EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLOCG00000006848 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-159f12.2
Alias: -
Full Name: si:dkey-159f12.2
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 2484 bases
Position: chrJH591432.1:227891-230374
Accession: ZDB-GENE-081105-168
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000008278	Ribosomal_S17	PF00366.20	2.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000008288	-	1036	-	ENSLOCP00000008278	110 (aa)	-	W5MIR9

Gene Model

Click here to download ENSLOCG00000006848's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000006848's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000006848	si:dkey-159f12.2	94	66.019	ENSG00000142534	RPS11	59	66.019	Homo_sapiens
ENSLOCG00000006848	si:dkey-159f12.2	92	45.545	ENSCAFG00020001440	-	59	45.545	Canis_lupus_dingo
ENSLOCG00000006848	si:dkey-159f12.2	94	56.311	ENSTSYG00000025859	-	50	56.311	Carlito_syrichta
ENSLOCG00000006848	si:dkey-159f12.2	93	65.686	ENSETEG00000017080	-	59	65.686	Echinops_telfairi
ENSLOCG00000006848	si:dkey-159f12.2	93	63.725	ENSEEUG00000003392	RPS11	61	63.725	Erinaceus_europaeus
ENSLOCG00000006848	si:dkey-159f12.2	99	56.250	ENSFCAG00000024200	-	60	56.250	Felis_catus
ENSLOCG00000006848	si:dkey-159f12.2	90	56.566	ENSJJAG00000003779	-	50	56.566	Jaculus_jaculus
ENSLOCG00000006848	si:dkey-159f12.2	94	64.078	ENSLBEG00000023436	si:dkey-159f12.2	52	64.078	Labrus_bergylta
ENSLOCG00000006848	si:dkey-159f12.2	94	64.078	ENSMFAG00000045798	-	51	64.078	Macaca_fascicularis
ENSLOCG00000006848	si:dkey-159f12.2	94	64.078	ENSMNEG00000021980	-	51	64.078	Macaca_nemestrina
ENSLOCG00000006848	si:dkey-159f12.2	90	58.586	ENSMOCG00000022199	-	52	58.586	Microtus_ochrogaster
ENSLOCG00000006848	si:dkey-159f12.2	94	63.107	ENSMOCG00000018600	-	50	63.107	Microtus_ochrogaster
ENSLOCG00000006848	si:dkey-159f12.2	94	66.019	ENSMUSG00000003429	Rps11	54	66.019	Mus_musculus
ENSLOCG00000006848	si:dkey-159f12.2	94	55.340	ENSODEG00000000728	-	50	55.340	Octodon_degus
ENSLOCG00000006848	si:dkey-159f12.2	94	66.019	ENSOANG00000000829	RPS11	59	66.019	Ornithorhynchus_anatinus
ENSLOCG00000006848	si:dkey-159f12.2	100	45.045	ENSOGAG00000000369	-	50	45.045	Otolemur_garnettii
ENSLOCG00000006848	si:dkey-159f12.2	94	65.049	ENSPANG00000031350	-	51	65.049	Papio_anubis
ENSLOCG00000006848	si:dkey-159f12.2	94	66.019	ENSPPYG00000025860	-	59	66.019	Pongo_abelii
ENSLOCG00000006848	si:dkey-159f12.2	94	66.019	ENSTGUG00000000582	RPS11	63	66.667	Taeniopygia_guttata
ENSLOCG00000006848	si:dkey-159f12.2	94	66.019	ENSUAMG00000008447	RPS11	54	66.019	Ursus_americanus
ENSLOCG00000006848	si:dkey-159f12.2	90	47.475	ENSVVUG00000008982	-	55	47.475	Vulpes_vulpes