EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000007385 (Gene tree)
Gene ID: 102693206
Gene Symbol: ddx23
Alias: wu:fi39b12|zgc:63742
Full Name: DEAD-box helicase 23
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 13952 bases
Position: chrLG4:18137780-18151731
Accession: 102693206
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000008980	DEAD	PF00270.29	2.1e-53	1	1
ENSLOCP00000008960	DEAD	PF00270.29	2.1e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000008971	-	2563	-	ENSLOCP00000008960	818 (aa)	-	W5MKQ1
ENSLOCT00000008991	-	2560	XM_006629418	ENSLOCP00000008980	817 (aa)	XP_006629481	W5MKS1

Gene Model

Click here to download ENSLOCG00000007385's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000007385's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000007385	ddx23	50	30.488	ENSLOCG00000000847	eif4a2	91	30.244
ENSLOCG00000007385	ddx23	51	39.151	ENSLOCG00000013534	ddx5	63	39.151
ENSLOCG00000007385	ddx23	50	38.118	ENSLOCG00000002122	ddx3xa	60	36.652
ENSLOCG00000007385	ddx23	50	40.580	ENSLOCG00000016170	ddx43	57	40.821
ENSLOCG00000007385	ddx23	52	40.185	ENSLOCG00000011956	DDX41	65	40.185
ENSLOCG00000007385	ddx23	54	35.440	ENSLOCG00000007710	ddx59	68	35.054
ENSLOCG00000007385	ddx23	51	31.894	ENSLOCG00000000770	ddx6	76	31.884

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000007385	ddx23	100	86.861	ENSG00000174243	DDX23	88	90.371	Homo_sapiens
ENSLOCG00000007385	ddx23	100	90.709	ENSAPOG00000003760	ddx23	100	88.142	Acanthochromis_polyacanthus
ENSLOCG00000007385	ddx23	100	86.861	ENSAMEG00000007123	DDX23	88	90.371	Ailuropoda_melanoleuca
ENSLOCG00000007385	ddx23	81	94.848	ENSACIG00000000022	ddx23	88	94.848	Amphilophus_citrinellus
ENSLOCG00000007385	ddx23	100	90.709	ENSAOCG00000017348	ddx23	100	88.142	Amphiprion_ocellaris
ENSLOCG00000007385	ddx23	100	89.853	ENSAPEG00000016857	ddx23	91	93.388	Amphiprion_percula
ENSLOCG00000007385	ddx23	100	89.120	ENSATEG00000016800	ddx23	100	88.020	Anabas_testudineus
ENSLOCG00000007385	ddx23	99	77.295	ENSAPLG00000002868	DDX23	90	81.572	Anas_platyrhynchos
ENSLOCG00000007385	ddx23	100	85.401	ENSACAG00000025589	DDX23	85	90.496	Anolis_carolinensis
ENSLOCG00000007385	ddx23	100	86.740	ENSANAG00000018663	DDX23	88	90.234	Aotus_nancymaae
ENSLOCG00000007385	ddx23	100	90.854	ENSAMXG00000017597	ddx23	89	93.388	Astyanax_mexicanus
ENSLOCG00000007385	ddx23	100	86.740	ENSBTAG00000021810	DDX23	88	90.234	Bos_taurus
ENSLOCG00000007385	ddx23	71	67.814	WBGene00017162	ddx-23	79	67.814	Caenorhabditis_elegans
ENSLOCG00000007385	ddx23	100	86.740	ENSCJAG00000020775	DDX23	88	90.234	Callithrix_jacchus
ENSLOCG00000007385	ddx23	100	86.740	ENSCAFG00000025422	DDX23	88	90.234	Canis_familiaris
ENSLOCG00000007385	ddx23	100	86.740	ENSCAFG00020013383	DDX23	88	90.234	Canis_lupus_dingo
ENSLOCG00000007385	ddx23	100	86.618	ENSCHIG00000018783	DDX23	88	90.096	Capra_hircus
ENSLOCG00000007385	ddx23	100	86.618	ENSTSYG00000005429	DDX23	88	90.096	Carlito_syrichta
