EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLOCG00000006491 (Gene tree)
Gene ID: 102694710
Gene Symbol: TSR1
Alias: FLJ10534
Full Name: TSR1%2C ribosome maturation factor
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 10443 bases
Position: chrLG22:10280876-10291318
Accession: 102694710
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000007846	AARP2CN	PF08142.12	5.2e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000007856	TSR1-201	2742	XM_006641104	ENSLOCP00000007846	743 (aa)	-	W5MHI7

Gene Model

Click here to download ENSLOCG00000006491's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000006491's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000006491	TSR1	97	51.930	ENSG00000167721	TSR1	89	58.939	Homo_sapiens
ENSLOCG00000006491	TSR1	99	78.667	ENSAPOG00000020891	tsr1	93	78.667	Acanthochromis_polyacanthus
ENSLOCG00000006491	TSR1	88	57.567	ENSAMEG00000007599	TSR1	82	57.270	Ailuropoda_melanoleuca
ENSLOCG00000006491	TSR1	98	80.000	ENSACIG00000007090	tsr1	90	80.000	Amphilophus_citrinellus
ENSLOCG00000006491	TSR1	99	78.667	ENSAOCG00000023284	tsr1	93	78.667	Amphiprion_ocellaris
ENSLOCG00000006491	TSR1	91	63.805	ENSAPEG00000008452	tsr1	90	64.378	Amphiprion_percula
ENSLOCG00000006491	TSR1	99	81.333	ENSATEG00000021961	tsr1	91	81.333	Anabas_testudineus
ENSLOCG00000006491	TSR1	87	59.878	ENSAPLG00000013422	TSR1	88	60.152	Anas_platyrhynchos
ENSLOCG00000006491	TSR1	62	52.766	ENSACAG00000000859	TSR1	74	52.553	Anolis_carolinensis
ENSLOCG00000006491	TSR1	96	58.182	ENSANAG00000031071	TSR1	89	57.576	Aotus_nancymaae
ENSLOCG00000006491	TSR1	99	56.611	ENSACLG00000007595	tsr1	99	56.731	Astatotilapia_calliptera
ENSLOCG00000006491	TSR1	88	58.185	ENSBTAG00000004225	TSR1	82	58.569	Bos_taurus
ENSLOCG00000006491	TSR1	95	35.959	WBGene00006497	tag-151	95	36.086	Caenorhabditis_elegans
ENSLOCG00000006491	TSR1	95	57.360	ENSCJAG00000012456	TSR1	89	56.753	Callithrix_jacchus
ENSLOCG00000006491	TSR1	98	51.784	ENSCAFG00000002106	-	99	51.661	Canis_familiaris
ENSLOCG00000006491	TSR1	88	57.761	ENSCAFG00000019273	-	100	57.612	Canis_familiaris
ENSLOCG00000006491	TSR1	97	57.949	ENSCAFG00020009728	TSR1	90	57.801	Canis_lupus_dingo
ENSLOCG00000006491	TSR1	88	58.333	ENSCHIG00000023935	TSR1	82	58.718	Capra_hircus
ENSLOCG00000006491	TSR1	88	57.355	ENSTSYG00000005468	TSR1	82	56.761	Carlito_syrichta
ENSLOCG00000006491	TSR1	80	57.423	ENSCPOG00000014833	TSR1	80	55.538	Cavia_porcellus
ENSLOCG00000006491	TSR1	89	56.117	ENSCCAG00000028962	TSR1	87	56.061	Cebus_capucinus
