EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000006773 (Gene tree)
Gene ID: 102694427
Gene Symbol: raver2
Alias: -
Full Name: ribonucleoprotein%2C PTB binding 2
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 30729 bases
Position: chrLG10:10178940-10209668
Accession: 102694427
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000008199	RRM_1	PF00076.22	3.9e-35	1	3
ENSLOCP00000008199	RRM_1	PF00076.22	3.9e-35	2	3
ENSLOCP00000008199	RRM_1	PF00076.22	3.9e-35	3	3
ENSLOCP00000008182	RRM_1	PF00076.22	4.1e-35	1	3
ENSLOCP00000008182	RRM_1	PF00076.22	4.1e-35	2	3
ENSLOCP00000008182	RRM_1	PF00076.22	4.1e-35	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000008192	-	2632	-	ENSLOCP00000008182	858 (aa)	-	W5MIH3
ENSLOCT00000008209	-	2581	XM_006634921	ENSLOCP00000008199	849 (aa)	-	W5MIJ0

Gene Model

Click here to download ENSLOCG00000006773's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000006773's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000006773	raver2	96	41.608	ENSLOCG00000007500	raver1	94	42.601

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000006773	raver2	75	50.155	ENSG00000162437	RAVER2	90	50.157	Homo_sapiens
ENSLOCG00000006773	raver2	58	69.034	ENSAPOG00000002766	raver2	100	58.352	Acanthochromis_polyacanthus
ENSLOCG00000006773	raver2	74	51.115	ENSAMEG00000015178	RAVER2	98	51.115	Ailuropoda_melanoleuca
ENSLOCG00000006773	raver2	71	62.205	ENSATEG00000019679	raver2	95	71.795	Anabas_testudineus
ENSLOCG00000006773	raver2	67	51.220	ENSAPLG00000013160	RAVER2	92	51.394	Anas_platyrhynchos
ENSLOCG00000006773	raver2	78	49.031	ENSACAG00000008443	RAVER2	88	49.096	Anolis_carolinensis
ENSLOCG00000006773	raver2	77	49.319	ENSANAG00000025857	RAVER2	91	49.687	Aotus_nancymaae
ENSLOCG00000006773	raver2	99	58.007	ENSACLG00000001840	raver2	100	57.684	Astatotilapia_calliptera
ENSLOCG00000006773	raver2	99	64.569	ENSAMXG00000010570	raver2	100	65.035	Astyanax_mexicanus
ENSLOCG00000006773	raver2	75	49.767	ENSBTAG00000030686	RAVER2	92	50.980	Bos_taurus
ENSLOCG00000006773	raver2	75	49.224	ENSCJAG00000016724	RAVER2	90	49.214	Callithrix_jacchus
ENSLOCG00000006773	raver2	67	47.443	ENSCAFG00000018617	RAVER2	97	47.443	Canis_familiaris
ENSLOCG00000006773	raver2	75	50.702	ENSCAFG00020018120	RAVER2	89	50.553	Canis_lupus_dingo
ENSLOCG00000006773	raver2	75	50.078	ENSCHIG00000005514	RAVER2	91	50.079	Capra_hircus
ENSLOCG00000006773	raver2	71	49.427	ENSTSYG00000006019	RAVER2	86	49.427	Carlito_syrichta
ENSLOCG00000006773	raver2	61	44.595	ENSCAPG00000013527	RAVER2	99	50.777	Cavia_aperea
ENSLOCG00000006773	raver2	64	48.381	ENSCPOG00000005986	RAVER2	87	49.101	Cavia_porcellus
ENSLOCG00000006773	raver2	75	49.459	ENSCCAG00000029834	RAVER2	90	49.452	Cebus_capucinus
ENSLOCG00000006773	raver2	77	48.939	ENSCATG00000040658	RAVER2	99	51.429	Cercocebus_atys
ENSLOCG00000006773	raver2	71	44.040	ENSCLAG00000006590	RAVER2	97	44.352	Chinchilla_lanigera
ENSLOCG00000006773	raver2	74	49.604	ENSCSAG00000001350	RAVER2	97	49.604	Chlorocebus_sabaeus
