EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLOCG00000006692 (Gene tree)
Gene ID: 102692059
Gene Symbol: sub1b
Alias: rpo2tc1|sub1|zgc:92831
Full Name: activated RNA polymerase II transcriptional coactivator p15-like
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 21426 bases
Position: chrLG2:17472928-17494353
Accession: 102692059
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000008079	PC4	PF02229.16	1.3e-25	1	1
ENSLOCP00000008099	PC4	PF02229.16	1.8e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000008109	-	1401	XM_006626735	ENSLOCP00000008099	143 (aa)	XP_006626798	W5MI90
ENSLOCT00000008089	-	1348	-	ENSLOCP00000008079	125 (aa)	XP_006626799	W5MI70

Gene Model

Click here to download ENSLOCG00000006692's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000006692's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000006692	sub1b	100	73.228	ENSG00000113387	SUB1	100	77.165	Homo_sapiens
ENSLOCG00000006692	sub1b	100	80.000	ENSAPOG00000005917	SUB1	100	80.000	Acanthochromis_polyacanthus
ENSLOCG00000006692	sub1b	100	74.016	ENSAMEG00000006238	SUB1	98	77.099	Ailuropoda_melanoleuca
ENSLOCG00000006692	sub1b	100	83.200	ENSACIG00000015976	sub1b	100	83.200	Amphilophus_citrinellus
ENSLOCG00000006692	sub1b	85	74.528	ENSAOCG00000002323	-	86	72.642	Amphiprion_ocellaris
ENSLOCG00000006692	sub1b	96	73.333	ENSAOCG00000007313	-	83	81.373	Amphiprion_ocellaris
ENSLOCG00000006692	sub1b	87	72.072	ENSAPEG00000017151	-	71	80.220	Amphiprion_percula
ENSLOCG00000006692	sub1b	100	81.600	ENSAPEG00000024347	sub1b	100	81.600	Amphiprion_percula
ENSLOCG00000006692	sub1b	52	78.462	ENSAPEG00000014618	-	62	78.462	Amphiprion_percula
ENSLOCG00000006692	sub1b	100	84.800	ENSATEG00000010340	sub1b	100	84.800	Anabas_testudineus
ENSLOCG00000006692	sub1b	100	68.421	ENSACAG00000007974	SUB1	100	71.429	Anolis_carolinensis
ENSLOCG00000006692	sub1b	100	73.810	ENSANAG00000023392	-	83	76.190	Aotus_nancymaae
ENSLOCG00000006692	sub1b	100	73.228	ENSANAG00000011651	-	100	77.165	Aotus_nancymaae
ENSLOCG00000006692	sub1b	100	83.200	ENSACLG00000016875	sub1b	64	83.333	Astatotilapia_calliptera
ENSLOCG00000006692	sub1b	100	75.397	ENSAMXG00000037104	sub1b	100	75.397	Astyanax_mexicanus
ENSLOCG00000006692	sub1b	100	73.228	ENSBTAG00000021965	SUB1	100	77.165	Bos_taurus
ENSLOCG00000006692	sub1b	51	50.000	WBGene00011743	T13F2.2	53	50.000	Caenorhabditis_elegans
ENSLOCG00000006692	sub1b	80	72.549	ENSCJAG00000018718	SUB1	98	77.451	Callithrix_jacchus
ENSLOCG00000006692	sub1b	100	72.222	ENSCAFG00000024488	-	100	69.600	Canis_familiaris
ENSLOCG00000006692	sub1b	100	74.016	ENSCAFG00000018879	-	100	72.222	Canis_familiaris
