EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000006727 (Gene tree)
Gene ID: 102692463
Gene Symbol: zfr
Alias: wu:fb25b08
Full Name: zinc finger RNA binding protein
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 39634 bases
Position: chrLG2:17511823-17551456
Accession: 102692463
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000008128	DZF	PF07528.14	1.7e-70	1	1
ENSLOCP00000008128	zf-met	PF12874.7	2.2e-21	1	3
ENSLOCP00000008128	zf-met	PF12874.7	2.2e-21	2	3
ENSLOCP00000008128	zf-met	PF12874.7	2.2e-21	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000008138	-	5699	XM_006626737	ENSLOCP00000008128	1104 (aa)	XP_006626800	W5MIB9

Gene Model

Click here to download ENSLOCG00000006727's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000006727's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000006727	zfr	60	53.088	ENSLOCG00000003939	zfr2	53	59.810

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000006727	zfr	100	79.892	ENSG00000056097	ZFR	100	78.905	Homo_sapiens
ENSLOCG00000006727	zfr	100	77.145	ENSAPOG00000009740	zfr	100	76.513	Acanthochromis_polyacanthus
ENSLOCG00000006727	zfr	100	79.515	ENSAMEG00000006184	ZFR	100	78.616	Ailuropoda_melanoleuca
ENSLOCG00000006727	zfr	93	87.500	ENSACIG00000015926	zfr	100	87.500	Amphilophus_citrinellus
ENSLOCG00000006727	zfr	100	78.791	ENSAOCG00000013876	zfr	100	79.152	Amphiprion_ocellaris
ENSLOCG00000006727	zfr	100	81.859	ENSAPEG00000024383	zfr	100	82.220	Amphiprion_percula
ENSLOCG00000006727	zfr	100	82.896	ENSATEG00000010271	zfr	100	82.534	Anabas_testudineus
ENSLOCG00000006727	zfr	79	75.316	ENSAPLG00000015627	-	100	75.086	Anas_platyrhynchos
ENSLOCG00000006727	zfr	100	78.347	ENSACAG00000007880	ZFR	100	77.338	Anolis_carolinensis
ENSLOCG00000006727	zfr	100	79.892	ENSANAG00000023333	ZFR	100	78.995	Aotus_nancymaae
ENSLOCG00000006727	zfr	93	87.500	ENSACLG00000016832	zfr	100	87.500	Astatotilapia_calliptera
ENSLOCG00000006727	zfr	98	84.317	ENSAMXG00000019511	zfr	100	83.764	Astyanax_mexicanus
ENSLOCG00000006727	zfr	100	79.803	ENSBTAG00000008414	ZFR	98	83.333	Bos_taurus
ENSLOCG00000006727	zfr	100	79.803	ENSCJAG00000018740	ZFR	100	85.859	Callithrix_jacchus
ENSLOCG00000006727	zfr	100	77.778	ENSCAFG00000018886	ZFR	99	78.999	Canis_familiaris
ENSLOCG00000006727	zfr	100	79.515	ENSCAFG00020016859	-	100	85.859	Canis_lupus_dingo
ENSLOCG00000006727	zfr	100	79.892	ENSCHIG00000007710	ZFR	100	78.995	Capra_hircus
ENSLOCG00000006727	zfr	97	79.533	ENSTSYG00000010670	ZFR	99	78.293	Carlito_syrichta
ENSLOCG00000006727	zfr	97	63.824	ENSCAPG00000015655	ZFR	88	61.191	Cavia_aperea