ENSLOCG00000007385	ddx23	100	86.236	ENSCPOG00000003278	DDX23	88	89.821	Cavia_porcellus
ENSLOCG00000007385	ddx23	89	90.000	ENSCCAG00000029177	DDX23	86	90.000	Cebus_capucinus
ENSLOCG00000007385	ddx23	100	86.861	ENSCATG00000039797	DDX23	88	90.371	Cercocebus_atys
ENSLOCG00000007385	ddx23	100	72.927	ENSCATG00000032335	-	92	76.327	Cercocebus_atys
ENSLOCG00000007385	ddx23	100	86.740	ENSCLAG00000002986	DDX23	88	89.959	Chinchilla_lanigera
ENSLOCG00000007385	ddx23	100	86.861	ENSCSAG00000006240	DDX23	88	90.371	Chlorocebus_sabaeus
ENSLOCG00000007385	ddx23	84	85.217	ENSCHOG00000009027	DDX23	86	89.244	Choloepus_hoffmanni
ENSLOCG00000007385	ddx23	100	85.836	ENSCPBG00000019988	DDX23	89	91.334	Chrysemys_picta_bellii
ENSLOCG00000007385	ddx23	97	66.709	ENSCING00000001913	-	89	73.568	Ciona_intestinalis
ENSLOCG00000007385	ddx23	83	66.569	ENSCSAVG00000004158	-	100	65.741	Ciona_savignyi
ENSLOCG00000007385	ddx23	87	90.884	ENSCANG00000040182	DDX23	100	90.884	Colobus_angolensis_palliatus
ENSLOCG00000007385	ddx23	100	70.818	ENSCANG00000042510	-	91	75.000	Colobus_angolensis_palliatus
ENSLOCG00000007385	ddx23	100	86.220	ENSCGRG00001015090	Ddx23	89	89.959	Cricetulus_griseus_chok1gshd
ENSLOCG00000007385	ddx23	100	86.220	ENSCGRG00000016314	Ddx23	89	89.959	Cricetulus_griseus_crigri
ENSLOCG00000007385	ddx23	83	94.282	ENSCSEG00000020970	ddx23	90	92.022	Cynoglossus_semilaevis
ENSLOCG00000007385	ddx23	100	89.106	ENSCVAG00000015745	ddx23	90	92.837	Cyprinodon_variegatus
ENSLOCG00000007385	ddx23	87	93.108	ENSDARG00000021945	ddx23	90	92.403	Danio_rerio
ENSLOCG00000007385	ddx23	100	86.740	ENSDNOG00000043176	DDX23	88	90.234	Dasypus_novemcinctus
ENSLOCG00000007385	ddx23	100	86.861	ENSDORG00000012659	Ddx23	88	90.371	Dipodomys_ordii
ENSLOCG00000007385	ddx23	85	70.141	FBgn0032690	CG10333	72	77.013	Drosophila_melanogaster
ENSLOCG00000007385	ddx23	90	87.045	ENSETEG00000015816	DDX23	89	87.052	Echinops_telfairi
ENSLOCG00000007385	ddx23	81	84.361	ENSEBUG00000003319	ddx23	93	83.788	Eptatretus_burgeri
ENSLOCG00000007385	ddx23	100	86.983	ENSEASG00005000455	DDX23	88	90.371	Equus_asinus_asinus
ENSLOCG00000007385	ddx23	100	86.861	ENSECAG00000016681	DDX23	88	90.371	Equus_caballus
ENSLOCG00000007385	ddx23	100	79.469	ENSEEUG00000009658	DDX23	88	81.706	Erinaceus_europaeus
ENSLOCG00000007385	ddx23	100	88.185	ENSELUG00000015358	ddx23	94	91.472	Esox_lucius
ENSLOCG00000007385	ddx23	100	86.740	ENSFCAG00000000082	DDX23	88	90.234	Felis_catus
ENSLOCG00000007385	ddx23	100	84.709	ENSFALG00000000133	DDX23	89	88.324	Ficedula_albicollis
ENSLOCG00000007385	ddx23	100	86.861	ENSFDAG00000017059	DDX23	88	89.959	Fukomys_damarensis
ENSLOCG00000007385	ddx23	100	89.364	ENSFHEG00000017499	ddx23	90	93.939	Fundulus_heteroclitus
ENSLOCG00000007385	ddx23	99	87.329	ENSGMOG00000009592	ddx23	92	90.496	Gadus_morhua
ENSLOCG00000007385	ddx23	100	85.976	ENSGALG00000032307	DDX23	89	90.922	Gallus_gallus
ENSLOCG00000007385	ddx23	100	87.897	ENSGAFG00000012366	ddx23	90	92.837	Gambusia_affinis
