EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000007283 (Gene tree)
Gene ID: 102689146
Gene Symbol: sall1b
Alias: cb896|id:ibd5077|sall1|sb:eu809|spa1a|spalt1a
Full Name: spalt like transcription factor 1
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 16471 bases
Position: chrLG23:15028879-15045349
Accession: 102689146
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000008838	zf-C2H2	PF00096.26	7.5e-34	1	6
ENSLOCP00000008838	zf-C2H2	PF00096.26	7.5e-34	2	6
ENSLOCP00000008838	zf-C2H2	PF00096.26	7.5e-34	3	6
ENSLOCP00000008838	zf-C2H2	PF00096.26	7.5e-34	4	6
ENSLOCP00000008838	zf-C2H2	PF00096.26	7.5e-34	5	6
ENSLOCP00000008838	zf-C2H2	PF00096.26	7.5e-34	6	6
ENSLOCP00000008821	zf-C2H2	PF00096.26	1e-33	1	6
ENSLOCP00000008821	zf-C2H2	PF00096.26	1e-33	2	6
ENSLOCP00000008821	zf-C2H2	PF00096.26	1e-33	3	6
ENSLOCP00000008821	zf-C2H2	PF00096.26	1e-33	4	6
ENSLOCP00000008821	zf-C2H2	PF00096.26	1e-33	5	6
ENSLOCP00000008821	zf-C2H2	PF00096.26	1e-33	6	6
ENSLOCP00000008838	zf-met	PF12874.7	3.6e-25	1	5
ENSLOCP00000008838	zf-met	PF12874.7	3.6e-25	2	5
ENSLOCP00000008838	zf-met	PF12874.7	3.6e-25	3	5
ENSLOCP00000008838	zf-met	PF12874.7	3.6e-25	4	5
ENSLOCP00000008838	zf-met	PF12874.7	3.6e-25	5	5
ENSLOCP00000008821	zf-met	PF12874.7	4.7e-25	1	5
ENSLOCP00000008821	zf-met	PF12874.7	4.7e-25	2	5
ENSLOCP00000008821	zf-met	PF12874.7	4.7e-25	3	5
ENSLOCP00000008821	zf-met	PF12874.7	4.7e-25	4	5
ENSLOCP00000008821	zf-met	PF12874.7	4.7e-25	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000008849	-	5896	XM_006641412	ENSLOCP00000008838	1313 (aa)	XP_006641475	W5MKC9
ENSLOCT00000008832	-	6046	-	ENSLOCP00000008821	1363 (aa)	-	W5MKB2

Gene Model

Click here to download ENSLOCG00000007283's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000007283's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000007283	sall1b	59	46.939	ENSLOCG00000014144	-	99	46.939
ENSLOCG00000007283	sall1b	83	73.050	ENSLOCG00000002427	sall4	96	63.462
ENSLOCG00000007283	sall1b	64	53.061	ENSLOCG00000003926	znf236	74	53.061
ENSLOCG00000007283	sall1b	100	47.892	ENSLOCG00000007831	sall3a	100	48.401

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000007283	sall1b	99	73.916	ENSG00000103449	SALL1	100	74.423	Homo_sapiens
ENSLOCG00000007283	sall1b	100	77.903	ENSAPOG00000022764	sall1a	100	77.903	Acanthochromis_polyacanthus
ENSLOCG00000007283	sall1b	99	72.027	ENSAMEG00000006817	SALL1	100	72.496	Ailuropoda_melanoleuca
ENSLOCG00000007283	sall1b	100	76.853	ENSACIG00000004231	sall1a	100	77.231	Amphilophus_citrinellus