ENSLOCG00000006727	zfr	90	83.102	ENSCPOG00000000862	ZFR	100	72.659	Cavia_porcellus
ENSLOCG00000006727	zfr	100	79.713	ENSCCAG00000024473	ZFR	100	78.815	Cebus_capucinus
ENSLOCG00000006727	zfr	100	79.713	ENSCATG00000038311	ZFR	100	78.815	Cercocebus_atys
ENSLOCG00000006727	zfr	97	79.035	ENSCLAG00000007408	ZFR	100	78.652	Chinchilla_lanigera
ENSLOCG00000006727	zfr	100	79.713	ENSCSAG00000017180	ZFR	100	78.815	Chlorocebus_sabaeus
ENSLOCG00000006727	zfr	90	68.421	ENSCHOG00000003848	ZFR	94	66.205	Choloepus_hoffmanni
ENSLOCG00000006727	zfr	100	80.863	ENSCPBG00000024211	ZFR	100	79.874	Chrysemys_picta_bellii
ENSLOCG00000006727	zfr	100	79.803	ENSCANG00000017807	ZFR	100	78.905	Colobus_angolensis_palliatus
ENSLOCG00000006727	zfr	100	80.251	ENSCGRG00001016009	Zfr	100	79.174	Cricetulus_griseus_chok1gshd
ENSLOCG00000006727	zfr	98	78.972	ENSCGRG00000001228	Zfr	98	78.281	Cricetulus_griseus_crigri
ENSLOCG00000006727	zfr	99	80.000	ENSCSEG00000011169	ZFR	99	79.819	Cynoglossus_semilaevis
ENSLOCG00000006727	zfr	93	81.481	ENSCSEG00000009224	zfr	100	81.775	Cynoglossus_semilaevis
ENSLOCG00000006727	zfr	98	78.651	ENSCVAG00000016494	zfr	100	78.031	Cyprinodon_variegatus
ENSLOCG00000006727	zfr	100	83.604	ENSDARG00000027109	zfr	100	83.063	Danio_rerio
ENSLOCG00000006727	zfr	100	79.570	ENSDNOG00000008852	ZFR	100	79.122	Dasypus_novemcinctus
ENSLOCG00000006727	zfr	100	78.276	ENSDORG00000016643	Zfr	100	78.276	Dipodomys_ordii
ENSLOCG00000006727	zfr	100	75.293	ENSETEG00000008937	ZFR	100	74.211	Echinops_telfairi
ENSLOCG00000006727	zfr	100	79.605	ENSEASG00005007104	ZFR	100	78.706	Equus_asinus_asinus
ENSLOCG00000006727	zfr	82	77.996	ENSECAG00000012851	ZFR	99	77.451	Equus_caballus
ENSLOCG00000006727	zfr	95	70.275	ENSEEUG00000014206	ZFR	87	82.432	Erinaceus_europaeus
ENSLOCG00000006727	zfr	99	73.506	ENSELUG00000022743	zfr	99	71.250	Esox_lucius
ENSLOCG00000006727	zfr	100	79.605	ENSFCAG00000000354	ZFR	100	78.706	Felis_catus
ENSLOCG00000006727	zfr	100	79.656	ENSFALG00000002149	ZFR	100	78.933	Ficedula_albicollis
ENSLOCG00000006727	zfr	99	79.382	ENSFDAG00000012993	ZFR	100	78.383	Fukomys_damarensis
ENSLOCG00000006727	zfr	53	79.117	ENSFHEG00000012064	zfr	92	78.401	Fundulus_heteroclitus
ENSLOCG00000006727	zfr	95	90.541	ENSGMOG00000003967	zfr	94	91.176	Gadus_morhua
ENSLOCG00000006727	zfr	100	80.668	ENSGALG00000034488	-	100	79.584	Gallus_gallus
ENSLOCG00000006727	zfr	100	80.596	ENSGALG00000003235	-	100	79.964	Gallus_gallus
ENSLOCG00000006727	zfr	85	89.922	ENSGAFG00000016229	zfr	100	75.000	Gambusia_affinis
ENSLOCG00000006727	zfr	99	77.252	ENSGACG00000005045	zfr	99	77.030	Gasterosteus_aculeatus
