EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLOCG00000006324 (Gene tree)
Gene ID: 102685020
Gene Symbol: cnot1
Alias: cdc39-like|im:7141761|kiaa1007l|wu:fc58h04|zgc:152902
Full Name: CCR4-NOT transcription complex subunit 1
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 24648 bases
Position: chrLG23:12865928-12890575
Accession: 102685020
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000007644	Not1	PF04054.15	2.7e-153	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000007653	-	9186	XM_006641392	ENSLOCP00000007644	2376 (aa)	XP_006641455	W5MGY5

Gene Model

Click here to download ENSLOCG00000006324's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000006324's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000006324	cnot1	100	93.274	ENSG00000125107	CNOT1	100	100.000	Homo_sapiens
ENSLOCG00000006324	cnot1	97	99.299	ENSAPOG00000005042	cnot1	100	99.299	Acanthochromis_polyacanthus
ENSLOCG00000006324	cnot1	100	93.274	ENSAMEG00000017298	CNOT1	100	93.274	Ailuropoda_melanoleuca
ENSLOCG00000006324	cnot1	90	93.762	ENSACIG00000016003	cnot1	100	93.669	Amphilophus_citrinellus
ENSLOCG00000006324	cnot1	100	93.708	ENSAPEG00000022342	cnot1	100	93.705	Amphiprion_percula
ENSLOCG00000006324	cnot1	97	99.439	ENSATEG00000012892	cnot1	100	99.439	Anabas_testudineus
ENSLOCG00000006324	cnot1	100	92.588	ENSAPLG00000007162	CNOT1	100	92.588	Anas_platyrhynchos
ENSLOCG00000006324	cnot1	91	91.405	ENSACAG00000001602	CNOT1	98	91.148	Anolis_carolinensis
ENSLOCG00000006324	cnot1	100	90.188	ENSANAG00000038198	CNOT1	100	90.188	Aotus_nancymaae
ENSLOCG00000006324	cnot1	97	99.439	ENSACLG00000014234	cnot1	100	99.439	Astatotilapia_calliptera
ENSLOCG00000006324	cnot1	100	94.491	ENSAMXG00000013170	cnot1	100	94.746	Astyanax_mexicanus
ENSLOCG00000006324	cnot1	100	93.037	ENSBTAG00000020782	CNOT1	100	96.607	Bos_taurus
ENSLOCG00000006324	cnot1	78	41.487	WBGene00002845	let-711	92	54.008	Caenorhabditis_elegans
ENSLOCG00000006324	cnot1	100	92.911	ENSCJAG00000011318	CNOT1	100	92.911	Callithrix_jacchus
ENSLOCG00000006324	cnot1	100	92.675	ENSCAFG00000008426	CNOT1	100	92.675	Canis_familiaris
ENSLOCG00000006324	cnot1	100	92.018	ENSCAFG00020010156	CNOT1	100	94.044	Canis_lupus_dingo
ENSLOCG00000006324	cnot1	100	93.037	ENSCHIG00000010452	CNOT1	100	93.037	Capra_hircus
ENSLOCG00000006324	cnot1	100	93.037	ENSTSYG00000006888	CNOT1	100	93.037	Carlito_syrichta
ENSLOCG00000006324	cnot1	100	89.178	ENSCPOG00000013026	CNOT1	100	89.178	Cavia_porcellus
ENSLOCG00000006324	cnot1	100	91.401	ENSCCAG00000026333	CNOT1	100	91.401	Cebus_capucinus
ENSLOCG00000006324	cnot1	100	92.995	ENSCATG00000032625	CNOT1	100	92.995	Cercocebus_atys