ENSLOCG00000007283	sall1b	100	78.146	ENSAOCG00000002800	sall1a	100	78.222	Amphiprion_ocellaris
ENSLOCG00000007283	sall1b	100	77.920	ENSAPEG00000010179	sall1a	100	77.995	Amphiprion_percula
ENSLOCG00000007283	sall1b	99	77.115	ENSATEG00000003006	sall1a	99	77.231	Anabas_testudineus
ENSLOCG00000007283	sall1b	100	75.823	ENSAPLG00000003356	SALL1	100	76.722	Anas_platyrhynchos
ENSLOCG00000007283	sall1b	99	73.474	ENSACAG00000014399	SALL1	97	73.625	Anolis_carolinensis
ENSLOCG00000007283	sall1b	99	73.897	ENSANAG00000027238	SALL1	99	74.420	Aotus_nancymaae
ENSLOCG00000007283	sall1b	100	77.005	ENSACLG00000017148	sall1a	100	77.080	Astatotilapia_calliptera
ENSLOCG00000007283	sall1b	100	78.539	ENSAMXG00000018599	sall1a	100	78.625	Astyanax_mexicanus
ENSLOCG00000007283	sall1b	99	53.378	ENSAMXG00000017702	sall1b	99	53.585	Astyanax_mexicanus
ENSLOCG00000007283	sall1b	99	72.653	ENSBTAG00000008544	SALL1	100	72.971	Bos_taurus
ENSLOCG00000007283	sall1b	99	74.121	ENSCJAG00000001740	SALL1	99	74.570	Callithrix_jacchus
ENSLOCG00000007283	sall1b	99	72.741	ENSCAFG00000009755	SALL1	100	72.985	Canis_familiaris
ENSLOCG00000007283	sall1b	99	72.741	ENSCAFG00020002842	SALL1	100	72.985	Canis_lupus_dingo
ENSLOCG00000007283	sall1b	99	72.571	ENSCHIG00000026074	SALL1	100	72.666	Capra_hircus
ENSLOCG00000007283	sall1b	99	74.495	ENSTSYG00000029464	SALL1	99	74.420	Carlito_syrichta
ENSLOCG00000007283	sall1b	98	73.837	ENSCPOG00000006564	SALL1	99	74.040	Cavia_porcellus
ENSLOCG00000007283	sall1b	99	72.802	ENSCCAG00000001639	SALL1	99	73.178	Cebus_capucinus
ENSLOCG00000007283	sall1b	99	74.495	ENSCATG00000004982	SALL1	99	74.944	Cercocebus_atys
ENSLOCG00000007283	sall1b	99	73.728	ENSCLAG00000006380	SALL1	99	73.472	Chinchilla_lanigera
ENSLOCG00000007283	sall1b	99	73.373	ENSCSAG00000005319	SALL1	100	73.916	Chlorocebus_sabaeus
ENSLOCG00000007283	sall1b	64	72.490	ENSCHOG00000000800	-	69	73.663	Choloepus_hoffmanni
ENSLOCG00000007283	sall1b	100	75.710	ENSCPBG00000015924	SALL1	100	76.009	Chrysemys_picta_bellii
ENSLOCG00000007283	sall1b	99	74.196	ENSCANG00000036664	SALL1	100	74.617	Colobus_angolensis_palliatus
ENSLOCG00000007283	sall1b	99	72.605	ENSCGRG00001023314	-	100	72.741	Cricetulus_griseus_chok1gshd
ENSLOCG00000007283	sall1b	98	72.595	ENSCGRG00000009496	Sall1	100	72.734	Cricetulus_griseus_crigri
ENSLOCG00000007283	sall1b	99	75.019	ENSCSEG00000009349	sall1a	99	75.509	Cynoglossus_semilaevis
ENSLOCG00000007283	sall1b	85	83.871	ENSCVAG00000020513	sall1a	99	83.871	Cyprinodon_variegatus
ENSLOCG00000007283	sall1b	99	49.062	ENSDARG00000075891	sall1b	99	48.394	Danio_rerio