ENSLOCG00000007385	ddx23	99	88.504	ENSGACG00000003024	ddx23	99	94.966	Gasterosteus_aculeatus
ENSLOCG00000007385	ddx23	100	85.958	ENSGAGG00000007790	DDX23	89	91.472	Gopherus_agassizii
ENSLOCG00000007385	ddx23	100	86.861	ENSGGOG00000015252	DDX23	100	94.079	Gorilla_gorilla
ENSLOCG00000007385	ddx23	100	88.631	ENSHBUG00000011876	ddx23	100	87.897	Haplochromis_burtoni
ENSLOCG00000007385	ddx23	100	86.618	ENSHGLG00000004292	DDX23	88	89.959	Heterocephalus_glaber_female
ENSLOCG00000007385	ddx23	100	86.618	ENSHGLG00100017585	DDX23	88	89.959	Heterocephalus_glaber_male
ENSLOCG00000007385	ddx23	100	87.042	ENSHCOG00000019338	ddx23	90	92.011	Hippocampus_comes
ENSLOCG00000007385	ddx23	100	90.098	ENSIPUG00000005247	DDX23	90	92.837	Ictalurus_punctatus
ENSLOCG00000007385	ddx23	100	86.740	ENSSTOG00000004219	DDX23	88	90.096	Ictidomys_tridecemlineatus
ENSLOCG00000007385	ddx23	100	86.496	ENSJJAG00000018994	Ddx23	88	90.234	Jaculus_jaculus
ENSLOCG00000007385	ddx23	100	88.058	ENSKMAG00000012060	ddx23	100	87.760	Kryptolebias_marmoratus
ENSLOCG00000007385	ddx23	100	88.020	ENSLBEG00000019475	ddx23	91	92.000	Labrus_bergylta
ENSLOCG00000007385	ddx23	92	88.904	ENSLACG00000016977	DDX23	96	89.959	Latimeria_chalumnae
ENSLOCG00000007385	ddx23	100	86.740	ENSLAFG00000014227	DDX23	88	90.096	Loxodonta_africana
ENSLOCG00000007385	ddx23	100	86.861	ENSMFAG00000038666	DDX23	88	90.371	Macaca_fascicularis
ENSLOCG00000007385	ddx23	100	86.861	ENSMMUG00000008432	DDX23	100	94.079	Macaca_mulatta
ENSLOCG00000007385	ddx23	100	86.618	ENSMNEG00000040016	DDX23	88	90.096	Macaca_nemestrina
ENSLOCG00000007385	ddx23	100	72.561	ENSMNEG00000045260	-	90	76.138	Macaca_nemestrina
ENSLOCG00000007385	ddx23	100	71.184	ENSMLEG00000035096	-	92	75.482	Mandrillus_leucophaeus
ENSLOCG00000007385	ddx23	100	86.861	ENSMLEG00000042846	DDX23	88	90.371	Mandrillus_leucophaeus
ENSLOCG00000007385	ddx23	100	89.364	ENSMAMG00000024144	ddx23	90	92.690	Mastacembelus_armatus
ENSLOCG00000007385	ddx23	100	88.631	ENSMZEG00005026086	ddx23	100	87.897	Maylandia_zebra
ENSLOCG00000007385	ddx23	100	86.098	ENSMAUG00000012336	Ddx23	89	89.821	Mesocricetus_auratus
ENSLOCG00000007385	ddx23	100	86.098	ENSMICG00000017541	DDX23	89	90.371	Microcebus_murinus
ENSLOCG00000007385	ddx23	100	86.220	ENSMOCG00000018987	Ddx23	89	89.684	Microtus_ochrogaster
ENSLOCG00000007385	ddx23	100	82.987	ENSMMOG00000012406	ddx23	85	92.424	Mola_mola
ENSLOCG00000007385	ddx23	100	86.951	ENSMODG00000009975	DDX23	89	89.959	Monodelphis_domestica
ENSLOCG00000007385	ddx23	100	89.596	ENSMALG00000022366	ddx23	100	87.286	Monopterus_albus
ENSLOCG00000007385	ddx23	100	86.098	MGP_CAROLIEiJ_G0020240	Ddx23	89	89.821	Mus_caroli
ENSLOCG00000007385	ddx23	100	86.098	ENSMUSG00000003360	Ddx23	89	89.821	Mus_musculus
ENSLOCG00000007385	ddx23	100	85.976	MGP_PahariEiJ_G0020243	Ddx23	89	89.821	Mus_pahari
ENSLOCG00000007385	ddx23	100	86.098	MGP_SPRETEiJ_G0021137	Ddx23	89	89.821	Mus_spretus
