EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLOCG00000006479 (Gene tree)
Gene ID: -
Gene Symbol: trmt1
Alias: im:7150454
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 8651 bases
Position: chrLG6:13122097-13130747
Accession: 102693888
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000007830	TRM	PF02005.16	8.7e-141	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000007840	-	1671	XM_006631547	ENSLOCP00000007830	557 (aa)	-	W5MHH1

Gene Model

Click here to download ENSLOCG00000006479's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000006479's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000006479	trmt1	97	63.793	ENSG00000104907	TRMT1	99	73.545	Homo_sapiens
ENSLOCG00000006479	trmt1	97	62.759	ENSAMEG00000012598	TRMT1	85	62.241	Ailuropoda_melanoleuca
ENSLOCG00000006479	trmt1	99	63.986	ENSACIG00000018680	trmt1	89	63.986	Amphilophus_citrinellus
ENSLOCG00000006479	trmt1	99	71.503	ENSAOCG00000006781	trmt1	86	71.503	Amphiprion_ocellaris
ENSLOCG00000006479	trmt1	99	71.503	ENSAPEG00000007712	trmt1	86	71.503	Amphiprion_percula
ENSLOCG00000006479	trmt1	99	71.053	ENSATEG00000001872	trmt1	85	71.053	Anabas_testudineus
ENSLOCG00000006479	trmt1	97	61.806	ENSACAG00000003825	TRMT1	92	61.806	Anolis_carolinensis
ENSLOCG00000006479	trmt1	97	63.398	ENSANAG00000023016	TRMT1	92	62.872	Aotus_nancymaae
ENSLOCG00000006479	trmt1	99	68.651	ENSACLG00000010073	trmt1	93	68.651	Astatotilapia_calliptera
ENSLOCG00000006479	trmt1	100	68.367	ENSAMXG00000012026	trmt1	88	68.367	Astyanax_mexicanus
ENSLOCG00000006479	trmt1	97	63.103	ENSBTAG00000019325	TRMT1	81	62.500	Bos_taurus
ENSLOCG00000006479	trmt1	82	43.070	WBGene00006613	trm-1	85	43.070	Caenorhabditis_elegans
ENSLOCG00000006479	trmt1	84	69.792	ENSCJAG00000004566	TRMT1	74	69.792	Callithrix_jacchus
ENSLOCG00000006479	trmt1	99	62.139	ENSCAFG00000017070	TRMT1	91	61.630	Canis_familiaris
ENSLOCG00000006479	trmt1	99	61.724	ENSCAFG00020005397	TRMT1	89	61.092	Canis_lupus_dingo
ENSLOCG00000006479	trmt1	97	63.058	ENSCHIG00000013569	TRMT1	73	70.747	Capra_hircus
ENSLOCG00000006479	trmt1	97	64.374	ENSTSYG00000003207	TRMT1	87	63.845	Carlito_syrichta
ENSLOCG00000006479	trmt1	90	61.272	ENSCAPG00000003355	TRMT1	94	60.037	Cavia_aperea
ENSLOCG00000006479	trmt1	97	61.512	ENSCPOG00000011754	TRMT1	87	61.379	Cavia_porcellus
ENSLOCG00000006479	trmt1	97	61.996	ENSCCAG00000022263	TRMT1	92	61.821	Cebus_capucinus
ENSLOCG00000006479	trmt1	80	57.576	ENSCATG00000038220	-	83	57.576	Cercocebus_atys
ENSLOCG00000006479	trmt1	97	64.138	ENSCATG00000039850	TRMT1	86	63.621	Cercocebus_atys