ENSLOCG00000006773	raver2	75	47.738	ENSCHOG00000007668	RAVER2	90	47.551	Choloepus_hoffmanni
ENSLOCG00000006773	raver2	78	53.453	ENSCPBG00000001015	RAVER2	85	53.495	Chrysemys_picta_bellii
ENSLOCG00000006773	raver2	75	49.689	ENSCANG00000042311	RAVER2	96	49.686	Colobus_angolensis_palliatus
ENSLOCG00000006773	raver2	72	50.081	ENSCGRG00001011852	Raver2	86	51.003	Cricetulus_griseus_chok1gshd
ENSLOCG00000006773	raver2	75	50.297	ENSCVAG00000002687	raver2	85	71.842	Cyprinodon_variegatus
ENSLOCG00000006773	raver2	100	65.625	ENSDARG00000075034	raver2	98	66.088	Danio_rerio
ENSLOCG00000006773	raver2	75	51.014	ENSDNOG00000012130	RAVER2	90	51.027	Dasypus_novemcinctus
ENSLOCG00000006773	raver2	76	48.523	ENSDORG00000002498	Raver2	86	48.657	Dipodomys_ordii
ENSLOCG00000006773	raver2	64	62.150	ENSETEG00000000706	RAVER2	83	62.621	Echinops_telfairi
ENSLOCG00000006773	raver2	74	50.159	ENSEASG00005008158	RAVER2	97	50.159	Equus_asinus_asinus
ENSLOCG00000006773	raver2	74	50.000	ENSECAG00000022014	RAVER2	97	50.000	Equus_caballus
ENSLOCG00000006773	raver2	52	78.571	ENSELUG00000022384	raver2	97	75.849	Esox_lucius
ENSLOCG00000006773	raver2	71	52.805	ENSFCAG00000022781	RAVER2	86	52.931	Felis_catus
ENSLOCG00000006773	raver2	67	50.607	ENSFALG00000012634	RAVER2	93	51.119	Ficedula_albicollis
ENSLOCG00000006773	raver2	64	48.162	ENSFDAG00000010721	RAVER2	84	48.244	Fukomys_damarensis
ENSLOCG00000006773	raver2	99	56.404	ENSFHEG00000001322	raver2	100	57.079	Fundulus_heteroclitus
ENSLOCG00000006773	raver2	57	75.918	ENSGMOG00000013535	raver2	79	75.918	Gadus_morhua
ENSLOCG00000006773	raver2	76	50.076	ENSGALG00000033759	RAVER2	83	50.000	Gallus_gallus
ENSLOCG00000006773	raver2	99	56.180	ENSGAFG00000008577	raver2	100	56.854	Gambusia_affinis
ENSLOCG00000006773	raver2	72	59.873	ENSGACG00000007122	raver2	99	59.184	Gasterosteus_aculeatus
ENSLOCG00000006773	raver2	76	52.950	ENSGAGG00000018767	RAVER2	95	52.950	Gopherus_agassizii
ENSLOCG00000006773	raver2	75	48.762	ENSGGOG00000016447	RAVER2	94	48.746	Gorilla_gorilla
ENSLOCG00000006773	raver2	99	58.231	ENSHBUG00000022983	raver2	100	58.018	Haplochromis_burtoni
ENSLOCG00000006773	raver2	75	47.132	ENSHGLG00000018409	RAVER2	96	45.619	Heterocephalus_glaber_female
ENSLOCG00000006773	raver2	70	46.600	ENSHGLG00100006640	RAVER2	99	53.525	Heterocephalus_glaber_male
ENSLOCG00000006773	raver2	99	56.081	ENSHCOG00000005933	raver2	100	56.306	Hippocampus_comes
ENSLOCG00000006773	raver2	99	61.647	ENSIPUG00000007082	raver2	100	61.647	Ictalurus_punctatus
ENSLOCG00000006773	raver2	75	49.537	ENSJJAG00000000374	Raver2	94	49.765	Jaculus_jaculus
ENSLOCG00000006773	raver2	77	52.770	ENSKMAG00000011656	raver2	100	52.915	Kryptolebias_marmoratus
ENSLOCG00000006773	raver2	89	46.931	ENSLACG00000005188	RAVER2	100	47.043	Latimeria_chalumnae
ENSLOCG00000006773	raver2	71	49.010	ENSLAFG00000012508	RAVER2	97	49.010	Loxodonta_africana
ENSLOCG00000006773	raver2	75	50.078	ENSMFAG00000031436	RAVER2	92	50.348	Macaca_fascicularis
ENSLOCG00000006773	raver2	75	49.922	ENSMMUG00000018565	RAVER2	99	51.261	Macaca_mulatta