ENSLOCG00000006324	cnot1	100	93.037	ENSCLAG00000006289	CNOT1	100	93.037	Chinchilla_lanigera
ENSLOCG00000006324	cnot1	100	92.995	ENSCSAG00000004731	CNOT1	100	92.995	Chlorocebus_sabaeus
ENSLOCG00000006324	cnot1	80	97.880	ENSCHOG00000009712	CNOT1	83	97.880	Choloepus_hoffmanni
ENSLOCG00000006324	cnot1	93	96.040	ENSCPBG00000026222	CNOT1	98	96.040	Chrysemys_picta_bellii
ENSLOCG00000006324	cnot1	100	58.999	ENSCING00000009149	-	100	58.741	Ciona_intestinalis
ENSLOCG00000006324	cnot1	89	63.160	ENSCSAVG00000002414	-	95	79.470	Ciona_savignyi
ENSLOCG00000006324	cnot1	100	91.129	ENSCANG00000040534	CNOT1	100	91.129	Colobus_angolensis_palliatus
ENSLOCG00000006324	cnot1	100	92.827	ENSCGRG00001016365	Cnot1	100	92.785	Cricetulus_griseus_chok1gshd
ENSLOCG00000006324	cnot1	100	92.827	ENSCGRG00000001714	Cnot1	100	92.785	Cricetulus_griseus_crigri
ENSLOCG00000006324	cnot1	100	88.689	ENSCVAG00000018930	cnot1	100	87.875	Cyprinodon_variegatus
ENSLOCG00000006324	cnot1	100	93.868	ENSDARG00000004174	cnot1	100	94.204	Danio_rerio
ENSLOCG00000006324	cnot1	100	90.688	ENSDNOG00000013250	CNOT1	100	90.688	Dasypus_novemcinctus
ENSLOCG00000006324	cnot1	99	45.679	FBgn0085436	Not1	99	47.879	Drosophila_melanogaster
ENSLOCG00000006324	cnot1	84	95.030	ENSETEG00000012806	CNOT1	84	95.030	Echinops_telfairi
ENSLOCG00000006324	cnot1	81	76.042	ENSEBUG00000011534	cnot1	95	76.042	Eptatretus_burgeri
ENSLOCG00000006324	cnot1	97	96.250	ENSEASG00005005819	CNOT1	100	96.607	Equus_asinus_asinus
ENSLOCG00000006324	cnot1	97	97.195	ENSECAG00000009889	CNOT1	100	97.195	Equus_caballus
ENSLOCG00000006324	cnot1	89	92.241	ENSEEUG00000006015	CNOT1	90	92.241	Erinaceus_europaeus
ENSLOCG00000006324	cnot1	100	93.986	ENSELUG00000014085	cnot1	100	94.362	Esox_lucius
ENSLOCG00000006324	cnot1	100	92.765	ENSFCAG00000025155	CNOT1	100	92.765	Felis_catus
ENSLOCG00000006324	cnot1	100	92.701	ENSFALG00000007285	CNOT1	100	92.701	Ficedula_albicollis
ENSLOCG00000006324	cnot1	100	92.995	ENSFDAG00000013399	CNOT1	100	92.995	Fukomys_damarensis
ENSLOCG00000006324	cnot1	100	92.833	ENSFHEG00000020574	cnot1	100	92.749	Fundulus_heteroclitus
ENSLOCG00000006324	cnot1	91	93.649	ENSGMOG00000012864	cnot1	100	93.788	Gadus_morhua
ENSLOCG00000006324	cnot1	100	92.617	ENSGALG00000002301	CNOT1	100	92.617	Gallus_gallus
ENSLOCG00000006324	cnot1	100	92.065	ENSGAFG00000015005	cnot1	100	92.065	Gambusia_affinis
ENSLOCG00000006324	cnot1	91	94.115	ENSGACG00000002606	cnot1	100	98.182	Gasterosteus_aculeatus
ENSLOCG00000006324	cnot1	100	92.495	ENSGAGG00000022646	CNOT1	100	93.205	Gopherus_agassizii
ENSLOCG00000006324	cnot1	100	93.079	ENSGGOG00000009547	CNOT1	100	93.079	Gorilla_gorilla
