EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLOCG00000006608 (Gene tree)
Gene ID: 102688506
Gene Symbol: tsfm
Alias: zgc:158429
Full Name: Ts translation elongation factor%2C mitochondrial
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 4835 bases
Position: chrLG4:16277036-16281870
Accession: 102688506
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000007985	EF_TS	PF00889.19	1.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000007995	-	963	XM_006629397	ENSLOCP00000007985	305 (aa)	-	W5MHX6

Gene Model

Click here to download ENSLOCG00000006608's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000006608's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000006608	tsfm	89	42.177	ENSG00000123297	TSFM	79	63.964	Homo_sapiens
ENSLOCG00000006608	tsfm	97	48.701	ENSAPOG00000014844	tsfm	98	48.701	Acanthochromis_polyacanthus
ENSLOCG00000006608	tsfm	85	42.308	ENSAMEG00000005452	TSFM	85	42.808	Ailuropoda_melanoleuca
ENSLOCG00000006608	tsfm	97	47.115	ENSACIG00000001066	tsfm	98	46.474	Amphilophus_citrinellus
ENSLOCG00000006608	tsfm	97	47.727	ENSAOCG00000007132	tsfm	98	47.727	Amphiprion_ocellaris
ENSLOCG00000006608	tsfm	97	48.377	ENSAPEG00000015755	tsfm	98	48.377	Amphiprion_percula
ENSLOCG00000006608	tsfm	97	45.192	ENSATEG00000001497	tsfm	98	44.551	Anabas_testudineus
ENSLOCG00000006608	tsfm	89	46.233	ENSACAG00000013044	TSFM	87	45.548	Anolis_carolinensis
ENSLOCG00000006608	tsfm	89	43.051	ENSANAG00000038019	TSFM	80	61.194	Aotus_nancymaae
ENSLOCG00000006608	tsfm	97	47.756	ENSACLG00000000139	tsfm	98	47.115	Astatotilapia_calliptera
ENSLOCG00000006608	tsfm	98	48.089	ENSAMXG00000001713	tsfm	98	47.771	Astyanax_mexicanus
ENSLOCG00000006608	tsfm	86	43.816	ENSBTAG00000016912	TSFM	80	40.952	Bos_taurus
ENSLOCG00000006608	tsfm	85	31.293	WBGene00010094	tsfm-1	91	31.757	Caenorhabditis_elegans
ENSLOCG00000006608	tsfm	89	42.177	ENSCJAG00000006600	TSFM	79	60.448	Callithrix_jacchus
ENSLOCG00000006608	tsfm	85	41.577	ENSCAFG00000000293	-	86	42.105	Canis_familiaris
ENSLOCG00000006608	tsfm	85	41.577	ENSCAFG00020022844	TSFM	67	42.105	Canis_lupus_dingo
ENSLOCG00000006608	tsfm	86	44.170	ENSCHIG00000013850	TSFM	92	42.763	Capra_hircus
ENSLOCG00000006608	tsfm	73	39.344	ENSTSYG00000028892	TSFM	92	38.168	Carlito_syrichta
ENSLOCG00000006608	tsfm	60	32.973	ENSCAPG00000007733	-	97	34.031	Cavia_aperea
ENSLOCG00000006608	tsfm	90	41.892	ENSCPOG00000037732	TSFM	90	42.053	Cavia_porcellus
ENSLOCG00000006608	tsfm	89	42.321	ENSCCAG00000033254	TSFM	80	60.902	Cebus_capucinus
ENSLOCG00000006608	tsfm	89	43.197	ENSCATG00000016867	TSFM	80	62.687	Cercocebus_atys
ENSLOCG00000006608	tsfm	85	41.429	ENSCLAG00000009226	TSFM	85	41.297	Chinchilla_lanigera
ENSLOCG00000006608	tsfm	89	43.197	ENSCSAG00000004601	TSFM	90	43.333	Chlorocebus_sabaeus
ENSLOCG00000006608	tsfm	61	61.654	ENSCHOG00000002360	TSFM	74	61.654	Choloepus_hoffmanni
ENSLOCG00000006608	tsfm	96	45.283	ENSCPBG00000018147	TSFM	92	44.654	Chrysemys_picta_bellii
ENSLOCG00000006608	tsfm	80	39.015	ENSCANG00000030298	TSFM	92	39.259	Colobus_angolensis_palliatus