ENSLOCG00000006479	trmt1	97	63.558	ENSCLAG00000015295	TRMT1	89	62.587	Chinchilla_lanigera
ENSLOCG00000006479	trmt1	82	72.152	ENSCSAG00000006500	TRMT1	89	72.152	Chlorocebus_sabaeus
ENSLOCG00000006479	trmt1	84	71.967	ENSCPBG00000023866	TRMT1	72	72.385	Chrysemys_picta_bellii
ENSLOCG00000006479	trmt1	83	48.632	ENSCING00000002884	-	84	48.632	Ciona_intestinalis
ENSLOCG00000006479	trmt1	82	51.316	ENSCSAVG00000010927	-	88	47.548	Ciona_savignyi
ENSLOCG00000006479	trmt1	94	50.358	ENSCANG00000031650	-	86	50.360	Colobus_angolensis_palliatus
ENSLOCG00000006479	trmt1	97	50.000	ENSCANG00000040631	TRMT1	69	56.347	Colobus_angolensis_palliatus
ENSLOCG00000006479	trmt1	97	60.554	ENSCGRG00001022594	Trmt1	87	59.794	Cricetulus_griseus_chok1gshd
ENSLOCG00000006479	trmt1	97	60.554	ENSCGRG00000017732	Trmt1	86	59.794	Cricetulus_griseus_crigri
ENSLOCG00000006479	trmt1	99	67.652	ENSCSEG00000001643	trmt1	79	75.726	Cynoglossus_semilaevis
ENSLOCG00000006479	trmt1	99	69.565	ENSCVAG00000011886	trmt1	88	69.565	Cyprinodon_variegatus
ENSLOCG00000006479	trmt1	98	68.158	ENSDARG00000010978	trmt1	86	66.271	Danio_rerio
ENSLOCG00000006479	trmt1	69	44.389	ENSDNOG00000048240	-	68	44.389	Dasypus_novemcinctus
ENSLOCG00000006479	trmt1	97	60.929	ENSDORG00000014298	Trmt1	87	60.000	Dipodomys_ordii
ENSLOCG00000006479	trmt1	84	50.939	FBgn0032430	CG6388	82	50.939	Drosophila_melanogaster
ENSLOCG00000006479	trmt1	82	53.728	ENSEBUG00000003449	trmt1	67	53.846	Eptatretus_burgeri
ENSLOCG00000006479	trmt1	97	62.414	ENSEASG00005004050	TRMT1	90	62.241	Equus_asinus_asinus
ENSLOCG00000006479	trmt1	97	62.027	ENSECAG00000016149	TRMT1	90	62.027	Equus_caballus
ENSLOCG00000006479	trmt1	99	67.814	ENSELUG00000021659	trmt1	87	67.814	Esox_lucius
ENSLOCG00000006479	trmt1	97	62.931	ENSFCAG00000000483	TRMT1	87	62.241	Felis_catus
ENSLOCG00000006479	trmt1	97	63.558	ENSFDAG00000007386	TRMT1	86	63.040	Fukomys_damarensis
ENSLOCG00000006479	trmt1	84	78.423	ENSFHEG00000012865	trmt1	80	78.216	Fundulus_heteroclitus
ENSLOCG00000006479	trmt1	98	64.716	ENSGMOG00000006564	trmt1	99	64.134	Gadus_morhua
ENSLOCG00000006479	trmt1	99	71.880	ENSGAFG00000011862	trmt1	89	72.056	Gambusia_affinis
ENSLOCG00000006479	trmt1	98	69.808	ENSGACG00000000227	trmt1	92	69.808	Gasterosteus_aculeatus
ENSLOCG00000006479	trmt1	97	64.298	ENSGAGG00000016432	TRMT1	75	71.882	Gopherus_agassizii
ENSLOCG00000006479	trmt1	97	63.793	ENSGGOG00000014007	TRMT1	87	63.276	Gorilla_gorilla
ENSLOCG00000006479	trmt1	95	61.338	ENSHBUG00000008821	trmt1	77	68.989	Haplochromis_burtoni
ENSLOCG00000006479	trmt1	97	62.176	ENSHGLG00000015972	TRMT1	87	62.176	Heterocephalus_glaber_female