ENSLOCG00000006773	raver2	75	50.078	ENSMNEG00000033127	RAVER2	99	51.429	Macaca_nemestrina
ENSLOCG00000006773	raver2	71	48.440	ENSMLEG00000036310	RAVER2	97	48.440	Mandrillus_leucophaeus
ENSLOCG00000006773	raver2	99	58.119	ENSMZEG00005014386	raver2	100	57.795	Maylandia_zebra
ENSLOCG00000006773	raver2	71	50.906	ENSMGAG00000011806	RAVER2	100	49.759	Meleagris_gallopavo
ENSLOCG00000006773	raver2	76	47.050	ENSMAUG00000004248	Raver2	91	48.195	Mesocricetus_auratus
ENSLOCG00000006773	raver2	78	49.321	ENSMICG00000029259	RAVER2	90	50.237	Microcebus_murinus
ENSLOCG00000006773	raver2	76	46.646	ENSMOCG00000018087	Raver2	91	47.393	Microtus_ochrogaster
ENSLOCG00000006773	raver2	75	51.339	ENSMODG00000001242	RAVER2	88	51.510	Monodelphis_domestica
ENSLOCG00000006773	raver2	99	56.745	ENSMALG00000018093	raver2	97	57.048	Monopterus_albus
ENSLOCG00000006773	raver2	72	49.519	MGP_CAROLIEiJ_G0026202	Raver2	89	59.611	Mus_caroli
ENSLOCG00000006773	raver2	72	49.436	ENSMUSG00000035275	Raver2	89	59.854	Mus_musculus
ENSLOCG00000006773	raver2	72	49.839	MGP_PahariEiJ_G0028539	Raver2	90	59.854	Mus_pahari
ENSLOCG00000006773	raver2	72	49.436	MGP_SPRETEiJ_G0027171	Raver2	89	59.854	Mus_spretus
ENSLOCG00000006773	raver2	74	51.433	ENSMPUG00000000717	RAVER2	97	51.433	Mustela_putorius_furo
ENSLOCG00000006773	raver2	67	51.142	ENSMLUG00000007699	RAVER2	99	51.232	Myotis_lucifugus
ENSLOCG00000006773	raver2	75	50.619	ENSNGAG00000000905	Raver2	91	51.027	Nannospalax_galili
ENSLOCG00000006773	raver2	72	48.867	ENSNLEG00000015145	RAVER2	98	48.867	Nomascus_leucogenys
ENSLOCG00000006773	raver2	55	60.057	ENSMEUG00000012740	RAVER2	55	72.491	Notamacropus_eugenii
ENSLOCG00000006773	raver2	74	44.234	ENSODEG00000005253	RAVER2	98	44.550	Octodon_degus
ENSLOCG00000006773	raver2	72	73.926	ENSONIG00000008808	raver2	98	53.823	Oreochromis_niloticus
ENSLOCG00000006773	raver2	67	51.394	ENSOANG00000008327	-	94	51.394	Ornithorhynchus_anatinus
ENSLOCG00000006773	raver2	71	50.000	ENSOCUG00000006221	RAVER2	90	48.183	Oryctolagus_cuniculus
ENSLOCG00000006773	raver2	99	57.368	ENSORLG00000010073	raver2	100	57.191	Oryzias_latipes
ENSLOCG00000006773	raver2	99	57.079	ENSORLG00020010822	raver2	100	57.238	Oryzias_latipes_hni
ENSLOCG00000006773	raver2	99	57.303	ENSOMEG00000007789	raver2	100	57.525	Oryzias_melastigma
ENSLOCG00000006773	raver2	67	50.436	ENSOGAG00000011157	RAVER2	92	50.524	Otolemur_garnettii
ENSLOCG00000006773	raver2	75	50.702	ENSOARG00000010030	RAVER2	91	50.711	Ovis_aries
ENSLOCG00000006773	raver2	75	49.845	ENSPPAG00000039189	RAVER2	93	50.000	Pan_paniscus
ENSLOCG00000006773	raver2	71	52.805	ENSPPRG00000023350	RAVER2	86	52.931	Panthera_pardus
ENSLOCG00000006773	raver2	67	51.839	ENSPTIG00000009389	RAVER2	81	51.930	Panthera_tigris_altaica
ENSLOCG00000006773	raver2	75	49.224	ENSPTRG00000000824	RAVER2	91	51.000	Pan_troglodytes
ENSLOCG00000006773	raver2	75	49.462	ENSPANG00000003396	RAVER2	89	49.536	Papio_anubis
ENSLOCG00000006773	raver2	99	57.944	ENSPKIG00000019357	raver2	100	57.944	Paramormyrops_kingsleyae