ENSLOCG00000006608	tsfm	90	45.638	ENSCGRG00001023000	TSFM	90	44.518	Cricetulus_griseus_chok1gshd
ENSLOCG00000006608	tsfm	90	45.638	ENSCGRG00000006566	TSFM	90	44.518	Cricetulus_griseus_crigri
ENSLOCG00000006608	tsfm	76	44.000	ENSCSEG00000003376	tsfm	84	45.082	Cynoglossus_semilaevis
ENSLOCG00000006608	tsfm	96	47.039	ENSCVAG00000001340	tsfm	98	47.039	Cyprinodon_variegatus
ENSLOCG00000006608	tsfm	96	47.213	ENSDARG00000060748	tsfm	98	46.885	Danio_rerio
ENSLOCG00000006608	tsfm	89	42.662	ENSDNOG00000049415	TSFM	90	42.475	Dasypus_novemcinctus
ENSLOCG00000006608	tsfm	76	39.535	ENSDORG00000007272	Tsfm	92	39.535	Dipodomys_ordii
ENSLOCG00000006608	tsfm	86	38.095	FBgn0032646	mEFTs	86	37.729	Drosophila_melanogaster
ENSLOCG00000006608	tsfm	88	43.448	ENSETEG00000002686	-	88	42.517	Echinops_telfairi
ENSLOCG00000006608	tsfm	89	42.857	ENSEASG00005007292	TSFM	71	42.333	Equus_asinus_asinus
ENSLOCG00000006608	tsfm	89	42.857	ENSECAG00000010520	TSFM	79	42.333	Equus_caballus
ENSLOCG00000006608	tsfm	97	48.397	ENSELUG00000015481	tsfm	98	47.756	Esox_lucius
ENSLOCG00000006608	tsfm	90	42.712	ENSFCAG00000023794	TSFM	80	59.701	Felis_catus
ENSLOCG00000006608	tsfm	91	41.935	ENSFDAG00000016548	TSFM	90	41.935	Fukomys_damarensis
ENSLOCG00000006608	tsfm	97	47.573	ENSFHEG00000013458	tsfm	98	47.557	Fundulus_heteroclitus
ENSLOCG00000006608	tsfm	90	48.421	ENSGMOG00000000868	tsfm	97	48.421	Gadus_morhua
ENSLOCG00000006608	tsfm	97	47.557	ENSGAFG00000021764	tsfm	98	47.883	Gambusia_affinis
ENSLOCG00000006608	tsfm	93	46.154	ENSGACG00000000697	tsfm	94	46.284	Gasterosteus_aculeatus
ENSLOCG00000006608	tsfm	90	46.309	ENSGAGG00000020897	TSFM	86	45.302	Gopherus_agassizii
ENSLOCG00000006608	tsfm	89	42.517	ENSGGOG00000001415	TSFM	80	60.448	Gorilla_gorilla
ENSLOCG00000006608	tsfm	97	47.115	ENSHBUG00000021738	tsfm	98	46.474	Haplochromis_burtoni
ENSLOCG00000006608	tsfm	91	43.144	ENSHGLG00000008559	TSFM	89	43.000	Heterocephalus_glaber_female
ENSLOCG00000006608	tsfm	91	43.144	ENSHGLG00100005643	TSFM	89	43.000	Heterocephalus_glaber_male
ENSLOCG00000006608	tsfm	97	46.926	ENSHCOG00000021049	tsfm	98	46.602	Hippocampus_comes
ENSLOCG00000006608	tsfm	89	37.545	ENSIPUG00000019836	tsfm	81	37.545	Ictalurus_punctatus
ENSLOCG00000006608	tsfm	85	43.728	ENSSTOG00000001159	TSFM	89	42.282	Ictidomys_tridecemlineatus
ENSLOCG00000006608	tsfm	90	42.517	ENSJJAG00000012907	Tsfm	88	42.177	Jaculus_jaculus
ENSLOCG00000006608	tsfm	97	45.016	ENSKMAG00000018906	tsfm	98	44.695	Kryptolebias_marmoratus
ENSLOCG00000006608	tsfm	97	49.515	ENSLBEG00000019779	tsfm	98	49.515	Labrus_bergylta
ENSLOCG00000006608	tsfm	94	46.667	ENSLACG00000018125	TSFM	93	46.032	Latimeria_chalumnae
ENSLOCG00000006608	tsfm	91	43.000	ENSLAFG00000015177	TSFM	90	42.000	Loxodonta_africana
ENSLOCG00000006608	tsfm	89	43.197	ENSMFAG00000036132	TSFM	80	62.687	Macaca_fascicularis
ENSLOCG00000006608	tsfm	89	43.197	ENSMMUG00000005893	TSFM	80	62.687	Macaca_mulatta
ENSLOCG00000006608	tsfm	89	43.197	ENSMNEG00000026351	TSFM	80	62.687	Macaca_nemestrina