ENSLOCG00000006727	zfr	95	80.171	ENSGAGG00000013544	ZFR	99	79.886	Gopherus_agassizii
ENSLOCG00000006727	zfr	100	79.803	ENSGGOG00000016302	ZFR	100	78.815	Gorilla_gorilla
ENSLOCG00000006727	zfr	100	79.623	ENSHGLG00000008088	ZFR	100	78.636	Heterocephalus_glaber_female
ENSLOCG00000006727	zfr	97	79.050	ENSHGLG00100016776	ZFR	99	78.371	Heterocephalus_glaber_male
ENSLOCG00000006727	zfr	99	80.631	ENSHCOG00000001548	zfr	99	79.279	Hippocampus_comes
ENSLOCG00000006727	zfr	100	84.116	ENSIPUG00000008192	zfr	100	84.025	Ictalurus_punctatus
ENSLOCG00000006727	zfr	100	79.513	ENSSTOG00000008742	ZFR	100	78.700	Ictidomys_tridecemlineatus
ENSLOCG00000006727	zfr	99	74.389	ENSJJAG00000023064	Zfr	98	73.077	Jaculus_jaculus
ENSLOCG00000006727	zfr	92	79.409	ENSKMAG00000009468	zfr	99	80.296	Kryptolebias_marmoratus
ENSLOCG00000006727	zfr	100	79.480	ENSLBEG00000010783	zfr	100	78.853	Labrus_bergylta
ENSLOCG00000006727	zfr	100	77.489	ENSLACG00000000831	ZFR	100	76.613	Latimeria_chalumnae
ENSLOCG00000006727	zfr	98	79.193	ENSLAFG00000002308	ZFR	100	77.635	Loxodonta_africana
ENSLOCG00000006727	zfr	100	78.815	ENSMFAG00000042691	ZFR	100	77.917	Macaca_fascicularis
ENSLOCG00000006727	zfr	100	79.713	ENSMMUG00000001317	ZFR	100	78.815	Macaca_mulatta
ENSLOCG00000006727	zfr	100	79.713	ENSMNEG00000029441	ZFR	100	83.333	Macaca_nemestrina
ENSLOCG00000006727	zfr	100	77.408	ENSMLEG00000028503	ZFR	100	78.525	Mandrillus_leucophaeus
ENSLOCG00000006727	zfr	100	81.785	ENSMAMG00000017351	zfr	100	81.318	Mastacembelus_armatus
ENSLOCG00000006727	zfr	93	87.500	ENSMZEG00005021243	zfr	100	87.500	Maylandia_zebra
ENSLOCG00000006727	zfr	96	68.826	ENSMGAG00000002841	ZFR	71	70.185	Meleagris_gallopavo
ENSLOCG00000006727	zfr	100	80.521	ENSMAUG00000000976	Zfr	100	78.905	Mesocricetus_auratus
ENSLOCG00000006727	zfr	100	79.623	ENSMICG00000001244	ZFR	100	78.725	Microcebus_murinus
ENSLOCG00000006727	zfr	100	80.072	ENSMOCG00000018630	Zfr	100	79.264	Microtus_ochrogaster
ENSLOCG00000006727	zfr	100	77.187	ENSMMOG00000012585	zfr	90	78.630	Mola_mola
ENSLOCG00000006727	zfr	100	80.521	ENSMODG00000020412	ZFR	100	79.713	Monodelphis_domestica
ENSLOCG00000006727	zfr	100	77.145	ENSMALG00000007123	zfr	95	97.015	Monopterus_albus
ENSLOCG00000006727	zfr	100	79.892	MGP_CAROLIEiJ_G0019681	Zfr	100	81.208	Mus_caroli
ENSLOCG00000006727	zfr	100	79.982	ENSMUSG00000022201	Zfr	100	84.239	Mus_musculus
ENSLOCG00000006727	zfr	100	79.892	MGP_PahariEiJ_G0016057	Zfr	100	81.208	Mus_pahari
ENSLOCG00000006727	zfr	100	79.982	MGP_SPRETEiJ_G0020574	Zfr	100	81.208	Mus_spretus
ENSLOCG00000006727	zfr	74	77.697	ENSMPUG00000015193	-	99	77.091	Mustela_putorius_furo