ENSLOCG00000006491	TSR1	97	51.677	ENSCATG00000044262	TSR1	99	50.683	Cercocebus_atys
ENSLOCG00000006491	TSR1	98	51.720	ENSCLAG00000005567	TSR1	82	57.824	Chinchilla_lanigera
ENSLOCG00000006491	TSR1	97	51.925	ENSCSAG00000013788	TSR1	99	51.429	Chlorocebus_sabaeus
ENSLOCG00000006491	TSR1	88	58.333	ENSCPBG00000020363	TSR1	98	52.491	Chrysemys_picta_bellii
ENSLOCG00000006491	TSR1	95	49.231	ENSCING00000020658	-	90	49.231	Ciona_intestinalis
ENSLOCG00000006491	TSR1	95	47.917	ENSCSAVG00000001875	-	96	47.917	Ciona_savignyi
ENSLOCG00000006491	TSR1	97	48.944	ENSCANG00000033056	TSR1	99	48.820	Colobus_angolensis_palliatus
ENSLOCG00000006491	TSR1	88	57.377	ENSCGRG00001023942	Tsr1	82	59.016	Cricetulus_griseus_chok1gshd
ENSLOCG00000006491	TSR1	88	54.273	ENSCGRG00000013015	Tsr1	80	61.433	Cricetulus_griseus_crigri
ENSLOCG00000006491	TSR1	98	76.000	ENSCSEG00000013009	tsr1	90	76.000	Cynoglossus_semilaevis
ENSLOCG00000006491	TSR1	99	75.342	ENSCVAG00000000506	tsr1	93	75.342	Cyprinodon_variegatus
ENSLOCG00000006491	TSR1	98	75.000	ENSDARG00000007744	tsr1	90	75.000	Danio_rerio
ENSLOCG00000006491	TSR1	88	58.271	ENSDNOG00000004715	TSR1	97	58.122	Dasypus_novemcinctus
ENSLOCG00000006491	TSR1	95	47.258	ENSDORG00000023234	-	99	47.128	Dipodomys_ordii
ENSLOCG00000006491	TSR1	98	50.983	ENSDORG00000016371	-	99	50.798	Dipodomys_ordii
ENSLOCG00000006491	TSR1	94	43.077	FBgn0037073	Tsr1	87	43.077	Drosophila_melanogaster
ENSLOCG00000006491	TSR1	75	64.590	ENSETEG00000017534	TSR1	70	64.262	Echinops_telfairi
ENSLOCG00000006491	TSR1	88	50.751	ENSEBUG00000013731	TSR1	84	50.751	Eptatretus_burgeri
ENSLOCG00000006491	TSR1	97	58.780	ENSEASG00005009302	TSR1	88	59.165	Equus_asinus_asinus
ENSLOCG00000006491	TSR1	98	52.276	ENSECAG00000009114	TSR1	99	53.137	Equus_caballus
ENSLOCG00000006491	TSR1	99	75.000	ENSELUG00000020984	tsr1	87	75.000	Esox_lucius
ENSLOCG00000006491	TSR1	98	51.292	ENSFCAG00000006313	TSR1	99	51.415	Felis_catus
ENSLOCG00000006491	TSR1	98	60.656	ENSFALG00000006532	TSR1	90	60.209	Ficedula_albicollis
ENSLOCG00000006491	TSR1	98	51.166	ENSFDAG00000006038	TSR1	99	49.880	Fukomys_damarensis
ENSLOCG00000006491	TSR1	99	75.000	ENSFHEG00000003626	tsr1	92	75.000	Fundulus_heteroclitus
ENSLOCG00000006491	TSR1	98	70.667	ENSGMOG00000010336	tsr1	90	70.667	Gadus_morhua
ENSLOCG00000006491	TSR1	99	76.316	ENSGAFG00000012993	tsr1	90	76.316	Gambusia_affinis
ENSLOCG00000006491	TSR1	99	55.795	ENSGACG00000010843	tsr1	100	55.436	Gasterosteus_aculeatus
ENSLOCG00000006491	TSR1	89	58.504	ENSGAGG00000025619	-	100	53.106	Gopherus_agassizii