ENSLOCG00000006324	cnot1	97	99.439	ENSHBUG00000001729	cnot1	100	99.439	Haplochromis_burtoni
ENSLOCG00000006324	cnot1	100	92.953	ENSHGLG00000014322	CNOT1	100	92.953	Heterocephalus_glaber_female
ENSLOCG00000006324	cnot1	100	92.920	ENSHCOG00000006501	cnot1	100	93.004	Hippocampus_comes
ENSLOCG00000006324	cnot1	100	91.911	ENSIPUG00000011915	cnot1	100	92.414	Ictalurus_punctatus
ENSLOCG00000006324	cnot1	100	92.869	ENSSTOG00000005490	CNOT1	100	92.869	Ictidomys_tridecemlineatus
ENSLOCG00000006324	cnot1	100	92.366	ENSJJAG00000000633	Cnot1	100	92.366	Jaculus_jaculus
ENSLOCG00000006324	cnot1	100	94.044	ENSKMAG00000006149	cnot1	100	94.044	Kryptolebias_marmoratus
ENSLOCG00000006324	cnot1	95	98.603	ENSLBEG00000004740	cnot1	100	98.603	Labrus_bergylta
ENSLOCG00000006324	cnot1	100	93.540	ENSLACG00000010869	CNOT1	100	93.498	Latimeria_chalumnae
ENSLOCG00000006324	cnot1	100	92.875	ENSLAFG00000000098	CNOT1	100	92.875	Loxodonta_africana
ENSLOCG00000006324	cnot1	100	93.232	ENSMFAG00000035888	CNOT1	100	93.232	Macaca_fascicularis
ENSLOCG00000006324	cnot1	100	93.037	ENSMMUG00000014625	CNOT1	100	93.037	Macaca_mulatta
ENSLOCG00000006324	cnot1	100	90.464	ENSMNEG00000031820	CNOT1	100	92.741	Macaca_nemestrina
ENSLOCG00000006324	cnot1	100	91.635	ENSMLEG00000040933	CNOT1	100	91.635	Mandrillus_leucophaeus
ENSLOCG00000006324	cnot1	100	92.321	ENSMAMG00000016524	cnot1	100	92.321	Mastacembelus_armatus
ENSLOCG00000006324	cnot1	97	99.439	ENSMZEG00005016210	cnot1	100	99.439	Maylandia_zebra
ENSLOCG00000006324	cnot1	100	92.854	ENSMGAG00000001908	CNOT1	100	92.854	Meleagris_gallopavo
ENSLOCG00000006324	cnot1	100	92.740	ENSMICG00000007071	CNOT1	100	92.827	Microcebus_murinus
ENSLOCG00000006324	cnot1	100	92.785	ENSMOCG00000017969	Cnot1	100	92.743	Microtus_ochrogaster
ENSLOCG00000006324	cnot1	97	96.073	ENSMMOG00000019134	cnot1	100	96.073	Mola_mola
ENSLOCG00000006324	cnot1	100	92.872	ENSMODG00000014199	CNOT1	100	92.872	Monodelphis_domestica
ENSLOCG00000006324	cnot1	100	93.202	ENSMALG00000008645	cnot1	100	93.202	Monopterus_albus
ENSLOCG00000006324	cnot1	95	98.095	MGP_CAROLIEiJ_G0031430	Cnot1	92	98.095	Mus_caroli
ENSLOCG00000006324	cnot1	100	92.938	ENSMUSG00000036550	Cnot1	100	92.896	Mus_musculus
ENSLOCG00000006324	cnot1	100	92.827	MGP_PahariEiJ_G0023028	Cnot1	100	92.785	Mus_pahari
ENSLOCG00000006324	cnot1	100	92.785	MGP_SPRETEiJ_G0032549	Cnot1	100	92.743	Mus_spretus
ENSLOCG00000006324	cnot1	100	93.037	ENSMPUG00000004830	CNOT1	100	93.037	Mustela_putorius_furo
ENSLOCG00000006324	cnot1	100	92.827	ENSMLUG00000003728	CNOT1	100	92.827	Myotis_lucifugus
ENSLOCG00000006324	cnot1	100	92.869	ENSNGAG00000018628	Cnot1	100	92.869	Nannospalax_galili