ENSLOCG00000006727	zfr	97	79.626	ENSMLUG00000011797	ZFR	99	78.692	Myotis_lucifugus
ENSLOCG00000006727	zfr	100	79.892	ENSNGAG00000018328	Zfr	100	78.995	Nannospalax_galili
ENSLOCG00000006727	zfr	93	87.500	ENSNBRG00000008378	zfr	100	87.500	Neolamprologus_brichardi
ENSLOCG00000006727	zfr	100	77.117	ENSNLEG00000014098	ZFR	100	78.431	Nomascus_leucogenys
ENSLOCG00000006727	zfr	96	75.070	ENSMEUG00000010225	ZFR	100	73.477	Notamacropus_eugenii
ENSLOCG00000006727	zfr	83	86.800	ENSOPRG00000016756	ZFR	84	83.600	Ochotona_princeps
ENSLOCG00000006727	zfr	96	79.775	ENSODEG00000001990	ZFR	100	78.933	Octodon_degus
ENSLOCG00000006727	zfr	100	63.026	ENSONIG00000013960	zfr	79	82.297	Oreochromis_niloticus
ENSLOCG00000006727	zfr	96	80.823	ENSOANG00000014434	ZFR	99	80.262	Ornithorhynchus_anatinus
ENSLOCG00000006727	zfr	100	79.443	ENSOCUG00000016737	ZFR	100	78.546	Oryctolagus_cuniculus
ENSLOCG00000006727	zfr	99	80.668	ENSORLG00000017243	zfr	99	80.036	Oryzias_latipes
ENSLOCG00000006727	zfr	99	80.849	ENSORLG00020014823	zfr	99	80.217	Oryzias_latipes_hni
ENSLOCG00000006727	zfr	99	80.668	ENSORLG00015005801	zfr	99	80.036	Oryzias_latipes_hsok
ENSLOCG00000006727	zfr	99	81.391	ENSOMEG00000003336	zfr	99	80.957	Oryzias_melastigma
ENSLOCG00000006727	zfr	100	77.668	ENSOGAG00000015117	ZFR	100	76.502	Otolemur_garnettii
ENSLOCG00000006727	zfr	97	78.245	ENSOARG00000012233	ZFR	100	78.058	Ovis_aries
ENSLOCG00000006727	zfr	97	79.439	ENSPPAG00000027447	ZFR	99	78.411	Pan_paniscus
ENSLOCG00000006727	zfr	100	79.605	ENSPPRG00000008253	ZFR	100	78.706	Panthera_pardus
ENSLOCG00000006727	zfr	100	77.089	ENSPTIG00000010038	ZFR	99	76.396	Panthera_tigris_altaica
ENSLOCG00000006727	zfr	100	79.892	ENSPTRG00000016771	ZFR	100	78.905	Pan_troglodytes
ENSLOCG00000006727	zfr	100	78.610	ENSPANG00000003729	ZFR	100	77.708	Papio_anubis
ENSLOCG00000006727	zfr	100	85.081	ENSPKIG00000016781	ZFR	100	86.010	Paramormyrops_kingsleyae
ENSLOCG00000006727	zfr	100	74.464	ENSPKIG00000007596	ZFR	100	73.396	Paramormyrops_kingsleyae
ENSLOCG00000006727	zfr	51	84.670	ENSPSIG00000005779	ZFR	99	83.422	Pelodiscus_sinensis
ENSLOCG00000006727	zfr	94	83.071	ENSPMGG00000015984	zfr	100	82.677	Periophthalmus_magnuspinnatus
ENSLOCG00000006727	zfr	96	78.492	ENSPEMG00000014573	Zfr	98	78.119	Peromyscus_maniculatus_bairdii
ENSLOCG00000006727	zfr	100	80.610	ENSPCIG00000020906	ZFR	100	83.607	Phascolarctos_cinereus
ENSLOCG00000006727	zfr	99	80.162	ENSPFOG00000005931	zfr	100	79.103	Poecilia_formosa
ENSLOCG00000006727	zfr	99	80.380	ENSPREG00000011947	zfr	100	79.298	Poecilia_reticulata
ENSLOCG00000006727	zfr	97	79.178	ENSPPYG00000015378	ZFR	99	78.245	Pongo_abelii