ENSLOCG00000006491	TSR1	97	51.737	ENSGGOG00000001704	TSR1	98	52.179	Gorilla_gorilla
ENSLOCG00000006491	TSR1	99	56.615	ENSHBUG00000017904	tsr1	99	56.527	Haplochromis_burtoni
ENSLOCG00000006491	TSR1	88	58.569	ENSHGLG00000012806	-	82	58.420	Heterocephalus_glaber_female
ENSLOCG00000006491	TSR1	88	51.493	ENSHGLG00000015688	-	83	51.493	Heterocephalus_glaber_female
ENSLOCG00000006491	TSR1	88	58.569	ENSHGLG00100015392	TSR1	82	58.420	Heterocephalus_glaber_male
ENSLOCG00000006491	TSR1	98	72.000	ENSHCOG00000001432	tsr1	90	72.000	Hippocampus_comes
ENSLOCG00000006491	TSR1	98	77.333	ENSIPUG00000004618	tsr1	91	77.333	Ictalurus_punctatus
ENSLOCG00000006491	TSR1	88	57.079	ENSSTOG00000011819	TSR1	82	57.228	Ictidomys_tridecemlineatus
ENSLOCG00000006491	TSR1	84	56.270	ENSJJAG00000019505	Tsr1	83	56.495	Jaculus_jaculus
ENSLOCG00000006491	TSR1	99	56.444	ENSKMAG00000005763	tsr1	99	56.802	Kryptolebias_marmoratus
ENSLOCG00000006491	TSR1	99	80.263	ENSLBEG00000021823	tsr1	91	80.263	Labrus_bergylta
ENSLOCG00000006491	TSR1	99	53.502	ENSLACG00000002197	TSR1	99	54.136	Latimeria_chalumnae
ENSLOCG00000006491	TSR1	97	51.925	ENSMFAG00000021330	TSR1	99	50.932	Macaca_fascicularis
ENSLOCG00000006491	TSR1	97	52.114	ENSMMUG00000017519	TSR1	99	51.119	Macaca_mulatta
ENSLOCG00000006491	TSR1	97	51.677	ENSMNEG00000031382	TSR1	99	51.180	Macaca_nemestrina
ENSLOCG00000006491	TSR1	97	51.553	ENSMLEG00000036733	TSR1	99	50.559	Mandrillus_leucophaeus
ENSLOCG00000006491	TSR1	99	80.263	ENSMAMG00000017918	tsr1	93	80.263	Mastacembelus_armatus
ENSLOCG00000006491	TSR1	99	57.609	ENSMZEG00005007477	tsr1	91	78.667	Maylandia_zebra
ENSLOCG00000006491	TSR1	98	57.504	ENSMGAG00000005576	TSR1	91	57.504	Meleagris_gallopavo
ENSLOCG00000006491	TSR1	97	58.333	ENSMICG00000012943	TSR1	90	58.271	Microcebus_murinus
ENSLOCG00000006491	TSR1	88	56.994	ENSMOCG00000022764	Tsr1	90	57.440	Microtus_ochrogaster
ENSLOCG00000006491	TSR1	99	76.000	ENSMMOG00000014280	tsr1	93	76.000	Mola_mola
ENSLOCG00000006491	TSR1	98	52.211	ENSMODG00000010658	TSR1	99	52.088	Monodelphis_domestica
ENSLOCG00000006491	TSR1	99	78.667	ENSMALG00000011681	tsr1	100	57.109	Monopterus_albus
ENSLOCG00000006491	TSR1	97	58.122	MGP_CAROLIEiJ_G0016727	Tsr1	90	57.079	Mus_caroli
ENSLOCG00000006491	TSR1	97	58.420	ENSMUSG00000038335	Tsr1	90	57.675	Mus_musculus
ENSLOCG00000006491	TSR1	97	58.271	MGP_PahariEiJ_G0017864	Tsr1	90	57.526	Mus_pahari
ENSLOCG00000006491	TSR1	97	58.420	MGP_SPRETEiJ_G0017570	Tsr1	90	57.675	Mus_spretus
ENSLOCG00000006491	TSR1	88	58.296	ENSMPUG00000013000	TSR1	100	58.146	Mustela_putorius_furo