ENSLOCG00000006692	sub1b	100	73.228	ENSCAFG00000016713	-	96	77.165	Canis_familiaris
ENSLOCG00000006692	sub1b	100	74.016	ENSCAFG00020016840	-	100	77.953	Canis_lupus_dingo
ENSLOCG00000006692	sub1b	100	71.875	ENSCAFG00020011479	-	77	76.562	Canis_lupus_dingo
ENSLOCG00000006692	sub1b	100	73.228	ENSCHIG00000008460	SUB1	100	77.165	Capra_hircus
ENSLOCG00000006692	sub1b	100	73.228	ENSTSYG00000029948	-	100	77.165	Carlito_syrichta
ENSLOCG00000006692	sub1b	100	66.923	ENSTSYG00000014069	-	100	67.857	Carlito_syrichta
ENSLOCG00000006692	sub1b	100	63.780	ENSTSYG00000035366	-	83	67.717	Carlito_syrichta
ENSLOCG00000006692	sub1b	100	73.228	ENSCPOG00000031334	SUB1	100	77.165	Cavia_porcellus
ENSLOCG00000006692	sub1b	100	70.079	ENSCCAG00000020604	-	100	70.866	Cebus_capucinus
ENSLOCG00000006692	sub1b	100	73.228	ENSCCAG00000023605	-	100	77.165	Cebus_capucinus
ENSLOCG00000006692	sub1b	100	70.866	ENSCCAG00000033751	-	95	74.803	Cebus_capucinus
ENSLOCG00000006692	sub1b	100	65.079	ENSCCAG00000017043	-	93	69.048	Cebus_capucinus
ENSLOCG00000006692	sub1b	100	73.228	ENSCATG00000031199	SUB1	100	77.165	Cercocebus_atys
ENSLOCG00000006692	sub1b	100	71.875	ENSCLAG00000007522	SUB1	100	75.000	Chinchilla_lanigera
ENSLOCG00000006692	sub1b	100	71.654	ENSCSAG00000019449	-	100	74.803	Chlorocebus_sabaeus
ENSLOCG00000006692	sub1b	100	73.228	ENSCSAG00000017172	-	100	77.165	Chlorocebus_sabaeus
ENSLOCG00000006692	sub1b	100	76.984	ENSCPBG00000024218	SUB1	79	77.778	Chrysemys_picta_bellii
ENSLOCG00000006692	sub1b	100	73.228	ENSCANG00000029372	SUB1	100	77.165	Colobus_angolensis_palliatus
ENSLOCG00000006692	sub1b	100	61.111	ENSCANG00000028665	-	90	63.492	Colobus_angolensis_palliatus
ENSLOCG00000006692	sub1b	100	59.055	ENSCGRG00001016254	-	100	60.317	Cricetulus_griseus_chok1gshd
ENSLOCG00000006692	sub1b	100	63.780	ENSCGRG00001014660	-	100	64.567	Cricetulus_griseus_chok1gshd
ENSLOCG00000006692	sub1b	100	73.228	ENSCGRG00001003473	-	100	76.378	Cricetulus_griseus_chok1gshd
ENSLOCG00000006692	sub1b	100	63.780	ENSCGRG00000019368	-	100	64.567	Cricetulus_griseus_crigri
ENSLOCG00000006692	sub1b	100	73.228	ENSCGRG00000001133	-	100	76.378	Cricetulus_griseus_crigri
ENSLOCG00000006692	sub1b	100	61.417	ENSCGRG00000001489	-	100	61.905	Cricetulus_griseus_crigri
ENSLOCG00000006692	sub1b	99	82.258	ENSDARG00000053446	sub1a	100	84.800	Danio_rerio
ENSLOCG00000006692	sub1b	99	76.613	ENSDARG00000007720	sub1b	99	76.613	Danio_rerio
ENSLOCG00000006692	sub1b	100	71.654	ENSDNOG00000040794	-	100	75.591	Dasypus_novemcinctus
ENSLOCG00000006692	sub1b	100	70.866	ENSDNOG00000032396	-	100	74.803	Dasypus_novemcinctus
ENSLOCG00000006692	sub1b	100	74.016	ENSDORG00000013916	Sub1	100	77.165	Dipodomys_ordii