ENSLOCG00000006727	zfr	100	72.801	ENSPCAG00000007277	ZFR	100	71.544	Procavia_capensis
ENSLOCG00000006727	zfr	95	78.942	ENSPCOG00000000045	ZFR	99	78.754	Propithecus_coquereli
ENSLOCG00000006727	zfr	94	86.145	ENSPVAG00000004780	ZFR	100	73.046	Pteropus_vampyrus
ENSLOCG00000006727	zfr	93	87.500	ENSPNYG00000006239	zfr	100	87.500	Pundamilia_nyererei
ENSLOCG00000006727	zfr	100	85.611	ENSPNAG00000025151	zfr	100	91.146	Pygocentrus_nattereri
ENSLOCG00000006727	zfr	100	80.072	ENSRNOG00000011627	Zfr	100	80.620	Rattus_norvegicus
ENSLOCG00000006727	zfr	100	79.713	ENSRBIG00000041561	ZFR	100	78.815	Rhinopithecus_bieti
ENSLOCG00000006727	zfr	100	79.713	ENSRROG00000044008	ZFR	100	78.815	Rhinopithecus_roxellana
ENSLOCG00000006727	zfr	96	79.775	ENSSBOG00000024150	ZFR	99	78.745	Saimiri_boliviensis_boliviensis
ENSLOCG00000006727	zfr	97	80.467	ENSSHAG00000015478	ZFR	100	79.626	Sarcophilus_harrisii
ENSLOCG00000006727	zfr	100	78.047	ENSSFOG00015017300	ZFR	100	77.240	Scleropages_formosus
ENSLOCG00000006727	zfr	100	81.475	ENSSMAG00000000320	zfr	100	81.835	Scophthalmus_maximus
ENSLOCG00000006727	zfr	100	82.278	ENSSDUG00000013882	zfr	100	81.917	Seriola_dumerili
ENSLOCG00000006727	zfr	93	82.156	ENSSLDG00000000762	zfr	100	81.557	Seriola_lalandi_dorsalis
ENSLOCG00000006727	zfr	90	88.341	ENSSARG00000006571	ZFR	93	84.753	Sorex_araneus
ENSLOCG00000006727	zfr	96	81.010	ENSSPUG00000016786	ZFR	100	78.765	Sphenodon_punctatus
ENSLOCG00000006727	zfr	100	83.363	ENSSPAG00000019293	zfr	100	83.273	Stegastes_partitus
ENSLOCG00000006727	zfr	100	79.892	ENSSSCG00000027681	ZFR	100	85.859	Sus_scrofa
ENSLOCG00000006727	zfr	99	80.344	ENSTGUG00000001909	ZFR	100	79.167	Taeniopygia_guttata
ENSLOCG00000006727	zfr	100	81.335	ENSTRUG00000016620	zfr	100	80.776	Takifugu_rubripes
ENSLOCG00000006727	zfr	53	78.974	ENSTNIG00000018856	zfr	96	78.120	Tetraodon_nigroviridis
ENSLOCG00000006727	zfr	88	82.979	ENSTBEG00000017687	ZFR	95	82.979	Tupaia_belangeri
ENSLOCG00000006727	zfr	100	75.562	ENSTTRG00000017321	ZFR	100	74.663	Tursiops_truncatus
ENSLOCG00000006727	zfr	79	77.371	ENSUAMG00000000172	-	99	76.800	Ursus_americanus
ENSLOCG00000006727	zfr	79	77.371	ENSUMAG00000013805	-	99	76.800	Ursus_maritimus
ENSLOCG00000006727	zfr	100	77.179	ENSVPAG00000011011	ZFR	100	76.190	Vicugna_pacos
ENSLOCG00000006727	zfr	100	79.605	ENSVVUG00000022171	-	100	78.706	Vulpes_vulpes
ENSLOCG00000006727	zfr	100	73.442	ENSXETG00000015598	zfr	100	72.637	Xenopus_tropicalis
ENSLOCG00000006727	zfr	99	79.513	ENSXCOG00000009361	zfr	100	78.610	Xiphophorus_couchianus
ENSLOCG00000006727	zfr	99	79.711	ENSXMAG00000013356	zfr	100	78.810	Xiphophorus_maculatus