ENSLOCG00000007385	ddx23	100	86.861	ENSMPUG00000014739	DDX23	88	90.371	Mustela_putorius_furo
ENSLOCG00000007385	ddx23	100	86.220	ENSMLUG00000011033	-	89	90.234	Myotis_lucifugus
ENSLOCG00000007385	ddx23	100	83.455	ENSMLUG00000003683	-	88	86.933	Myotis_lucifugus
ENSLOCG00000007385	ddx23	100	86.077	ENSNGAG00000019018	Ddx23	88	90.096	Nannospalax_galili
ENSLOCG00000007385	ddx23	100	85.816	ENSNBRG00000022928	ddx23	100	84.988	Neolamprologus_brichardi
ENSLOCG00000007385	ddx23	100	80.292	ENSNLEG00000017864	DDX23	88	82.944	Nomascus_leucogenys
ENSLOCG00000007385	ddx23	100	86.951	ENSMEUG00000009477	DDX23	89	89.959	Notamacropus_eugenii
ENSLOCG00000007385	ddx23	100	85.976	ENSOPRG00000007170	-	89	90.234	Ochotona_princeps
ENSLOCG00000007385	ddx23	100	86.983	ENSODEG00000003592	DDX23	88	90.096	Octodon_degus
ENSLOCG00000007385	ddx23	100	88.875	ENSONIG00000017048	ddx23	100	88.142	Oreochromis_niloticus
ENSLOCG00000007385	ddx23	100	86.861	ENSOCUG00000001414	DDX23	88	89.959	Oryctolagus_cuniculus
ENSLOCG00000007385	ddx23	100	88.264	ENSORLG00000012330	ddx23	89	92.686	Oryzias_latipes
ENSLOCG00000007385	ddx23	100	88.386	ENSORLG00020017586	ddx23	89	92.827	Oryzias_latipes_hni
ENSLOCG00000007385	ddx23	91	85.220	ENSORLG00015012361	ddx23	88	94.091	Oryzias_latipes_hsok
ENSLOCG00000007385	ddx23	100	88.494	ENSOMEG00000006453	ddx23	90	92.975	Oryzias_melastigma
ENSLOCG00000007385	ddx23	100	86.602	ENSOGAG00000016813	DDX23	88	90.234	Otolemur_garnettii
ENSLOCG00000007385	ddx23	100	86.618	ENSOARG00000019105	DDX23	80	90.096	Ovis_aries
ENSLOCG00000007385	ddx23	100	86.861	ENSPPAG00000037807	DDX23	100	94.079	Pan_paniscus
ENSLOCG00000007385	ddx23	100	63.923	ENSPPAG00000038775	-	88	67.887	Pan_paniscus
ENSLOCG00000007385	ddx23	100	86.740	ENSPPRG00000015345	DDX23	88	90.234	Panthera_pardus
ENSLOCG00000007385	ddx23	100	86.740	ENSPTIG00000018873	DDX23	88	90.234	Panthera_tigris_altaica
ENSLOCG00000007385	ddx23	100	66.788	ENSPTRG00000051972	-	88	69.284	Pan_troglodytes
ENSLOCG00000007385	ddx23	100	86.740	ENSPTRG00000004887	DDX23	100	94.079	Pan_troglodytes
ENSLOCG00000007385	ddx23	100	86.861	ENSPANG00000019459	DDX23	81	90.371	Papio_anubis
ENSLOCG00000007385	ddx23	89	84.739	ENSPANG00000035074	-	88	84.739	Papio_anubis
ENSLOCG00000007385	ddx23	100	91.220	ENSPKIG00000024110	ddx23	100	91.341	Paramormyrops_kingsleyae
ENSLOCG00000007385	ddx23	100	75.336	ENSPSIG00000002834	DDX23	91	80.495	Pelodiscus_sinensis
ENSLOCG00000007385	ddx23	100	84.578	ENSPMGG00000010243	ddx23	86	95.000	Periophthalmus_magnuspinnatus
ENSLOCG00000007385	ddx23	100	86.098	ENSPEMG00000011305	Ddx23	89	89.959	Peromyscus_maniculatus_bairdii
ENSLOCG00000007385	ddx23	92	79.973	ENSPMAG00000008625	ddx23	97	82.579	Petromyzon_marinus
ENSLOCG00000007385	ddx23	100	86.951	ENSPCIG00000027691	DDX23	89	89.959	Phascolarctos_cinereus
ENSLOCG00000007385	ddx23	100	88.998	ENSPFOG00000012159	ddx23	90	93.251	Poecilia_formosa
ENSLOCG00000007385	ddx23	100	88.494	ENSPLAG00000005052	ddx23	90	93.388	Poecilia_latipinna