ENSLOCG00000006692	sub1b	90	45.890	ENSEBUG00000008746	sub1a	78	46.853	Eptatretus_burgeri
ENSLOCG00000006692	sub1b	100	73.228	ENSEASG00005007099	SUB1	100	77.165	Equus_asinus_asinus
ENSLOCG00000006692	sub1b	100	73.228	ENSECAG00000012399	SUB1	100	77.165	Equus_caballus
ENSLOCG00000006692	sub1b	80	77.228	ENSEEUG00000000436	SUB1	99	77.228	Erinaceus_europaeus
ENSLOCG00000006692	sub1b	100	74.016	ENSFCAG00000037288	SUB1	100	77.953	Felis_catus
ENSLOCG00000006692	sub1b	100	76.984	ENSFALG00000002143	SUB1	91	76.515	Ficedula_albicollis
ENSLOCG00000006692	sub1b	100	73.228	ENSFDAG00000017179	SUB1	100	77.165	Fukomys_damarensis
ENSLOCG00000006692	sub1b	100	76.190	ENSGALG00000034905	-	100	76.984	Gallus_gallus
ENSLOCG00000006692	sub1b	100	50.794	ENSGALG00000027147	-	100	51.587	Gallus_gallus
ENSLOCG00000006692	sub1b	100	77.778	ENSGALG00000003248	SUB1	100	78.571	Gallus_gallus
ENSLOCG00000006692	sub1b	100	80.000	ENSGACG00000003912	sub1b	100	80.000	Gasterosteus_aculeatus
ENSLOCG00000006692	sub1b	100	76.984	ENSGAGG00000013535	SUB1	100	77.778	Gopherus_agassizii
ENSLOCG00000006692	sub1b	100	73.228	ENSGGOG00000040900	SUB1	100	77.165	Gorilla_gorilla
ENSLOCG00000006692	sub1b	82	83.495	ENSHBUG00000013953	sub1b	77	83.495	Haplochromis_burtoni
ENSLOCG00000006692	sub1b	100	73.228	ENSHGLG00000006749	SUB1	100	77.165	Heterocephalus_glaber_female
ENSLOCG00000006692	sub1b	100	73.228	ENSHGLG00100014344	SUB1	100	77.165	Heterocephalus_glaber_male
ENSLOCG00000006692	sub1b	100	73.600	ENSHCOG00000001809	sub1b	100	73.600	Hippocampus_comes
ENSLOCG00000006692	sub1b	100	74.400	ENSIPUG00000008166	sub1	100	74.400	Ictalurus_punctatus
ENSLOCG00000006692	sub1b	100	76.562	ENSIPUG00000024367	SUB1	100	76.562	Ictalurus_punctatus
ENSLOCG00000006692	sub1b	100	74.016	ENSSTOG00000019364	SUB1	100	77.953	Ictidomys_tridecemlineatus
ENSLOCG00000006692	sub1b	100	71.654	ENSJJAG00000018885	Sub1	100	75.591	Jaculus_jaculus
ENSLOCG00000006692	sub1b	99	77.419	ENSLBEG00000010728	sub1b	100	76.800	Labrus_bergylta
ENSLOCG00000006692	sub1b	52	84.615	ENSLACG00000001068	SUB1	100	84.615	Latimeria_chalumnae
ENSLOCG00000006692	sub1b	100	74.803	ENSLAFG00000011006	-	100	77.953	Loxodonta_africana
ENSLOCG00000006692	sub1b	100	74.803	ENSLAFG00000032088	-	100	77.953	Loxodonta_africana
ENSLOCG00000006692	sub1b	100	65.354	ENSMFAG00000045643	-	61	68.504	Macaca_fascicularis
ENSLOCG00000006692	sub1b	100	73.228	ENSMFAG00000040728	SUB1	100	77.165	Macaca_fascicularis
ENSLOCG00000006692	sub1b	100	73.228	ENSMMUG00000046181	SUB1	100	77.165	Macaca_mulatta
ENSLOCG00000006692	sub1b	100	73.228	ENSMNEG00000037046	SUB1	100	77.165	Macaca_nemestrina