ENSLOCG00000006773	raver2	71	44.578	ENSPSIG00000010074	RAVER2	92	45.891	Pelodiscus_sinensis
ENSLOCG00000006773	raver2	72	49.595	ENSPEMG00000001332	Raver2	86	50.334	Peromyscus_maniculatus_bairdii
ENSLOCG00000006773	raver2	75	52.804	ENSPCIG00000020336	RAVER2	89	53.145	Phascolarctos_cinereus
ENSLOCG00000006773	raver2	100	56.368	ENSPFOG00000009386	raver2	100	57.032	Poecilia_formosa
ENSLOCG00000006773	raver2	99	56.502	ENSPLAG00000005632	raver2	100	57.175	Poecilia_latipinna
ENSLOCG00000006773	raver2	99	56.502	ENSPMEG00000000509	raver2	100	57.175	Poecilia_mexicana
ENSLOCG00000006773	raver2	99	56.390	ENSPREG00000020514	raver2	100	57.063	Poecilia_reticulata
ENSLOCG00000006773	raver2	51	60.619	ENSPCAG00000000017	RAVER2	60	63.107	Procavia_capensis
ENSLOCG00000006773	raver2	75	50.078	ENSPCOG00000028379	RAVER2	90	50.079	Propithecus_coquereli
ENSLOCG00000006773	raver2	71	48.430	ENSPVAG00000007172	RAVER2	97	48.430	Pteropus_vampyrus
ENSLOCG00000006773	raver2	77	62.481	ENSPNAG00000000962	raver2	85	80.377	Pygocentrus_nattereri
ENSLOCG00000006773	raver2	72	49.275	ENSRNOG00000023812	Raver2	86	51.500	Rattus_norvegicus
ENSLOCG00000006773	raver2	61	53.321	ENSRBIG00000044090	RAVER2	81	53.448	Rhinopithecus_bieti
ENSLOCG00000006773	raver2	73	49.679	ENSRROG00000041867	RAVER2	88	49.679	Rhinopithecus_roxellana
ENSLOCG00000006773	raver2	69	50.847	ENSSBOG00000023706	RAVER2	92	50.673	Saimiri_boliviensis_boliviensis
ENSLOCG00000006773	raver2	71	51.396	ENSSHAG00000014568	RAVER2	98	51.396	Sarcophilus_harrisii
ENSLOCG00000006773	raver2	84	57.083	ENSSFOG00015013015	raver2	93	57.043	Scleropages_formosus
ENSLOCG00000006773	raver2	99	56.682	ENSSMAG00000020654	raver2	100	56.904	Scophthalmus_maximus
ENSLOCG00000006773	raver2	99	58.605	ENSSDUG00000013065	raver2	100	58.605	Seriola_dumerili
ENSLOCG00000006773	raver2	96	59.096	ENSSLDG00000002746	raver2	99	59.096	Seriola_lalandi_dorsalis
ENSLOCG00000006773	raver2	71	53.038	ENSSPUG00000016441	RAVER2	88	53.078	Sphenodon_punctatus
ENSLOCG00000006773	raver2	75	50.390	ENSSSCG00000025672	-	91	52.261	Sus_scrofa
ENSLOCG00000006773	raver2	67	52.174	ENSTGUG00000009973	RAVER2	99	52.348	Taeniopygia_guttata
ENSLOCG00000006773	raver2	60	82.857	ENSTRUG00000018541	raver2	89	82.857	Takifugu_rubripes
ENSLOCG00000006773	raver2	68	56.197	ENSTNIG00000018106	raver2	98	56.197	Tetraodon_nigroviridis
ENSLOCG00000006773	raver2	71	47.039	ENSTBEG00000009004	RAVER2	98	47.039	Tupaia_belangeri
ENSLOCG00000006773	raver2	54	62.179	ENSTTRG00000009692	RAVER2	60	73.333	Tursiops_truncatus
ENSLOCG00000006773	raver2	67	50.874	ENSUAMG00000007847	RAVER2	83	50.963	Ursus_americanus
ENSLOCG00000006773	raver2	71	49.094	ENSUMAG00000008489	RAVER2	91	49.094	Ursus_maritimus
ENSLOCG00000006773	raver2	74	50.796	ENSVVUG00000013993	RAVER2	97	50.796	Vulpes_vulpes
ENSLOCG00000006773	raver2	75	47.385	ENSXETG00000020406	raver2	92	47.385	Xenopus_tropicalis
ENSLOCG00000006773	raver2	99	56.390	ENSXMAG00000002206	raver2	100	57.063	Xiphophorus_maculatus