ENSLOCG00000006324	cnot1	94	99.439	ENSNBRG00000019358	cnot1	100	99.439	Neolamprologus_brichardi
ENSLOCG00000006324	cnot1	100	93.076	ENSNLEG00000003566	CNOT1	100	93.076	Nomascus_leucogenys
ENSLOCG00000006324	cnot1	87	94.444	ENSMEUG00000006145	CNOT1	88	94.444	Notamacropus_eugenii
ENSLOCG00000006324	cnot1	86	99.029	ENSOPRG00000005604	CNOT1	86	99.029	Ochotona_princeps
ENSLOCG00000006324	cnot1	100	92.953	ENSODEG00000016337	CNOT1	100	92.953	Octodon_degus
ENSLOCG00000006324	cnot1	100	94.332	ENSONIG00000007358	cnot1	100	94.207	Oreochromis_niloticus
ENSLOCG00000006324	cnot1	91	92.665	ENSOANG00000012109	CNOT1	100	92.553	Ornithorhynchus_anatinus
ENSLOCG00000006324	cnot1	100	92.953	ENSOCUG00000006911	CNOT1	100	92.953	Oryctolagus_cuniculus
ENSLOCG00000006324	cnot1	100	93.456	ENSORLG00000013734	cnot1	100	93.417	Oryzias_latipes
ENSLOCG00000006324	cnot1	100	91.768	ENSORLG00020017012	cnot1	100	91.726	Oryzias_latipes_hni
ENSLOCG00000006324	cnot1	100	91.684	ENSORLG00015007091	cnot1	100	91.600	Oryzias_latipes_hsok
ENSLOCG00000006324	cnot1	100	90.943	ENSOMEG00000015124	cnot1	100	91.447	Oryzias_melastigma
ENSLOCG00000006324	cnot1	100	92.953	ENSOGAG00000000543	CNOT1	100	92.953	Otolemur_garnettii
ENSLOCG00000006324	cnot1	100	93.037	ENSOARG00000001567	CNOT1	100	93.037	Ovis_aries
ENSLOCG00000006324	cnot1	100	93.037	ENSPPAG00000022013	CNOT1	100	93.037	Pan_paniscus
ENSLOCG00000006324	cnot1	100	93.037	ENSPPRG00000004867	CNOT1	100	93.037	Panthera_pardus
ENSLOCG00000006324	cnot1	100	93.037	ENSPTIG00000012589	CNOT1	100	93.037	Panthera_tigris_altaica
ENSLOCG00000006324	cnot1	100	92.765	ENSPTRG00000008183	CNOT1	100	92.765	Pan_troglodytes
ENSLOCG00000006324	cnot1	100	89.804	ENSPANG00000020901	CNOT1	100	89.804	Papio_anubis
ENSLOCG00000006324	cnot1	97	94.803	ENSPKIG00000002914	CNOT1	99	94.803	Paramormyrops_kingsleyae
ENSLOCG00000006324	cnot1	100	96.299	ENSPKIG00000023538	CNOT1	100	96.299	Paramormyrops_kingsleyae
ENSLOCG00000006324	cnot1	100	92.659	ENSPSIG00000005499	CNOT1	100	92.659	Pelodiscus_sinensis
ENSLOCG00000006324	cnot1	100	80.285	ENSPMAG00000009381	cnot1	100	80.503	Petromyzon_marinus
ENSLOCG00000006324	cnot1	100	92.684	ENSPCIG00000007343	CNOT1	100	96.806	Phascolarctos_cinereus
ENSLOCG00000006324	cnot1	99	92.797	ENSPFOG00000003497	cnot1	100	92.839	Poecilia_formosa
ENSLOCG00000006324	cnot1	95	98.004	ENSPLAG00000014018	cnot1	100	98.004	Poecilia_latipinna
ENSLOCG00000006324	cnot1	95	98.004	ENSPMEG00000005868	cnot1	100	98.004	Poecilia_mexicana
ENSLOCG00000006324	cnot1	95	98.004	ENSPREG00000018793	cnot1	100	98.004	Poecilia_reticulata
ENSLOCG00000006324	cnot1	100	93.079	ENSPPYG00000007410	CNOT1	100	93.079	Pongo_abelii