ENSLOCG00000006491	TSR1	97	58.271	ENSMLUG00000003505	TSR1	89	58.788	Myotis_lucifugus
ENSLOCG00000006491	TSR1	99	77.632	ENSNBRG00000020728	tsr1	91	77.632	Neolamprologus_brichardi
ENSLOCG00000006491	TSR1	97	49.437	ENSNLEG00000017184	TSR1	98	49.061	Nomascus_leucogenys
ENSLOCG00000006491	TSR1	92	57.143	ENSMEUG00000015828	TSR1	86	57.143	Notamacropus_eugenii
ENSLOCG00000006491	TSR1	99	56.938	ENSONIG00000013131	tsr1	100	56.886	Oreochromis_niloticus
ENSLOCG00000006491	TSR1	88	55.852	ENSOANG00000008637	TSR1	84	60.638	Ornithorhynchus_anatinus
ENSLOCG00000006491	TSR1	98	52.270	ENSOCUG00000014256	TSR1	98	52.677	Oryctolagus_cuniculus
ENSLOCG00000006491	TSR1	99	81.579	ENSORLG00000004926	tsr1	91	81.579	Oryzias_latipes
ENSLOCG00000006491	TSR1	99	81.579	ENSORLG00020008792	tsr1	91	81.579	Oryzias_latipes_hni
ENSLOCG00000006491	TSR1	99	80.263	ENSORLG00015013838	tsr1	91	80.263	Oryzias_latipes_hsok
ENSLOCG00000006491	TSR1	99	81.579	ENSOMEG00000004830	tsr1	91	81.579	Oryzias_melastigma
ENSLOCG00000006491	TSR1	97	56.701	ENSOGAG00000004492	TSR1	90	56.701	Otolemur_garnettii
ENSLOCG00000006491	TSR1	88	58.036	ENSOARG00000015437	TSR1	80	58.420	Ovis_aries
ENSLOCG00000006491	TSR1	97	52.055	ENSPPAG00000036355	TSR1	89	59.091	Pan_paniscus
ENSLOCG00000006491	TSR1	98	51.046	ENSPPRG00000015519	-	99	50.554	Panthera_pardus
ENSLOCG00000006491	TSR1	98	51.169	ENSPTIG00000010608	TSR1	99	50.677	Panthera_tigris_altaica
ENSLOCG00000006491	TSR1	97	52.055	ENSPTRG00000008547	TSR1	89	59.091	Pan_troglodytes
ENSLOCG00000006491	TSR1	97	49.441	ENSPANG00000024463	TSR1	99	48.447	Papio_anubis
ENSLOCG00000006491	TSR1	98	85.333	ENSPKIG00000013972	tsr1	90	85.333	Paramormyrops_kingsleyae
ENSLOCG00000006491	TSR1	88	57.463	ENSPSIG00000018258	TSR1	94	57.675	Pelodiscus_sinensis
ENSLOCG00000006491	TSR1	99	58.596	ENSPMGG00000011577	tsr1	92	76.000	Periophthalmus_magnuspinnatus
ENSLOCG00000006491	TSR1	97	57.675	ENSPEMG00000018033	Tsr1	90	56.930	Peromyscus_maniculatus_bairdii
ENSLOCG00000006491	TSR1	97	58.990	ENSPCIG00000009357	TSR1	88	58.247	Phascolarctos_cinereus
ENSLOCG00000006491	TSR1	99	74.667	ENSPFOG00000004483	TSR1	90	74.667	Poecilia_formosa
ENSLOCG00000006491	TSR1	99	75.000	ENSPLAG00000022320	tsr1	90	75.000	Poecilia_latipinna
ENSLOCG00000006491	TSR1	99	75.000	ENSPMEG00000004577	tsr1	90	75.000	Poecilia_mexicana
ENSLOCG00000006491	TSR1	95	75.000	ENSPREG00000010354	tsr1	86	75.000	Poecilia_reticulata
ENSLOCG00000006491	TSR1	87	53.172	ENSPPYG00000007792	TSR1	82	52.266	Pongo_abelii