ENSLOCG00000007283	sall1b	100	76.320	ENSDARG00000074319	sall1a	100	76.790	Danio_rerio
ENSLOCG00000007283	sall1b	99	73.842	ENSDNOG00000016413	SALL1	99	74.141	Dasypus_novemcinctus
ENSLOCG00000007283	sall1b	98	73.532	ENSETEG00000015150	SALL1	99	73.579	Echinops_telfairi
ENSLOCG00000007283	sall1b	62	43.438	ENSEBUG00000008798	SALL1	95	36.682	Eptatretus_burgeri
ENSLOCG00000007283	sall1b	60	65.385	ENSEBUG00000011732	SALL1	97	65.385	Eptatretus_burgeri
ENSLOCG00000007283	sall1b	99	73.373	ENSEASG00005014602	SALL1	100	73.692	Equus_asinus_asinus
ENSLOCG00000007283	sall1b	91	71.993	ENSECAG00000011334	SALL1	99	72.323	Equus_caballus
ENSLOCG00000007283	sall1b	98	73.135	ENSEEUG00000002014	SALL1	100	73.430	Erinaceus_europaeus
ENSLOCG00000007283	sall1b	94	88.000	ENSELUG00000006159	sall1a	100	88.000	Esox_lucius
ENSLOCG00000007283	sall1b	100	55.614	ENSELUG00000017774	-	100	55.472	Esox_lucius
ENSLOCG00000007283	sall1b	99	72.015	ENSFCAG00000024654	SALL1	100	72.896	Felis_catus
ENSLOCG00000007283	sall1b	100	76.330	ENSFALG00000000074	SALL1	100	76.629	Ficedula_albicollis
ENSLOCG00000007283	sall1b	69	61.538	ENSFHEG00000008424	-	100	56.134	Fundulus_heteroclitus
ENSLOCG00000007283	sall1b	94	100.000	ENSFHEG00000012579	sall1a	100	100.000	Fundulus_heteroclitus
ENSLOCG00000007283	sall1b	94	88.000	ENSGMOG00000006103	sall1a	100	88.000	Gadus_morhua
ENSLOCG00000007283	sall1b	97	41.740	ENSGMOG00000013383	-	99	42.515	Gadus_morhua
ENSLOCG00000007283	sall1b	100	76.330	ENSGALG00000039238	SALL1	100	76.704	Gallus_gallus
ENSLOCG00000007283	sall1b	100	77.962	ENSGAFG00000009964	sall1a	100	78.038	Gambusia_affinis
ENSLOCG00000007283	sall1b	99	76.021	ENSGACG00000016702	sall1a	99	76.324	Gasterosteus_aculeatus
ENSLOCG00000007283	sall1b	100	75.710	ENSGAGG00000013979	SALL1	100	75.859	Gopherus_agassizii
ENSLOCG00000007283	sall1b	99	74.141	ENSGGOG00000000663	SALL1	99	74.514	Gorilla_gorilla
ENSLOCG00000007283	sall1b	100	77.005	ENSHBUG00000022005	sall1a	100	77.080	Haplochromis_burtoni
ENSLOCG00000007283	sall1b	99	73.448	ENSHGLG00000004288	-	99	73.972	Heterocephalus_glaber_female
ENSLOCG00000007283	sall1b	99	73.448	ENSHGLG00100017496	SALL1	99	73.972	Heterocephalus_glaber_male
ENSLOCG00000007283	sall1b	100	73.598	ENSHCOG00000000974	sall1a	100	73.672	Hippocampus_comes
ENSLOCG00000007283	sall1b	100	76.546	ENSIPUG00000016265	SALL1	100	76.435	Ictalurus_punctatus
ENSLOCG00000007283	sall1b	99	50.898	ENSIPUG00000022928	sall1b	99	50.898	Ictalurus_punctatus
ENSLOCG00000007283	sall1b	99	72.836	ENSSTOG00000020885	SALL1	100	72.910	Ictidomys_tridecemlineatus
ENSLOCG00000007283	sall1b	100	77.475	ENSKMAG00000016681	sall1a	100	77.853	Kryptolebias_marmoratus