ENSLOCG00000006324	cnot1	87	92.553	ENSPCAG00000003241	CNOT1	88	92.553	Procavia_capensis
ENSLOCG00000006324	cnot1	100	92.427	ENSPCOG00000027139	CNOT1	100	92.555	Propithecus_coquereli
ENSLOCG00000006324	cnot1	100	90.310	ENSPVAG00000004243	CNOT1	100	90.520	Pteropus_vampyrus
ENSLOCG00000006324	cnot1	97	99.439	ENSPNYG00000012919	cnot1	100	99.439	Pundamilia_nyererei
ENSLOCG00000006324	cnot1	100	93.148	ENSPNAG00000000246	cnot1	100	93.569	Pygocentrus_nattereri
ENSLOCG00000006324	cnot1	100	92.785	ENSRNOG00000012271	Cnot1	100	92.743	Rattus_norvegicus
ENSLOCG00000006324	cnot1	100	90.882	ENSRBIG00000044598	CNOT1	100	90.882	Rhinopithecus_bieti
ENSLOCG00000006324	cnot1	100	92.995	ENSRROG00000000906	CNOT1	100	92.995	Rhinopithecus_roxellana
ENSLOCG00000006324	cnot1	57	30.480	YCR093W	CDC39	68	33.333	Saccharomyces_cerevisiae
ENSLOCG00000006324	cnot1	100	88.778	ENSSBOG00000029155	CNOT1	100	88.778	Saimiri_boliviensis_boliviensis
ENSLOCG00000006324	cnot1	100	92.875	ENSSHAG00000012187	CNOT1	100	92.833	Sarcophilus_harrisii
ENSLOCG00000006324	cnot1	100	93.842	ENSSFOG00015017614	cnot1	100	93.716	Scleropages_formosus
ENSLOCG00000006324	cnot1	97	99.439	ENSSMAG00000013844	cnot1	100	99.439	Scophthalmus_maximus
ENSLOCG00000006324	cnot1	97	99.299	ENSSDUG00000021491	cnot1	100	99.299	Seriola_dumerili
ENSLOCG00000006324	cnot1	97	99.299	ENSSLDG00000014816	cnot1	100	99.299	Seriola_lalandi_dorsalis
ENSLOCG00000006324	cnot1	84	98.000	ENSSARG00000000762	CNOT1	88	98.000	Sorex_araneus
ENSLOCG00000006324	cnot1	100	93.328	ENSSPAG00000018802	cnot1	100	93.663	Stegastes_partitus
ENSLOCG00000006324	cnot1	97	96.250	ENSSSCG00000002799	CNOT1	100	96.607	Sus_scrofa
ENSLOCG00000006324	cnot1	100	92.711	ENSTGUG00000005919	CNOT1	100	92.711	Taeniopygia_guttata
ENSLOCG00000006324	cnot1	100	92.600	ENSTNIG00000018706	cnot1	100	92.349	Tetraodon_nigroviridis
ENSLOCG00000006324	cnot1	80	97.183	ENSTBEG00000000720	CNOT1	80	97.183	Tupaia_belangeri
ENSLOCG00000006324	cnot1	95	92.401	ENSTTRG00000008460	CNOT1	95	92.401	Tursiops_truncatus
ENSLOCG00000006324	cnot1	100	93.037	ENSUAMG00000009251	CNOT1	100	93.037	Ursus_americanus
ENSLOCG00000006324	cnot1	100	93.037	ENSUMAG00000021291	CNOT1	100	93.037	Ursus_maritimus
ENSLOCG00000006324	cnot1	97	93.066	ENSVPAG00000008846	CNOT1	97	93.066	Vicugna_pacos
ENSLOCG00000006324	cnot1	100	92.018	ENSVVUG00000024037	CNOT1	100	94.044	Vulpes_vulpes
ENSLOCG00000006324	cnot1	100	87.374	ENSXETG00000015900	cnot1	100	87.301	Xenopus_tropicalis
ENSLOCG00000006324	cnot1	100	92.191	ENSXCOG00000013552	cnot1	100	92.191	Xiphophorus_couchianus
ENSLOCG00000006324	cnot1	100	92.233	ENSXMAG00000006031	cnot1	100	92.233	Xiphophorus_maculatus