ENSLOCG00000006479	trmt1	97	63.734	ENSHGLG00100018112	TRMT1	87	63.555	Heterocephalus_glaber_male
ENSLOCG00000006479	trmt1	98	67.372	ENSHCOG00000009447	trmt1	88	67.372	Hippocampus_comes
ENSLOCG00000006479	trmt1	99	66.387	ENSIPUG00000002899	trmt1	87	66.387	Ictalurus_punctatus
ENSLOCG00000006479	trmt1	99	62.692	ENSSTOG00000012531	TRMT1	89	62.521	Ictidomys_tridecemlineatus
ENSLOCG00000006479	trmt1	97	63.465	ENSJJAG00000017154	Trmt1	88	63.293	Jaculus_jaculus
ENSLOCG00000006479	trmt1	99	70.629	ENSKMAG00000011809	trmt1	96	69.718	Kryptolebias_marmoratus
ENSLOCG00000006479	trmt1	98	69.894	ENSLBEG00000012703	trmt1	85	69.894	Labrus_bergylta
ENSLOCG00000006479	trmt1	98	53.565	ENSLACG00000014585	TRMT1	94	53.565	Latimeria_chalumnae
ENSLOCG00000006479	trmt1	97	63.276	ENSLAFG00000014072	TRMT1	88	62.500	Loxodonta_africana
ENSLOCG00000006479	trmt1	97	64.138	ENSMFAG00000033143	TRMT1	86	63.276	Macaca_fascicularis
ENSLOCG00000006479	trmt1	97	62.811	ENSMMUG00000001167	TRMT1	87	62.811	Macaca_mulatta
ENSLOCG00000006479	trmt1	97	63.966	ENSMNEG00000037867	TRMT1	86	63.448	Macaca_nemestrina
ENSLOCG00000006479	trmt1	97	63.793	ENSMLEG00000016142	TRMT1	87	63.276	Mandrillus_leucophaeus
ENSLOCG00000006479	trmt1	99	71.951	ENSMAMG00000004357	trmt1	86	71.951	Mastacembelus_armatus
ENSLOCG00000006479	trmt1	99	69.002	ENSMZEG00005014510	trmt1	86	69.002	Maylandia_zebra
ENSLOCG00000006479	trmt1	97	61.217	ENSMAUG00000011134	Trmt1	87	61.217	Mesocricetus_auratus
ENSLOCG00000006479	trmt1	97	63.918	ENSMICG00000000793	TRMT1	86	63.918	Microcebus_murinus
ENSLOCG00000006479	trmt1	97	61.938	ENSMOCG00000015895	Trmt1	86	60.825	Microtus_ochrogaster
ENSLOCG00000006479	trmt1	99	70.796	ENSMMOG00000011097	trmt1	93	70.796	Mola_mola
ENSLOCG00000006479	trmt1	98	61.565	ENSMODG00000011619	TRMT1	93	61.565	Monodelphis_domestica
ENSLOCG00000006479	trmt1	97	62.153	MGP_CAROLIEiJ_G0031304	Trmt1	87	66.079	Mus_caroli
ENSLOCG00000006479	trmt1	97	62.153	ENSMUSG00000001909	Trmt1	87	66.079	Mus_musculus
ENSLOCG00000006479	trmt1	97	61.806	MGP_SPRETEiJ_G0032422	Trmt1	87	65.639	Mus_spretus
ENSLOCG00000006479	trmt1	99	62.437	ENSMPUG00000004210	TRMT1	83	61.929	Mustela_putorius_furo
ENSLOCG00000006479	trmt1	97	62.887	ENSMLUG00000012809	TRMT1	72	70.393	Myotis_lucifugus
ENSLOCG00000006479	trmt1	97	62.414	ENSNGAG00000022486	Trmt1	86	62.414	Nannospalax_galili
ENSLOCG00000006479	trmt1	85	69.325	ENSNBRG00000024376	trmt1	86	69.325	Neolamprologus_brichardi
ENSLOCG00000006479	trmt1	76	67.577	ENSNLEG00000013019	-	83	67.577	Nomascus_leucogenys
