EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000007386 (Gene tree)
Gene ID: 102695810
Gene Symbol: chd6
Alias: si:dkey-6e2.3|zmp:0000000556
Full Name: chromodomain helicase DNA binding protein 6
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 31443 bases
Position: chrLG18:14989683-15021125
Accession: 102695810
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000008969	ResIII	PF04851.15	1.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000008980	-	8351	XM_006639746	ENSLOCP00000008969	2588 (aa)	-	W5MKR0

Gene Model

Click here to download ENSLOCG00000007386's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000007386's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000007386	chd6	71	68.586	ENSLOCG00000005062	chd7	62	67.797
ENSLOCG00000007386	chd6	72	62.197	ENSLOCG00000007225	chd9	75	64.599

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000007386	chd6	84	75.785	ENSG00000124177	CHD6	99	84.109	Homo_sapiens
ENSLOCG00000007386	chd6	85	72.231	ENSAPOG00000013736	chd6	63	78.635	Acanthochromis_polyacanthus
ENSLOCG00000007386	chd6	88	75.770	ENSAMEG00000009496	CHD6	72	80.312	Ailuropoda_melanoleuca
ENSLOCG00000007386	chd6	81	76.067	ENSATEG00000005608	chd6	62	79.870	Anabas_testudineus
ENSLOCG00000007386	chd6	79	80.600	ENSAPLG00000015592	CHD6	73	81.072	Anas_platyrhynchos
ENSLOCG00000007386	chd6	78	74.603	ENSACAG00000006842	CHD6	70	76.545	Anolis_carolinensis
ENSLOCG00000007386	chd6	84	75.543	ENSANAG00000037548	CHD6	94	86.990	Aotus_nancymaae
ENSLOCG00000007386	chd6	85	77.489	ENSAMXG00000009576	chd6	69	81.474	Astyanax_mexicanus
ENSLOCG00000007386	chd6	85	75.483	ENSBTAG00000005733	CHD6	73	80.164	Bos_taurus
ENSLOCG00000007386	chd6	84	75.483	ENSCJAG00000017920	CHD6	99	83.303	Callithrix_jacchus
ENSLOCG00000007386	chd6	83	75.725	ENSCAFG00000009236	CHD6	73	80.299	Canis_familiaris
ENSLOCG00000007386	chd6	82	75.875	ENSCAFG00020012906	CHD6	94	86.745	Canis_lupus_dingo
ENSLOCG00000007386	chd6	79	75.362	ENSCHIG00000017606	CHD6	69	80.232	Capra_hircus
ENSLOCG00000007386	chd6	67	81.660	ENSTSYG00000014635	CHD6	76	81.546	Carlito_syrichta
ENSLOCG00000007386	chd6	84	75.650	ENSCPOG00000015641	CHD6	73	80.177	Cavia_porcellus
ENSLOCG00000007386	chd6	84	75.543	ENSCCAG00000036828	CHD6	94	86.990	Cebus_capucinus
ENSLOCG00000007386	chd6	84	75.362	ENSCATG00000039248	CHD6	94	86.990	Cercocebus_atys
ENSLOCG00000007386	chd6	84	76.147	ENSCLAG00000013743	CHD6	72	80.380	Chinchilla_lanigera
ENSLOCG00000007386	chd6	84	75.664	ENSCSAG00000013997	CHD6	73	80.286	Chlorocebus_sabaeus
ENSLOCG00000007386	chd6	77	69.582	ENSCHOG00000012647	CHD6	65	79.075	Choloepus_hoffmanni
ENSLOCG00000007386	chd6	80	81.292	ENSCPBG00000019382	CHD6	73	82.555	Chrysemys_picta_bellii
ENSLOCG00000007386	chd6	84	75.664	ENSCANG00000043435	CHD6	94	86.990	Colobus_angolensis_palliatus
ENSLOCG00000007386	chd6	84	74.864	ENSCGRG00001002694	Chd6	73	80.260	Cricetulus_griseus_chok1gshd