ENSLOCG00000006692	sub1b	100	73.228	ENSMLEG00000037017	-	100	77.165	Mandrillus_leucophaeus
ENSLOCG00000006692	sub1b	100	71.654	ENSMLEG00000030509	-	94	74.803	Mandrillus_leucophaeus
ENSLOCG00000006692	sub1b	100	59.524	ENSMLEG00000043436	-	90	62.698	Mandrillus_leucophaeus
ENSLOCG00000006692	sub1b	100	80.800	ENSMAMG00000018428	sub1b	100	80.800	Mastacembelus_armatus
ENSLOCG00000006692	sub1b	100	83.200	ENSMZEG00005021252	sub1b	100	83.200	Maylandia_zebra
ENSLOCG00000006692	sub1b	100	53.543	ENSMGAG00000001200	-	52	71.429	Meleagris_gallopavo
ENSLOCG00000006692	sub1b	100	77.778	ENSMGAG00000002906	SUB1	100	78.571	Meleagris_gallopavo
ENSLOCG00000006692	sub1b	100	73.228	ENSMAUG00000020232	Sub1	100	76.378	Mesocricetus_auratus
ENSLOCG00000006692	sub1b	100	73.228	ENSMICG00000014535	SUB1	100	77.165	Microcebus_murinus
ENSLOCG00000006692	sub1b	100	72.441	ENSMOCG00000018930	-	100	75.591	Microtus_ochrogaster
ENSLOCG00000006692	sub1b	100	64.567	ENSMOCG00000016424	-	100	66.929	Microtus_ochrogaster
ENSLOCG00000006692	sub1b	100	68.345	ENSMODG00000020410	SUB1	100	71.942	Monodelphis_domestica
ENSLOCG00000006692	sub1b	100	84.000	ENSMALG00000007163	sub1b	87	79.412	Monopterus_albus
ENSLOCG00000006692	sub1b	100	73.228	MGP_CAROLIEiJ_G0019676	Sub1	100	76.378	Mus_caroli
ENSLOCG00000006692	sub1b	100	74.016	ENSMUSG00000022205	Sub1	100	77.165	Mus_musculus
ENSLOCG00000006692	sub1b	100	72.441	MGP_PahariEiJ_G0016056	Sub1	100	75.591	Mus_pahari
ENSLOCG00000006692	sub1b	100	74.016	MGP_SPRETEiJ_G0020573	Sub1	100	77.165	Mus_spretus
ENSLOCG00000006692	sub1b	100	74.016	ENSMPUG00000015185	-	100	77.953	Mustela_putorius_furo
ENSLOCG00000006692	sub1b	100	73.228	ENSMPUG00000018418	-	100	77.165	Mustela_putorius_furo
ENSLOCG00000006692	sub1b	100	70.079	ENSMLUG00000009236	-	95	70.866	Myotis_lucifugus
ENSLOCG00000006692	sub1b	100	73.228	ENSMLUG00000013685	-	96	76.562	Myotis_lucifugus
ENSLOCG00000006692	sub1b	100	70.635	ENSNGAG00000010782	-	84	73.810	Nannospalax_galili
ENSLOCG00000006692	sub1b	100	64.286	ENSNGAG00000017212	-	100	65.873	Nannospalax_galili
ENSLOCG00000006692	sub1b	100	73.228	ENSNGAG00000014072	-	100	76.378	Nannospalax_galili
ENSLOCG00000006692	sub1b	82	82.524	ENSNBRG00000008451	sub1b	84	82.524	Neolamprologus_brichardi
ENSLOCG00000006692	sub1b	100	72.441	ENSNLEG00000018383	-	100	75.373	Nomascus_leucogenys
ENSLOCG00000006692	sub1b	100	69.841	ENSNLEG00000035968	-	100	73.810	Nomascus_leucogenys
ENSLOCG00000006692	sub1b	100	72.441	ENSNLEG00000036068	SUB1	100	76.378	Nomascus_leucogenys
ENSLOCG00000006692	sub1b	100	75.397	ENSMEUG00000007770	SUB1	100	79.365	Notamacropus_eugenii
ENSLOCG00000006692	sub1b	100	70.866	ENSOPRG00000012887	SUB1	100	75.591	Ochotona_princeps