ENSLOCG00000006608	tsfm	89	43.197	ENSMLEG00000029811	TSFM	80	62.687	Mandrillus_leucophaeus
ENSLOCG00000006608	tsfm	97	47.267	ENSMAMG00000002230	tsfm	98	46.945	Mastacembelus_armatus
ENSLOCG00000006608	tsfm	97	47.436	ENSMZEG00005008170	tsfm	98	46.795	Maylandia_zebra
ENSLOCG00000006608	tsfm	91	45.151	ENSMAUG00000011705	Tsfm	90	44.000	Mesocricetus_auratus
ENSLOCG00000006608	tsfm	84	43.116	ENSMICG00000003812	TSFM	93	55.128	Microcebus_murinus
ENSLOCG00000006608	tsfm	90	44.257	ENSMOCG00000006104	Tsfm	90	43.836	Microtus_ochrogaster
ENSLOCG00000006608	tsfm	97	48.534	ENSMMOG00000021854	tsfm	98	48.534	Mola_mola
ENSLOCG00000006608	tsfm	98	39.441	ENSMODG00000021351	TSFM	95	39.130	Monodelphis_domestica
ENSLOCG00000006608	tsfm	97	47.588	ENSMALG00000015046	tsfm	98	47.588	Monopterus_albus
ENSLOCG00000006608	tsfm	91	44.631	MGP_CAROLIEiJ_G0015873	Tsfm	90	43.624	Mus_caroli
ENSLOCG00000006608	tsfm	91	44.702	ENSMUSG00000040521	Tsfm	90	43.709	Mus_musculus
ENSLOCG00000006608	tsfm	91	44.702	MGP_PahariEiJ_G0031212	Tsfm	90	43.709	Mus_pahari
ENSLOCG00000006608	tsfm	91	44.966	MGP_SPRETEiJ_G0016699	Tsfm	90	43.960	Mus_spretus
ENSLOCG00000006608	tsfm	89	42.053	ENSMPUG00000002051	TSFM	90	42.532	Mustela_putorius_furo
ENSLOCG00000006608	tsfm	85	44.286	ENSMLUG00000005940	TSFM	89	44.295	Myotis_lucifugus
ENSLOCG00000006608	tsfm	86	43.772	ENSNGAG00000014356	Tsfm	84	43.299	Nannospalax_galili
ENSLOCG00000006608	tsfm	97	47.115	ENSNBRG00000016413	tsfm	98	46.474	Neolamprologus_brichardi
ENSLOCG00000006608	tsfm	89	43.197	ENSNLEG00000017178	TSFM	80	61.940	Nomascus_leucogenys
ENSLOCG00000006608	tsfm	90	40.063	ENSOPRG00000006670	TSFM	90	40.127	Ochotona_princeps
ENSLOCG00000006608	tsfm	90	42.951	ENSODEG00000001882	TSFM	90	43.182	Octodon_degus
ENSLOCG00000006608	tsfm	98	45.426	ENSONIG00000019100	tsfm	98	44.479	Oreochromis_niloticus
ENSLOCG00000006608	tsfm	85	40.273	ENSOCUG00000012512	TSFM	69	40.273	Oryctolagus_cuniculus
ENSLOCG00000006608	tsfm	95	47.039	ENSORLG00000030201	tsfm	95	47.039	Oryzias_latipes
ENSLOCG00000006608	tsfm	92	47.797	ENSORLG00020004740	tsfm	95	46.711	Oryzias_latipes_hni
ENSLOCG00000006608	tsfm	90	47.586	ENSORLG00015022703	tsfm	95	45.928	Oryzias_latipes_hsok
ENSLOCG00000006608	tsfm	90	49.826	ENSOMEG00000008934	tsfm	90	49.477	Oryzias_melastigma
ENSLOCG00000006608	tsfm	87	43.007	ENSOGAG00000012235	TSFM	85	42.662	Otolemur_garnettii
ENSLOCG00000006608	tsfm	86	44.170	ENSOARG00000005095	TSFM	90	41.401	Ovis_aries
ENSLOCG00000006608	tsfm	89	42.857	ENSPPAG00000043428	TSFM	80	60.448	Pan_paniscus
ENSLOCG00000006608	tsfm	90	42.712	ENSPPRG00000009667	TSFM	80	59.701	Panthera_pardus
ENSLOCG00000006608	tsfm	90	42.373	ENSPTIG00000015290	TSFM	80	58.955	Panthera_tigris_altaica
ENSLOCG00000006608	tsfm	89	42.857	ENSPTRG00000005152	TSFM	80	60.448	Pan_troglodytes
ENSLOCG00000006608	tsfm	89	43.197	ENSPANG00000007866	TSFM	80	62.687	Papio_anubis
ENSLOCG00000006608	tsfm	99	47.267	ENSPKIG00000008495	tsfm	96	47.267	Paramormyrops_kingsleyae
ENSLOCG00000006608	tsfm	62	36.493	ENSPSIG00000015776	TSFM	93	35.545	Pelodiscus_sinensis