ENSLOCG00000007283	sall1b	97	75.426	ENSLBEG00000012207	sall1a	95	75.581	Labrus_bergylta
ENSLOCG00000007283	sall1b	100	74.007	ENSLACG00000003556	SALL1	100	74.307	Latimeria_chalumnae
ENSLOCG00000007283	sall1b	92	40.160	ENSLACG00000014018	-	93	40.714	Latimeria_chalumnae
ENSLOCG00000007283	sall1b	98	73.628	ENSLAFG00000015251	SALL1	99	73.983	Loxodonta_africana
ENSLOCG00000007283	sall1b	99	74.420	ENSMFAG00000003298	SALL1	99	74.794	Macaca_fascicularis
ENSLOCG00000007283	sall1b	93	74.194	ENSMMUG00000017200	SALL1	100	74.537	Macaca_mulatta
ENSLOCG00000007283	sall1b	93	74.698	ENSMNEG00000034770	SALL1	100	74.638	Macaca_nemestrina
ENSLOCG00000007283	sall1b	99	74.271	ENSMLEG00000036406	SALL1	100	74.617	Mandrillus_leucophaeus
ENSLOCG00000007283	sall1b	94	100.000	ENSMAMG00000004164	sall1a	98	100.000	Mastacembelus_armatus
ENSLOCG00000007283	sall1b	100	76.929	ENSMZEG00005006479	sall1a	100	77.005	Maylandia_zebra
ENSLOCG00000007283	sall1b	98	76.031	ENSMGAG00000004704	SALL1	100	76.641	Meleagris_gallopavo
ENSLOCG00000007283	sall1b	99	71.910	ENSMAUG00000019093	Sall1	100	72.156	Mesocricetus_auratus
ENSLOCG00000007283	sall1b	100	73.767	ENSMICG00000036486	SALL1	100	73.692	Microcebus_murinus
ENSLOCG00000007283	sall1b	99	77.039	ENSMMOG00000016400	sall1a	99	77.214	Mola_mola
ENSLOCG00000007283	sall1b	99	75.655	ENSMODG00000013114	SALL1	99	75.730	Monodelphis_domestica
ENSLOCG00000007283	sall1b	94	92.000	ENSMALG00000013400	sall1a	99	92.000	Monopterus_albus
ENSLOCG00000007283	sall1b	99	71.450	MGP_CAROLIEiJ_G0031362	Sall1	100	71.770	Mus_caroli
ENSLOCG00000007283	sall1b	99	71.471	ENSMUSG00000031665	Sall1	100	71.503	Mus_musculus
ENSLOCG00000007283	sall1b	99	70.843	MGP_PahariEiJ_G0022961	Sall1	99	71.216	Mus_pahari
ENSLOCG00000007283	sall1b	99	71.621	MGP_SPRETEiJ_G0032480	Sall1	100	71.652	Mus_spretus
ENSLOCG00000007283	sall1b	98	72.091	ENSMPUG00000003265	SALL1	96	72.490	Mustela_putorius_furo
ENSLOCG00000007283	sall1b	98	69.810	ENSMLUG00000015541	SALL1	100	70.382	Myotis_lucifugus
ENSLOCG00000007283	sall1b	100	77.156	ENSNBRG00000009307	sall1a	100	77.231	Neolamprologus_brichardi
ENSLOCG00000007283	sall1b	98	67.683	ENSNLEG00000001008	SALL1	99	68.113	Nomascus_leucogenys
ENSLOCG00000007283	sall1b	99	75.336	ENSMEUG00000012206	SALL1	99	75.336	Notamacropus_eugenii
ENSLOCG00000007283	sall1b	74	77.533	ENSOPRG00000005645	SALL1	72	77.339	Ochotona_princeps
ENSLOCG00000007283	sall1b	99	73.972	ENSODEG00000003685	SALL1	100	73.438	Octodon_degus
ENSLOCG00000007283	sall1b	100	77.266	ENSONIG00000002831	sall1a	100	77.341	Oreochromis_niloticus