ENSLOCG00000006692	sub1b	100	73.228	ENSODEG00000001937	-	100	77.165	Octodon_degus
ENSLOCG00000006692	sub1b	100	69.291	ENSODEG00000014558	-	84	73.228	Octodon_degus
ENSLOCG00000006692	sub1b	86	74.074	ENSODEG00000015114	-	87	74.074	Octodon_degus
ENSLOCG00000006692	sub1b	100	76.984	ENSOANG00000002328	SUB1	100	78.947	Ornithorhynchus_anatinus
ENSLOCG00000006692	sub1b	100	72.441	ENSOCUG00000006262	SUB1	69	66.897	Oryctolagus_cuniculus
ENSLOCG00000006692	sub1b	98	74.194	ENSOGAG00000000337	-	100	78.226	Otolemur_garnettii
ENSLOCG00000006692	sub1b	100	73.228	ENSOGAG00000009012	-	100	77.165	Otolemur_garnettii
ENSLOCG00000006692	sub1b	100	73.228	ENSOARG00000012154	SUB1	100	77.165	Ovis_aries
ENSLOCG00000006692	sub1b	100	73.228	ENSPPAG00000011212	SUB1	100	77.165	Pan_paniscus
ENSLOCG00000006692	sub1b	100	74.016	ENSPPRG00000008557	SUB1	100	77.953	Panthera_pardus
ENSLOCG00000006692	sub1b	100	74.016	ENSPTIG00000009466	SUB1	100	77.953	Panthera_tigris_altaica
ENSLOCG00000006692	sub1b	100	69.291	ENSPTRG00000041644	-	100	72.441	Pan_troglodytes
ENSLOCG00000006692	sub1b	100	73.228	ENSPTRG00000048895	SUB1	100	77.165	Pan_troglodytes
ENSLOCG00000006692	sub1b	100	63.492	ENSPANG00000033272	-	90	62.698	Papio_anubis
ENSLOCG00000006692	sub1b	100	72.441	ENSPANG00000000672	-	96	73.134	Papio_anubis
ENSLOCG00000006692	sub1b	100	73.228	ENSPANG00000000339	-	100	76.336	Papio_anubis
ENSLOCG00000006692	sub1b	100	68.504	ENSPANG00000035601	-	100	72.441	Papio_anubis
ENSLOCG00000006692	sub1b	100	73.228	ENSPANG00000002644	-	98	76.336	Papio_anubis
ENSLOCG00000006692	sub1b	100	80.000	ENSPKIG00000016923	sub1b	100	80.000	Paramormyrops_kingsleyae
ENSLOCG00000006692	sub1b	100	76.190	ENSPSIG00000005731	SUB1	95	76.984	Pelodiscus_sinensis
ENSLOCG00000006692	sub1b	100	74.603	ENSPCIG00000020827	-	100	73.810	Phascolarctos_cinereus
ENSLOCG00000006692	sub1b	100	75.397	ENSPCIG00000020907	-	100	79.365	Phascolarctos_cinereus
ENSLOCG00000006692	sub1b	100	73.228	ENSPPYG00000015379	SUB1	100	77.165	Pongo_abelii
ENSLOCG00000006692	sub1b	100	71.654	ENSPPYG00000018347	-	100	75.591	Pongo_abelii
ENSLOCG00000006692	sub1b	100	73.228	ENSPCOG00000014391	SUB1	100	77.165	Propithecus_coquereli
ENSLOCG00000006692	sub1b	100	73.228	ENSPVAG00000004785	SUB1	100	77.165	Pteropus_vampyrus
ENSLOCG00000006692	sub1b	100	83.200	ENSPNYG00000010975	sub1b	100	83.200	Pundamilia_nyererei
ENSLOCG00000006692	sub1b	99	80.645	ENSPNAG00000005998	sub1b	99	80.645	Pygocentrus_nattereri
ENSLOCG00000006692	sub1b	100	78.571	ENSPNAG00000008693	sub1a	100	77.778	Pygocentrus_nattereri
ENSLOCG00000006692	sub1b	100	74.016	ENSRNOG00000050563	Sub1	100	77.165	Rattus_norvegicus