ENSLOCG00000006479	trmt1	97	63.750	ENSMEUG00000013756	TRMT1	96	63.750	Notamacropus_eugenii
ENSLOCG00000006479	trmt1	81	74.000	ENSOPRG00000009471	-	72	74.000	Ochotona_princeps
ENSLOCG00000006479	trmt1	97	63.021	ENSODEG00000010323	TRMT1	87	62.607	Octodon_degus
ENSLOCG00000006479	trmt1	99	71.804	ENSONIG00000000400	trmt1	91	71.936	Oreochromis_niloticus
ENSLOCG00000006479	trmt1	82	70.316	ENSOCUG00000021934	TRMT1	90	70.737	Oryctolagus_cuniculus
ENSLOCG00000006479	trmt1	99	65.149	ENSORLG00000020074	trmt1	91	65.052	Oryzias_latipes
ENSLOCG00000006479	trmt1	99	68.476	ENSORLG00020007561	trmt1	90	68.007	Oryzias_latipes_hni
ENSLOCG00000006479	trmt1	99	68.651	ENSORLG00015006547	trmt1	87	68.651	Oryzias_latipes_hsok
ENSLOCG00000006479	trmt1	99	68.870	ENSOMEG00000019343	trmt1	88	68.870	Oryzias_melastigma
ENSLOCG00000006479	trmt1	97	63.058	ENSOGAG00000025576	TRMT1	90	63.058	Otolemur_garnettii
ENSLOCG00000006479	trmt1	97	49.573	ENSOARG00000009397	TRMT1	80	49.493	Ovis_aries
ENSLOCG00000006479	trmt1	97	55.613	ENSPPRG00000012117	TRMT1	87	56.131	Panthera_pardus
ENSLOCG00000006479	trmt1	74	67.003	ENSPTIG00000008833	TRMT1	83	67.003	Panthera_tigris_altaica
ENSLOCG00000006479	trmt1	95	47.652	ENSPTRG00000050421	-	89	47.652	Pan_troglodytes
ENSLOCG00000006479	trmt1	97	63.793	ENSPTRG00000010557	TRMT1	87	63.276	Pan_troglodytes
ENSLOCG00000006479	trmt1	76	58.691	ENSPANG00000034058	-	78	58.691	Papio_anubis
ENSLOCG00000006479	trmt1	97	64.138	ENSPANG00000009247	TRMT1	87	63.276	Papio_anubis
ENSLOCG00000006479	trmt1	99	72.615	ENSPKIG00000005309	trmt1	85	70.984	Paramormyrops_kingsleyae
ENSLOCG00000006479	trmt1	84	57.261	ENSPSIG00000008762	TRMT1	69	57.261	Pelodiscus_sinensis
ENSLOCG00000006479	trmt1	99	70.390	ENSPMGG00000019764	trmt1	91	70.567	Periophthalmus_magnuspinnatus
ENSLOCG00000006479	trmt1	97	61.724	ENSPEMG00000016247	Trmt1	86	61.301	Peromyscus_maniculatus_bairdii
ENSLOCG00000006479	trmt1	99	57.439	ENSPMAG00000004329	trmt1	91	56.846	Petromyzon_marinus
ENSLOCG00000006479	trmt1	97	64.057	ENSPCIG00000019273	TRMT1	88	64.057	Phascolarctos_cinereus
ENSLOCG00000006479	trmt1	99	71.178	ENSPFOG00000008527	trmt1	89	71.178	Poecilia_formosa
ENSLOCG00000006479	trmt1	99	71.150	ENSPLAG00000018788	trmt1	82	78.914	Poecilia_latipinna
ENSLOCG00000006479	trmt1	99	71.002	ENSPMEG00000013120	trmt1	89	71.002	Poecilia_mexicana
ENSLOCG00000006479	trmt1	99	69.649	ENSPREG00000000211	trmt1	86	69.825	Poecilia_reticulata
ENSLOCG00000006479	trmt1	97	63.621	ENSPPYG00000009622	TRMT1	73	71.102	Pongo_abelii
ENSLOCG00000006479	trmt1	97	58.103	ENSPCAG00000003698	TRMT1	87	57.363	Procavia_capensis