ENSLOCG00000007283	sall1b	88	78.112	ENSOANG00000013399	SALL1	96	78.112	Ornithorhynchus_anatinus
ENSLOCG00000007283	sall1b	100	77.173	ENSORLG00000013827	sall1a	100	77.583	Oryzias_latipes
ENSLOCG00000007283	sall1b	100	77.022	ENSORLG00020020570	sall1a	100	77.098	Oryzias_latipes_hni
ENSLOCG00000007283	sall1b	100	77.098	ENSORLG00015018830	sall1a	100	77.333	Oryzias_latipes_hsok
ENSLOCG00000007283	sall1b	100	76.946	ENSOMEG00000016043	sall1a	100	76.946	Oryzias_melastigma
ENSLOCG00000007283	sall1b	99	74.420	ENSOGAG00000027316	SALL1	100	74.365	Otolemur_garnettii
ENSLOCG00000007283	sall1b	100	68.507	ENSOARG00000017583	SALL1	100	68.499	Ovis_aries
ENSLOCG00000007283	sall1b	98	74.162	ENSPPAG00000035657	SALL1	99	74.904	Pan_paniscus
ENSLOCG00000007283	sall1b	97	55.326	ENSPPAG00000035136	-	98	55.862	Pan_paniscus
ENSLOCG00000007283	sall1b	99	71.940	ENSPPRG00000023283	SALL1	100	72.816	Panthera_pardus
ENSLOCG00000007283	sall1b	54	84.571	ENSPTIG00000013539	-	95	78.195	Panthera_tigris_altaica
ENSLOCG00000007283	sall1b	99	73.972	ENSPTRG00000008108	SALL1	99	74.570	Pan_troglodytes
ENSLOCG00000007283	sall1b	96	55.495	ENSPTRG00000045256	-	97	56.041	Pan_troglodytes
ENSLOCG00000007283	sall1b	99	74.196	ENSPANG00000024176	SALL1	100	74.738	Papio_anubis
ENSLOCG00000007283	sall1b	94	92.000	ENSPKIG00000005383	-	100	92.000	Paramormyrops_kingsleyae
ENSLOCG00000007283	sall1b	94	81.481	ENSPKIG00000022251	sall1a	100	81.481	Paramormyrops_kingsleyae
ENSLOCG00000007283	sall1b	100	75.749	ENSPSIG00000008582	SALL1	100	76.123	Pelodiscus_sinensis
ENSLOCG00000007283	sall1b	93	96.154	ENSPMGG00000021788	sall1a	98	96.154	Periophthalmus_magnuspinnatus
ENSLOCG00000007283	sall1b	51	59.065	ENSPMAG00000008148	sall1b	97	51.618	Petromyzon_marinus
ENSLOCG00000007283	sall1b	99	75.281	ENSPCIG00000017840	SALL1	99	75.262	Phascolarctos_cinereus
ENSLOCG00000007283	sall1b	98	77.283	ENSPFOG00000015799	sall1a	96	77.360	Poecilia_formosa
ENSLOCG00000007283	sall1b	100	77.811	ENSPLAG00000022539	sall1a	100	77.887	Poecilia_latipinna
ENSLOCG00000007283	sall1b	100	78.038	ENSPMEG00000020894	sall1a	100	78.113	Poecilia_mexicana
ENSLOCG00000007283	sall1b	94	100.000	ENSPREG00000006802	sall1a	100	100.000	Poecilia_reticulata
ENSLOCG00000007283	sall1b	90	73.847	ENSPPYG00000007345	SALL1	96	74.267	Pongo_abelii
ENSLOCG00000007283	sall1b	85	75.000	ENSPCAG00000008162	SALL1	93	75.000	Procavia_capensis
ENSLOCG00000007283	sall1b	99	73.672	ENSPCOG00000028192	SALL1	100	73.462	Propithecus_coquereli
ENSLOCG00000007283	sall1b	66	74.048	ENSPVAG00000015374	SALL1	100	74.279	Pteropus_vampyrus