ENSLOCG00000006692	sub1b	100	69.291	ENSRBIG00000031233	SUB1	100	73.228	Rhinopithecus_bieti
ENSLOCG00000006692	sub1b	100	73.228	ENSRROG00000040438	SUB1	100	77.165	Rhinopithecus_roxellana
ENSLOCG00000006692	sub1b	100	67.460	ENSRROG00000042718	-	90	69.841	Rhinopithecus_roxellana
ENSLOCG00000006692	sub1b	100	73.228	ENSSBOG00000026994	SUB1	100	77.165	Saimiri_boliviensis_boliviensis
ENSLOCG00000006692	sub1b	100	75.397	ENSSHAG00000014986	SUB1	100	79.365	Sarcophilus_harrisii
ENSLOCG00000006692	sub1b	100	78.740	ENSSFOG00015018386	sub1b	100	79.528	Scleropages_formosus
ENSLOCG00000006692	sub1b	100	81.600	ENSSFOG00015017283	sub1b	100	81.600	Scleropages_formosus
ENSLOCG00000006692	sub1b	100	80.000	ENSSMAG00000000313	sub1b	100	80.000	Scophthalmus_maximus
ENSLOCG00000006692	sub1b	100	81.600	ENSSDUG00000013854	sub1b	79	79.231	Seriola_dumerili
ENSLOCG00000006692	sub1b	100	81.600	ENSSLDG00000000852	sub1b	100	81.600	Seriola_lalandi_dorsalis
ENSLOCG00000006692	sub1b	100	76.190	ENSSPUG00000016817	SUB1	100	76.984	Sphenodon_punctatus
ENSLOCG00000006692	sub1b	100	82.400	ENSSPAG00000019363	sub1b	100	82.400	Stegastes_partitus
ENSLOCG00000006692	sub1b	100	73.228	ENSSSCG00000040294	-	87	77.165	Sus_scrofa
ENSLOCG00000006692	sub1b	100	73.228	ENSSSCG00000032650	-	100	77.165	Sus_scrofa
ENSLOCG00000006692	sub1b	100	75.397	ENSTGUG00000001918	SUB1	100	76.190	Taeniopygia_guttata
ENSLOCG00000006692	sub1b	100	76.000	ENSTRUG00000024420	sub1b	100	76.000	Takifugu_rubripes
ENSLOCG00000006692	sub1b	100	73.600	ENSTNIG00000002700	sub1b	100	73.600	Tetraodon_nigroviridis
ENSLOCG00000006692	sub1b	99	66.667	ENSTBEG00000015821	-	100	70.635	Tupaia_belangeri
ENSLOCG00000006692	sub1b	100	71.654	ENSTBEG00000001790	-	100	70.866	Tupaia_belangeri
ENSLOCG00000006692	sub1b	100	71.654	ENSTBEG00000004053	-	100	75.591	Tupaia_belangeri
ENSLOCG00000006692	sub1b	100	70.866	ENSTBEG00000011247	-	99	74.803	Tupaia_belangeri
ENSLOCG00000006692	sub1b	100	71.654	ENSTBEG00000006504	-	100	75.591	Tupaia_belangeri
ENSLOCG00000006692	sub1b	100	74.016	ENSTBEG00000012861	-	100	71.654	Tupaia_belangeri
ENSLOCG00000006692	sub1b	81	77.451	ENSTTRG00000017324	SUB1	99	77.451	Tursiops_truncatus
ENSLOCG00000006692	sub1b	100	74.016	ENSUAMG00000000182	SUB1	100	77.953	Ursus_americanus
ENSLOCG00000006692	sub1b	100	74.016	ENSUMAG00000013792	SUB1	100	77.953	Ursus_maritimus
ENSLOCG00000006692	sub1b	100	67.460	ENSVPAG00000011012	SUB1	100	71.429	Vicugna_pacos
ENSLOCG00000006692	sub1b	86	70.909	ENSVVUG00000025193	-	92	75.455	Vulpes_vulpes
ENSLOCG00000006692	sub1b	100	74.016	ENSVVUG00000022166	-	100	77.953	Vulpes_vulpes
ENSLOCG00000006692	sub1b	100	69.531	ENSXETG00000027218	sub1	100	73.438	Xenopus_tropicalis