ENSLOCG00000006491	TSR1	97	57.824	ENSPCOG00000017928	TSR1	90	57.675	Propithecus_coquereli
ENSLOCG00000006491	TSR1	98	51.961	ENSPVAG00000002162	TSR1	99	51.961	Pteropus_vampyrus
ENSLOCG00000006491	TSR1	99	56.731	ENSPNYG00000016163	tsr1	99	56.851	Pundamilia_nyererei
ENSLOCG00000006491	TSR1	98	84.211	ENSPNAG00000008659	tsr1	90	84.211	Pygocentrus_nattereri
ENSLOCG00000006491	TSR1	97	57.973	ENSRNOG00000002980	Tsr1	90	57.675	Rattus_norvegicus
ENSLOCG00000006491	TSR1	97	52.422	ENSRBIG00000040016	TSR1	99	51.429	Rhinopithecus_bieti
ENSLOCG00000006491	TSR1	97	52.725	ENSRROG00000030361	TSR1	99	51.711	Rhinopithecus_roxellana
ENSLOCG00000006491	TSR1	96	57.121	ENSSBOG00000020785	TSR1	89	56.818	Saimiri_boliviensis_boliviensis
ENSLOCG00000006491	TSR1	98	52.083	ENSSHAG00000011394	TSR1	99	51.961	Sarcophilus_harrisii
ENSLOCG00000006491	TSR1	99	59.030	ENSSFOG00015005455	tsr1	100	59.058	Scleropages_formosus
ENSLOCG00000006491	TSR1	99	78.667	ENSSMAG00000009504	tsr1	93	78.667	Scophthalmus_maximus
ENSLOCG00000006491	TSR1	99	80.263	ENSSDUG00000012074	tsr1	93	80.263	Seriola_dumerili
ENSLOCG00000006491	TSR1	99	80.263	ENSSLDG00000002031	tsr1	93	80.263	Seriola_lalandi_dorsalis
ENSLOCG00000006491	TSR1	91	49.004	ENSSARG00000000759	TSR1	93	49.004	Sorex_araneus
ENSLOCG00000006491	TSR1	98	58.902	ENSSPUG00000007042	TSR1	90	59.259	Sphenodon_punctatus
ENSLOCG00000006491	TSR1	99	78.667	ENSSPAG00000021951	tsr1	93	78.667	Stegastes_partitus
ENSLOCG00000006491	TSR1	88	59.314	ENSSSCG00000038534	TSR1	82	59.016	Sus_scrofa
ENSLOCG00000006491	TSR1	87	60.909	ENSTGUG00000005883	TSR1	89	61.912	Taeniopygia_guttata
ENSLOCG00000006491	TSR1	99	73.333	ENSTRUG00000004665	tsr1	91	73.333	Takifugu_rubripes
ENSLOCG00000006491	TSR1	98	79.412	ENSTNIG00000016196	tsr1	91	79.412	Tetraodon_nigroviridis
ENSLOCG00000006491	TSR1	69	73.846	ENSTBEG00000015275	-	63	73.846	Tupaia_belangeri
ENSLOCG00000006491	TSR1	98	52.457	ENSTTRG00000001177	TSR1	82	58.867	Tursiops_truncatus
ENSLOCG00000006491	TSR1	88	59.070	ENSUAMG00000025160	TSR1	82	58.471	Ursus_americanus
ENSLOCG00000006491	TSR1	88	58.692	ENSUMAG00000009294	TSR1	83	58.098	Ursus_maritimus
ENSLOCG00000006491	TSR1	80	46.875	ENSVPAG00000000228	TSR1	75	51.963	Vicugna_pacos
ENSLOCG00000006491	TSR1	98	51.538	ENSVVUG00000021767	TSR1	99	51.415	Vulpes_vulpes
ENSLOCG00000006491	TSR1	99	50.916	ENSXETG00000023797	tsr1	99	51.526	Xenopus_tropicalis
ENSLOCG00000006491	TSR1	98	74.667	ENSXCOG00000009635	tsr1	90	74.667	Xiphophorus_couchianus
ENSLOCG00000006491	TSR1	98	75.000	ENSXMAG00000001397	tsr1	88	75.000	Xiphophorus_maculatus