ENSLOCG00000007283	sall1b	100	77.080	ENSPNYG00000010865	sall1a	100	77.156	Pundamilia_nyererei
ENSLOCG00000007283	sall1b	100	76.581	ENSPNAG00000023644	sall1a	100	76.679	Pygocentrus_nattereri
ENSLOCG00000007283	sall1b	99	55.224	ENSPNAG00000007442	sall1b	99	55.324	Pygocentrus_nattereri
ENSLOCG00000007283	sall1b	100	46.143	ENSPNAG00000028248	-	100	46.537	Pygocentrus_nattereri
ENSLOCG00000007283	sall1b	99	71.749	ENSRNOG00000013907	Sall1	100	71.705	Rattus_norvegicus
ENSLOCG00000007283	sall1b	93	74.113	ENSRBIG00000015707	SALL1	100	74.698	Rhinopithecus_bieti
ENSLOCG00000007283	sall1b	97	74.808	ENSRROG00000035777	SALL1	100	74.617	Rhinopithecus_roxellana
ENSLOCG00000007283	sall1b	99	74.196	ENSSBOG00000032186	SALL1	99	74.570	Saimiri_boliviensis_boliviensis
ENSLOCG00000007283	sall1b	99	74.682	ENSSHAG00000009477	SALL1	99	74.906	Sarcophilus_harrisii
ENSLOCG00000007283	sall1b	100	74.662	ENSSFOG00015020020	sall1a	100	75.038	Scleropages_formosus
ENSLOCG00000007283	sall1b	98	76.055	ENSSFOG00015001590	sall1a	99	76.055	Scleropages_formosus
ENSLOCG00000007283	sall1b	99	77.719	ENSSMAG00000009160	sall1a	99	78.064	Scophthalmus_maximus
ENSLOCG00000007283	sall1b	90	60.870	ENSSDUG00000000748	sall1b	99	59.184	Seriola_dumerili
ENSLOCG00000007283	sall1b	99	78.900	ENSSDUG00000006507	sall1a	99	78.868	Seriola_dumerili
ENSLOCG00000007283	sall1b	99	78.927	ENSSLDG00000017721	sall1a	99	78.943	Seriola_lalandi_dorsalis
ENSLOCG00000007283	sall1b	97	72.998	ENSSARG00000000661	SALL1	99	73.786	Sorex_araneus
ENSLOCG00000007283	sall1b	100	76.123	ENSSPUG00000000156	SALL1	100	76.347	Sphenodon_punctatus
ENSLOCG00000007283	sall1b	100	78.765	ENSSPAG00000021615	sall1a	100	78.765	Stegastes_partitus
ENSLOCG00000007283	sall1b	99	72.591	ENSSSCG00000002836	SALL1	100	72.985	Sus_scrofa
ENSLOCG00000007283	sall1b	100	76.255	ENSTGUG00000007514	SALL1	100	76.479	Taeniopygia_guttata
ENSLOCG00000007283	sall1b	92	75.103	ENSTRUG00000008950	sall1a	100	74.979	Takifugu_rubripes
ENSLOCG00000007283	sall1b	92	74.281	ENSTNIG00000004257	sall1a	100	74.466	Tetraodon_nigroviridis
ENSLOCG00000007283	sall1b	62	76.552	ENSTBEG00000002119	-	53	76.712	Tupaia_belangeri
ENSLOCG00000007283	sall1b	90	72.255	ENSUAMG00000023379	-	92	72.674	Ursus_americanus
ENSLOCG00000007283	sall1b	90	72.037	ENSVVUG00000019383	-	99	72.287	Vulpes_vulpes
ENSLOCG00000007283	sall1b	97	35.276	ENSXETG00000017176	sall2	99	35.276	Xenopus_tropicalis
ENSLOCG00000007283	sall1b	100	69.394	ENSXETG00000018417	sall1	100	69.410	Xenopus_tropicalis
ENSLOCG00000007283	sall1b	100	77.811	ENSXMAG00000016273	sall1a	100	77.887	Xiphophorus_maculatus