ENSLOCG00000006608	tsfm	94	48.026	ENSPMGG00000007022	tsfm	98	47.403	Periophthalmus_magnuspinnatus
ENSLOCG00000006608	tsfm	90	46.284	ENSPEMG00000000414	Tsfm	90	46.823	Peromyscus_maniculatus_bairdii
ENSLOCG00000006608	tsfm	90	42.373	ENSPCIG00000023619	TSFM	90	42.034	Phascolarctos_cinereus
ENSLOCG00000006608	tsfm	97	47.896	ENSPFOG00000010782	tsfm	98	47.883	Poecilia_formosa
ENSLOCG00000006608	tsfm	97	48.220	ENSPLAG00000008105	tsfm	98	48.544	Poecilia_latipinna
ENSLOCG00000006608	tsfm	97	47.573	ENSPMEG00000002567	tsfm	98	47.557	Poecilia_mexicana
ENSLOCG00000006608	tsfm	97	47.249	ENSPREG00000016696	tsfm	98	47.231	Poecilia_reticulata
ENSLOCG00000006608	tsfm	89	42.857	ENSPPYG00000004708	TSFM	76	43.000	Pongo_abelii
ENSLOCG00000006608	tsfm	90	42.345	ENSPCAG00000003789	TSFM	89	42.208	Procavia_capensis
ENSLOCG00000006608	tsfm	88	42.955	ENSPCOG00000021606	TSFM	80	60.902	Propithecus_coquereli
ENSLOCG00000006608	tsfm	89	44.068	ENSPVAG00000012141	TSFM	90	42.857	Pteropus_vampyrus
ENSLOCG00000006608	tsfm	97	47.436	ENSPNYG00000001230	tsfm	98	46.795	Pundamilia_nyererei
ENSLOCG00000006608	tsfm	97	45.455	ENSPNAG00000003241	tsfm	98	45.141	Pygocentrus_nattereri
ENSLOCG00000006608	tsfm	89	41.053	ENSRNOG00000048843	Tsfm	88	40.647	Rattus_norvegicus
ENSLOCG00000006608	tsfm	89	43.197	ENSRBIG00000037278	TSFM	80	62.687	Rhinopithecus_bieti
ENSLOCG00000006608	tsfm	89	43.197	ENSRROG00000031769	TSFM	80	62.687	Rhinopithecus_roxellana
ENSLOCG00000006608	tsfm	89	36.462	ENSSBOG00000021465	TSFM	89	36.364	Saimiri_boliviensis_boliviensis
ENSLOCG00000006608	tsfm	86	44.681	ENSSHAG00000009664	TSFM	80	43.463	Sarcophilus_harrisii
ENSLOCG00000006608	tsfm	96	48.232	ENSSFOG00015014457	tsfm	96	47.896	Scleropages_formosus
ENSLOCG00000006608	tsfm	97	46.624	ENSSMAG00000002467	tsfm	98	45.806	Scophthalmus_maximus
ENSLOCG00000006608	tsfm	97	49.511	ENSSDUG00000006833	tsfm	98	49.511	Seriola_dumerili
ENSLOCG00000006608	tsfm	97	49.675	ENSSLDG00000000715	tsfm	98	49.675	Seriola_lalandi_dorsalis
ENSLOCG00000006608	tsfm	84	45.487	ENSSPUG00000006435	TSFM	97	44.765	Sphenodon_punctatus
ENSLOCG00000006608	tsfm	97	47.742	ENSSPAG00000002548	tsfm	98	47.742	Stegastes_partitus
ENSLOCG00000006608	tsfm	90	44.407	ENSSSCG00000037767	TSFM	76	43.813	Sus_scrofa
ENSLOCG00000006608	tsfm	92	48.148	ENSTRUG00000003081	tsfm	94	48.485	Takifugu_rubripes
ENSLOCG00000006608	tsfm	92	48.822	ENSTNIG00000014578	tsfm	94	48.822	Tetraodon_nigroviridis
ENSLOCG00000006608	tsfm	68	55.844	ENSTBEG00000011603	TSFM	62	55.844	Tupaia_belangeri
ENSLOCG00000006608	tsfm	91	44.186	ENSTTRG00000008351	TSFM	89	42.532	Tursiops_truncatus
ENSLOCG00000006608	tsfm	85	41.958	ENSUAMG00000013142	TSFM	85	42.466	Ursus_americanus
ENSLOCG00000006608	tsfm	85	41.958	ENSUMAG00000020123	TSFM	85	42.466	Ursus_maritimus
ENSLOCG00000006608	tsfm	84	40.433	ENSVVUG00000016735	TSFM	88	40.989	Vulpes_vulpes
ENSLOCG00000006608	tsfm	91	47.119	ENSXETG00000009653	tsfm	98	46.897	Xenopus_tropicalis
ENSLOCG00000006608	tsfm	97	47.249	ENSXMAG00000018468	tsfm	98	47.231	Xiphophorus_maculatus