSLOCG00000006278hdlbpa9982.213ENSPCIG00000015375HDLBP9482.213Phascolarctos_cinereus
ENSLOCG00000006278hdlbpa10086.431ENSPFOG00000000236hdlbpa10086.431Poecilia_formosa
ENSLOCG00000006278hdlbpa9586.971ENSPLAG00000006033hdlbpa10087.137Poecilia_latipinna
ENSLOCG00000006278hdlbpa10086.275ENSPMEG00000006627hdlbpa10086.431Poecilia_mexicana
ENSLOCG00000006278hdlbpa10064.175ENSPREG00000014450hdlbpa10065.084Poecilia_reticulata
ENSLOCG00000006278hdlbpa9980.627ENSPPYG00000013351HDLBP10080.627Pongo_abelii
ENSLOCG00000006278hdlbpa9974.140ENSPCAG00000011136HDLBP7974.140Procavia_capensis
ENSLOCG00000006278hdlbpa9970.457ENSPCOG00000021622HDLBP10070.457Propithecus_coquereli
ENSLOCG00000006278hdlbpa9979.811ENSPVAG00000000555HDLBP10079.811Pteropus_vampyrus
ENSLOCG00000006278hdlbpa10088.000ENSPNYG00000020753hdlbpa10088.157Pundamilia_nyererei
ENSLOCG00000006278hdlbpa10084.561ENSPNAG00000029610hdlbpa10085.266Pygocentrus_nattereri
ENSLOCG00000006278hdlbpa8943.792ENSRNOG00000028847AABR07040251.110043.792Rattus_norvegicus
ENSLOCG00000006278hdlbpa9743.700ENSRNOG00000031294RGD15631049843.700Rattus_norvegicus
ENSLOCG00000006278hdlbpa9980.706ENSRNOG00000031479Hdlbp10080.706Rattus_norvegicus
ENSLOCG00000006278hdlbpa9141.981ENSRNOG00000042823RGD15612309341.981Rattus_norvegicus
ENSLOCG00000006278hdlbpa9980.627ENSRBIG00000041381HDLBP10080.627Rhinopithecus_bieti
ENSLOCG00000006278hdlbpa9980.627ENSRROG00000034263HDLBP10080.627Rhinopithecus_roxellana
ENSLOCG00000006278hdlbpa9171.392ENSSBOG00000033067-9671.367Saimiri_boliviensis_boliviensis
ENSLOCG00000006278hdlbpa9980.298ENSSBOG00000029714-9979.564Saimiri_boliviensis_boliviensis
ENSLOCG00000006278hdlbpa9982.118ENSSHAG00000012422HDLBP10082.118Sarcophilus_harrisii
ENSLOCG00000006278hdlbpa10090.353ENSSFOG00015018627hdlbp10090.353Scleropages_formosus
ENSLOCG00000006278hdlbpa10086.604ENSSMAG00000002382hdlbpa10086.760Scophthalmus_maximus
ENSLOCG00000006278hdlbpa10088.410ENSSDUG00000022258hdlbpa10088.410Seriola_dumerili
ENSLOCG00000006278hdlbpa10088.332ENSSLDG00000004437hdlbpa10088.332Seriola_lalandi_dorsalis
ENSLOCG00000006278hdlbpa9469.463ENSSARG00000012639HDLBP9469.463Sorex_araneus
ENSLOCG00000006278hdlbpa9981.240ENSSPUG00000009182HDLBP10081.240Sphenodon_punctatus
ENSLOCG00000006278hdlbpa10087.618ENSSPAG00000009145hdlbpa10087.774Stegastes_partitus
ENSLOCG00000006278hdlbpa9980.078ENSSSCG00000016379HDLBP10081.202Sus_scrofa
ENSLOCG00000006278hdlbpa9684.049ENSTGUG00000006189HDLBP10084.049Taeniopygia_guttata
ENSLOCG00000006278hdlbpa10086.321ENSTRUG00000012148hdlbpa10086.321Takifugu_rubripes
ENSLOCG00000006278hdlbpa9986.407ENSTNIG00000004185hdlbpa10086.407Tetraodon_nigroviridis
ENSLOCG00000006278hdlbpa9073.981ENSTBEG00000001860HDLBP8873.981Tupaia_belangeri
ENSLOCG00000006278hdlbpa9981.239ENSTTRG00000015251HDLBP7781.239Tursiops_truncatus
ENSLOCG00000006278hdlbpa9980.863ENSUAMG00000018383HDLBP10081.074Ursus_americanus
ENSLOCG00000006278hdlbpa9980.784ENSUMAG00000010539HDLBP10080.784Ursus_maritimus
ENSLOCG00000006278hdlbpa9256.589ENSVPAG00000003112HDLBP9356.589Vicugna_pacos
ENSLOCG00000006278hdlbpa9481.513ENSVVUG00000022797HDLBP9981.513Vulpes_vulpes
ENSLOCG00000006278hdlbpa9978.712ENSXETG00000012164hdlbp9978.712Xenopus_tropicalis
ENSLOCG00000006278hdlbpa10085.793ENSXCOG00000005943hdlbpa10085.793Xiphophorus_couchianus
ENSLOCG00000006278hdlbpa10085.781ENSXMAG00000003787hdlbpa10085.938Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us