ENSLOCG00000007386	chd6	85	80.813	ENSDARG00000017244	chd6	71	85.225	Danio_rerio
ENSLOCG00000007386	chd6	84	75.502	ENSDNOG00000004176	CHD6	73	80.709	Dasypus_novemcinctus
ENSLOCG00000007386	chd6	84	75.441	ENSEASG00005023433	CHD6	94	88.109	Equus_asinus_asinus
ENSLOCG00000007386	chd6	85	75.783	ENSECAG00000011761	CHD6	73	80.421	Equus_caballus
ENSLOCG00000007386	chd6	73	85.045	ENSELUG00000012309	chd6	86	85.119	Esox_lucius
ENSLOCG00000007386	chd6	88	75.816	ENSFCAG00000003572	CHD6	73	80.544	Felis_catus
ENSLOCG00000007386	chd6	88	75.407	ENSFALG00000012563	CHD6	69	81.976	Ficedula_albicollis
ENSLOCG00000007386	chd6	84	75.608	ENSFDAG00000013791	CHD6	72	80.380	Fukomys_damarensis
ENSLOCG00000007386	chd6	73	74.482	ENSGMOG00000011715	chd6	79	74.891	Gadus_morhua
ENSLOCG00000007386	chd6	81	74.921	ENSGACG00000000037	chd6	77	77.861	Gasterosteus_aculeatus
ENSLOCG00000007386	chd6	84	75.891	ENSGGOG00000013123	CHD6	94	86.990	Gorilla_gorilla
ENSLOCG00000007386	chd6	85	71.726	ENSHBUG00000014701	chd6	62	79.674	Haplochromis_burtoni
ENSLOCG00000007386	chd6	83	75.725	ENSHGLG00000004548	CHD6	71	80.177	Heterocephalus_glaber_female
ENSLOCG00000007386	chd6	83	75.725	ENSHGLG00100006401	CHD6	71	80.177	Heterocephalus_glaber_male
ENSLOCG00000007386	chd6	82	83.450	ENSIPUG00000003692	chd6	69	83.757	Ictalurus_punctatus
ENSLOCG00000007386	chd6	85	75.785	ENSSTOG00000013382	CHD6	73	80.109	Ictidomys_tridecemlineatus
ENSLOCG00000007386	chd6	85	75.837	ENSLACG00000010881	CHD6	73	80.943	Latimeria_chalumnae
ENSLOCG00000007386	chd6	84	76.012	ENSLAFG00000012144	CHD6	73	80.639	Loxodonta_africana
ENSLOCG00000007386	chd6	84	75.664	ENSMFAG00000032830	CHD6	94	86.990	Macaca_fascicularis
ENSLOCG00000007386	chd6	84	75.664	ENSMMUG00000020458	CHD6	94	86.990	Macaca_mulatta
ENSLOCG00000007386	chd6	84	75.664	ENSMNEG00000040847	CHD6	94	86.990	Macaca_nemestrina
ENSLOCG00000007386	chd6	84	75.592	ENSMLEG00000031965	CHD6	94	86.990	Mandrillus_leucophaeus
ENSLOCG00000007386	chd6	80	78.453	ENSMGAG00000001121	CHD6	74	78.739	Meleagris_gallopavo
ENSLOCG00000007386	chd6	78	75.330	ENSMICG00000016641	CHD6	94	86.990	Microcebus_murinus
ENSLOCG00000007386	chd6	73	82.638	ENSMODG00000000720	-	76	82.327	Monodelphis_domestica
ENSLOCG00000007386	chd6	87	75.106	MGP_CAROLIEiJ_G0024604	Chd6	83	86.952	Mus_caroli
ENSLOCG00000007386	chd6	86	75.167	ENSMUSG00000057133	Chd6	83	87.054	Mus_musculus
ENSLOCG00000007386	chd6	89	74.985	MGP_PahariEiJ_G0026048	Chd6	83	86.850	Mus_pahari
ENSLOCG00000007386	chd6	86	75.167	MGP_SPRETEiJ_G0025526	Chd6	83	87.054	Mus_spretus
ENSLOCG00000007386	chd6	83	75.635	ENSMPUG00000017695	CHD6	73	80.312	Mustela_putorius_furo
ENSLOCG00000007386	chd6	84	76.348	ENSMLUG00000016247	CHD6	72	81.116	Myotis_lucifugus
ENSLOCG00000007386	chd6	84	75.209	ENSNBRG00000013839	chd6	72	81.271	Neolamprologus_brichardi
ENSLOCG00000007386	chd6	84	74.300	ENSNLEG00000006496	CHD6	72	78.926	Nomascus_leucogenys
ENSLOCG00000007386	chd6	84	73.430	ENSOPRG00000013376	-	73	77.891	Ochotona_princeps