ENSLOCG00000007385	ddx23	100	88.372	ENSPMEG00000015385	ddx23	90	93.251	Poecilia_mexicana
ENSLOCG00000007385	ddx23	100	89.976	ENSPREG00000007074	ddx23	90	93.113	Poecilia_reticulata
ENSLOCG00000007385	ddx23	100	86.861	ENSPPYG00000004468	DDX23	85	90.371	Pongo_abelii
ENSLOCG00000007385	ddx23	87	90.323	ENSPCAG00000002016	DDX23	87	90.323	Procavia_capensis
ENSLOCG00000007385	ddx23	100	86.740	ENSPCOG00000025915	DDX23	100	94.079	Propithecus_coquereli
ENSLOCG00000007385	ddx23	100	86.861	ENSPVAG00000009818	DDX23	88	90.371	Pteropus_vampyrus
ENSLOCG00000007385	ddx23	100	85.816	ENSPNYG00000021038	ddx23	86	95.303	Pundamilia_nyererei
ENSLOCG00000007385	ddx23	83	94.519	ENSPNAG00000019203	ddx23	89	95.758	Pygocentrus_nattereri
ENSLOCG00000007385	ddx23	100	86.098	ENSRNOG00000060154	Ddx23	89	89.821	Rattus_norvegicus
ENSLOCG00000007385	ddx23	100	74.209	ENSRBIG00000040362	DDX23	87	75.103	Rhinopithecus_bieti
ENSLOCG00000007385	ddx23	100	70.818	ENSRBIG00000036337	-	93	76.446	Rhinopithecus_bieti
ENSLOCG00000007385	ddx23	93	75.494	ENSRROG00000045747	-	93	78.121	Rhinopithecus_roxellana
ENSLOCG00000007385	ddx23	100	86.861	ENSRROG00000028964	DDX23	88	90.371	Rhinopithecus_roxellana
ENSLOCG00000007385	ddx23	70	37.245	YDR243C	-	81	39.033	Saccharomyces_cerevisiae
ENSLOCG00000007385	ddx23	100	86.740	ENSSBOG00000025799	DDX23	88	90.234	Saimiri_boliviensis_boliviensis
ENSLOCG00000007385	ddx23	100	86.951	ENSSHAG00000006590	DDX23	89	89.959	Sarcophilus_harrisii
ENSLOCG00000007385	ddx23	100	90.098	ENSSFOG00015013273	ddx23	100	90.709	Scleropages_formosus
ENSLOCG00000007385	ddx23	100	88.998	ENSSMAG00000000529	ddx23	90	92.287	Scophthalmus_maximus
ENSLOCG00000007385	ddx23	100	88.998	ENSSDUG00000022459	ddx23	100	87.897	Seriola_dumerili
ENSLOCG00000007385	ddx23	100	88.509	ENSSLDG00000010453	ddx23	90	93.113	Seriola_lalandi_dorsalis
ENSLOCG00000007385	ddx23	83	94.429	ENSSARG00000004534	DDX23	81	94.429	Sorex_araneus
ENSLOCG00000007385	ddx23	100	86.010	ENSSPUG00000016044	DDX23	89	90.922	Sphenodon_punctatus
ENSLOCG00000007385	ddx23	100	88.631	ENSSPAG00000016482	ddx23	100	87.653	Stegastes_partitus
ENSLOCG00000007385	ddx23	100	86.983	ENSSSCG00000000176	DDX23	88	90.371	Sus_scrofa
ENSLOCG00000007385	ddx23	100	85.226	ENSTRUG00000000455	ddx23	92	90.746	Takifugu_rubripes
ENSLOCG00000007385	ddx23	87	90.884	ENSTBEG00000016909	DDX23	87	90.884	Tupaia_belangeri
ENSLOCG00000007385	ddx23	100	80.535	ENSTTRG00000004604	DDX23	88	83.219	Tursiops_truncatus
ENSLOCG00000007385	ddx23	100	86.861	ENSUAMG00000027082	DDX23	88	90.371	Ursus_americanus
ENSLOCG00000007385	ddx23	100	86.861	ENSUMAG00000006538	DDX23	88	90.371	Ursus_maritimus
ENSLOCG00000007385	ddx23	100	86.740	ENSVVUG00000019648	DDX23	88	90.234	Vulpes_vulpes
ENSLOCG00000007385	ddx23	100	80.049	ENSXETG00000009807	ddx23	84	87.830	Xenopus_tropicalis
ENSLOCG00000007385	ddx23	100	84.455	ENSXCOG00000011648	ddx23	92	90.470	Xiphophorus_couchianus
ENSLOCG00000007385	ddx23	100	88.142	ENSXMAG00000017387	ddx23	90	93.113	Xiphophorus_maculatus