ENSLOCG00000006479	trmt1	97	63.448	ENSPCOG00000008653	TRMT1	87	62.671	Propithecus_coquereli
ENSLOCG00000006479	trmt1	97	63.103	ENSPVAG00000015076	TRMT1	87	62.586	Pteropus_vampyrus
ENSLOCG00000006479	trmt1	99	66.725	ENSPNYG00000013960	trmt1	93	66.725	Pundamilia_nyererei
ENSLOCG00000006479	trmt1	99	64.298	ENSPNAG00000024859	trmt1	89	64.298	Pygocentrus_nattereri
ENSLOCG00000006479	trmt1	97	61.979	ENSRNOG00000002914	Trmt1	89	61.207	Rattus_norvegicus
ENSLOCG00000006479	trmt1	94	48.195	ENSRBIG00000037505	-	87	47.670	Rhinopithecus_bieti
ENSLOCG00000006479	trmt1	97	63.966	ENSRBIG00000038324	TRMT1	86	63.103	Rhinopithecus_bieti
ENSLOCG00000006479	trmt1	97	63.966	ENSRROG00000028599	TRMT1	86	63.103	Rhinopithecus_roxellana
ENSLOCG00000006479	trmt1	94	47.834	ENSRROG00000031847	-	86	47.312	Rhinopithecus_roxellana
ENSLOCG00000006479	trmt1	82	38.703	YDR120C	-	83	38.703	Saccharomyces_cerevisiae
ENSLOCG00000006479	trmt1	97	62.347	ENSSBOG00000028861	TRMT1	92	62.172	Saimiri_boliviensis_boliviensis
ENSLOCG00000006479	trmt1	97	63.766	ENSSHAG00000014381	TRMT1	93	63.316	Sarcophilus_harrisii
ENSLOCG00000006479	trmt1	99	72.935	ENSSFOG00015004139	trmt1	85	72.935	Scleropages_formosus
ENSLOCG00000006479	trmt1	98	71.553	ENSSMAG00000021136	trmt1	86	71.553	Scophthalmus_maximus
ENSLOCG00000006479	trmt1	99	71.804	ENSSDUG00000012740	trmt1	85	71.804	Seriola_dumerili
ENSLOCG00000006479	trmt1	99	71.278	ENSSLDG00000005971	trmt1	85	71.278	Seriola_lalandi_dorsalis
ENSLOCG00000006479	trmt1	84	66.253	ENSSARG00000005138	TRMT1	85	66.253	Sorex_araneus
ENSLOCG00000006479	trmt1	97	51.175	ENSSPUG00000001084	TRMT1	89	51.625	Sphenodon_punctatus
ENSLOCG00000006479	trmt1	99	69.681	ENSSPAG00000007153	trmt1	95	69.043	Stegastes_partitus
ENSLOCG00000006479	trmt1	99	62.415	ENSSSCG00000013744	TRMT1	91	61.760	Sus_scrofa
ENSLOCG00000006479	trmt1	84	72.154	ENSTRUG00000010700	trmt1	74	71.894	Takifugu_rubripes
ENSLOCG00000006479	trmt1	98	71.043	ENSTNIG00000018808	trmt1	98	68.366	Tetraodon_nigroviridis
ENSLOCG00000006479	trmt1	97	59.386	ENSTTRG00000006379	TRMT1	87	58.793	Tursiops_truncatus
ENSLOCG00000006479	trmt1	97	63.176	ENSUAMG00000022911	TRMT1	93	60.938	Ursus_americanus
ENSLOCG00000006479	trmt1	97	62.241	ENSUMAG00000006027	TRMT1	90	62.069	Ursus_maritimus
ENSLOCG00000006479	trmt1	99	62.649	ENSVVUG00000024177	TRMT1	88	62.139	Vulpes_vulpes
ENSLOCG00000006479	trmt1	80	69.348	ENSXETG00000033863	TRMT1	92	69.348	Xenopus_tropicalis
ENSLOCG00000006479	trmt1	99	71.353	ENSXCOG00000015733	trmt1	89	71.529	Xiphophorus_couchianus
ENSLOCG00000006479	trmt1	98	70.796	ENSXMAG00000013823	trmt1	98	70.922	Xiphophorus_maculatus