ENSLOCG00000007386	chd6	78	80.797	ENSONIG00000000393	chd6	74	84.078	Oreochromis_niloticus
ENSLOCG00000007386	chd6	75	74.367	ENSOANG00000014347	CHD6	62	79.918	Ornithorhynchus_anatinus
ENSLOCG00000007386	chd6	83	75.408	ENSOCUG00000012394	CHD6	74	80.000	Oryctolagus_cuniculus
ENSLOCG00000007386	chd6	86	72.924	ENSORLG00020021891	chd6	95	88.800	Oryzias_latipes_hni
ENSLOCG00000007386	chd6	84	75.289	ENSOGAG00000002427	CHD6	73	80.027	Otolemur_garnettii
ENSLOCG00000007386	chd6	79	73.868	ENSOARG00000002597	CHD6	69	78.567	Ovis_aries
ENSLOCG00000007386	chd6	88	75.877	ENSPPRG00000014756	CHD6	73	80.612	Panthera_pardus
ENSLOCG00000007386	chd6	88	75.695	ENSPTIG00000011094	CHD6	73	80.408	Panthera_tigris_altaica
ENSLOCG00000007386	chd6	84	75.785	ENSPTRG00000013504	CHD6	99	83.303	Pan_troglodytes
ENSLOCG00000007386	chd6	84	75.664	ENSPANG00000025554	CHD6	99	83.303	Papio_anubis
ENSLOCG00000007386	chd6	84	79.856	ENSPKIG00000005578	chd6	73	86.025	Paramormyrops_kingsleyae
ENSLOCG00000007386	chd6	76	79.669	ENSPMGG00000014877	chd6	82	79.738	Periophthalmus_magnuspinnatus
ENSLOCG00000007386	chd6	85	75.708	ENSPCIG00000028037	CHD6	73	80.707	Phascolarctos_cinereus
ENSLOCG00000007386	chd6	81	75.150	ENSPLAG00000003128	chd6	65	77.693	Poecilia_latipinna
ENSLOCG00000007386	chd6	78	78.571	ENSPREG00000022653	chd6	99	89.011	Poecilia_reticulata
ENSLOCG00000007386	chd6	84	75.604	ENSPPYG00000011016	CHD6	73	80.340	Pongo_abelii
ENSLOCG00000007386	chd6	82	75.725	ENSPCOG00000001089	CHD6	94	86.796	Propithecus_coquereli
ENSLOCG00000007386	chd6	84	76.790	ENSPNYG00000022516	chd6	72	82.947	Pundamilia_nyererei
ENSLOCG00000007386	chd6	84	77.557	ENSPNAG00000012825	chd6	71	82.129	Pygocentrus_nattereri
ENSLOCG00000007386	chd6	85	74.457	ENSRNOG00000016744	Chd6	73	79.904	Rattus_norvegicus
ENSLOCG00000007386	chd6	84	75.604	ENSSBOG00000022089	CHD6	99	83.303	Saimiri_boliviensis_boliviensis
ENSLOCG00000007386	chd6	85	75.588	ENSSHAG00000017072	CHD6	73	80.461	Sarcophilus_harrisii
ENSLOCG00000007386	chd6	85	81.709	ENSSFOG00015012920	chd6	79	81.047	Scleropages_formosus
ENSLOCG00000007386	chd6	53	94.737	ENSSARG00000002615	-	52	94.737	Sorex_araneus
ENSLOCG00000007386	chd6	85	75.814	ENSSSCG00000007360	CHD6	73	80.448	Sus_scrofa
ENSLOCG00000007386	chd6	81	80.147	ENSTGUG00000003179	CHD6	73	82.130	Taeniopygia_guttata
ENSLOCG00000007386	chd6	74	79.384	ENSTNIG00000017487	chd6	81	79.059	Tetraodon_nigroviridis
ENSLOCG00000007386	chd6	87	76.258	ENSTTRG00000013438	CHD6	71	81.648	Tursiops_truncatus
ENSLOCG00000007386	chd6	89	73.656	ENSUAMG00000024036	CHD6	94	86.745	Ursus_americanus
ENSLOCG00000007386	chd6	89	75.684	ENSUMAG00000002017	CHD6	94	86.745	Ursus_maritimus
ENSLOCG00000007386	chd6	79	68.603	ENSVPAG00000007941	CHD6	69	72.522	Vicugna_pacos
ENSLOCG00000007386	chd6	83	75.725	ENSVVUG00000029164	CHD6	73	80.312	Vulpes_vulpes
ENSLOCG00000007386	chd6	73	72.708	ENSXETG00000021445	chd6	69	72.708	Xenopus_tropicalis