EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLOCG00000007416 (Gene tree)
Gene ID: 102685009
Gene Symbol: rsl1d1
Alias: si:dkey-16i5.10
Full Name: ribosomal L1 domain containing 1
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 8837 bases
Position: chrLG13:14127410-14136246
Accession: 102685009
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000009000	Ribosomal_L1	PF00687.21	5.5e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000009011	-	4384	XM_006637322	ENSLOCP00000009000	419 (aa)	XP_006637385	W5MKU1

Gene Model

Click here to download ENSLOCG00000007416's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000007416's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000007416	rsl1d1	58	47.107	ENSG00000171490	RSL1D1	100	55.102	Homo_sapiens
ENSLOCG00000007416	rsl1d1	83	54.521	ENSAPOG00000004544	rsl1d1	94	55.342	Acanthochromis_polyacanthus
ENSLOCG00000007416	rsl1d1	74	56.740	ENSACIG00000006608	rsl1d1	96	57.460	Amphilophus_citrinellus
ENSLOCG00000007416	rsl1d1	75	60.123	ENSAOCG00000001548	rsl1d1	89	60.308	Amphiprion_ocellaris
ENSLOCG00000007416	rsl1d1	75	60.123	ENSAPEG00000003334	rsl1d1	89	60.308	Amphiprion_percula
ENSLOCG00000007416	rsl1d1	70	56.825	ENSATEG00000009247	rsl1d1	91	56.973	Anabas_testudineus
ENSLOCG00000007416	rsl1d1	58	54.357	ENSAPLG00000004451	RSL1D1	54	54.357	Anas_platyrhynchos
ENSLOCG00000007416	rsl1d1	58	47.107	ENSANAG00000028185	-	56	47.107	Aotus_nancymaae
ENSLOCG00000007416	rsl1d1	71	60.518	ENSACLG00000017535	rsl1d1	94	59.467	Astatotilapia_calliptera
ENSLOCG00000007416	rsl1d1	75	56.418	ENSAMXG00000008624	rsl1d1	89	56.716	Astyanax_mexicanus
ENSLOCG00000007416	rsl1d1	58	50.206	ENSBTAG00000014588	RSL1D1	50	50.206	Bos_taurus
ENSLOCG00000007416	rsl1d1	58	49.174	ENSCJAG00000042606	-	50	49.174	Callithrix_jacchus
ENSLOCG00000007416	rsl1d1	58	49.174	ENSCJAG00000008375	-	50	49.174	Callithrix_jacchus
ENSLOCG00000007416	rsl1d1	96	39.492	ENSCAFG00020024488	-	94	38.293	Canis_lupus_dingo
ENSLOCG00000007416	rsl1d1	97	38.940	ENSCHIG00000009867	-	88	40.633	Capra_hircus
ENSLOCG00000007416	rsl1d1	97	37.953	ENSCHIG00000018658	-	50	49.180	Capra_hircus
ENSLOCG00000007416	rsl1d1	96	36.364	ENSTSYG00000009276	RSL1D1	50	46.281	Carlito_syrichta
ENSLOCG00000007416	rsl1d1	96	34.211	ENSCPOG00000010630	RSL1D1	51	45.000	Cavia_porcellus
ENSLOCG00000007416	rsl1d1	58	48.347	ENSCCAG00000017391	-	50	48.347	Cebus_capucinus
ENSLOCG00000007416	rsl1d1	88	36.977	ENSCCAG00000031641	-	91	37.209	Cebus_capucinus
ENSLOCG00000007416	rsl1d1	58	44.628	ENSCCAG00000025197	-	52	44.628	Cebus_capucinus
ENSLOCG00000007416	rsl1d1	58	46.694	ENSCATG00000031153	RSL1D1	56	46.694	Cercocebus_atys
ENSLOCG00000007416	rsl1d1	58	46.473	ENSCLAG00000010975	RSL1D1	51	46.473	Chinchilla_lanigera
ENSLOCG00000007416	rsl1d1	58	46.694	ENSCSAG00000008255	RSL1D1	50	46.694	Chlorocebus_sabaeus
ENSLOCG00000007416	rsl1d1	58	56.017	ENSCPBG00000004564	RSL1D1	93	56.938	Chrysemys_picta_bellii
ENSLOCG00000007416	rsl1d1	54	32.895	ENSCING00000011810	-	100	32.895	Ciona_intestinalis
ENSLOCG00000007416	rsl1d1	63	32.090	ENSCSAVG00000011797	-	69	32.911	Ciona_savignyi
ENSLOCG00000007416	rsl1d1	58	46.694	ENSCANG00000029202	RSL1D1	52	46.694	Colobus_angolensis_palliatus
ENSLOCG00000007416	rsl1d1	56	46.610	ENSCGRG00001014989	Rsl1d1	92	36.098	Cricetulus_griseus_chok1gshd
ENSLOCG00000007416	rsl1d1	56	46.610	ENSCGRG00000001905	Rsl1d1	92	36.098	Cricetulus_griseus_crigri
ENSLOCG00000007416	rsl1d1	74	57.764	ENSCSEG00000019693	rsl1d1	89	56.535	Cynoglossus_semilaevis
ENSLOCG00000007416	rsl1d1	73	60.714	ENSCVAG00000000672	rsl1d1	98	56.160	Cyprinodon_variegatus
ENSLOCG00000007416	rsl1d1	75	63.407	ENSDARG00000055868	rsl1d1	84	62.893	Danio_rerio
ENSLOCG00000007416	rsl1d1	68	43.771	ENSEBUG00000005400	-	58	49.167	Eptatretus_burgeri
ENSLOCG00000007416	rsl1d1	76	62.500	ENSELUG00000019243	rsl1d1	93	61.682	Esox_lucius
ENSLOCG00000007416	rsl1d1	58	54.772	ENSFALG00000003869	RSL1D1	50	54.772	Ficedula_albicollis
ENSLOCG00000007416	rsl1d1	58	47.303	ENSFDAG00000011414	RSL1D1	54	47.303	Fukomys_damarensis
ENSLOCG00000007416	rsl1d1	75	58.228	ENSFHEG00000017235	rsl1d1	86	58.228	Fundulus_heteroclitus
ENSLOCG00000007416	rsl1d1	72	52.333	ENSGMOG00000013048	rsl1d1	97	52.000	Gadus_morhua
ENSLOCG00000007416	rsl1d1	59	52.209	ENSGALG00000033690	RSL1D1	75	45.808	Gallus_gallus
ENSLOCG00000007416	rsl1d1	84	51.955	ENSGAFG00000020794	rsl1d1	92	51.524	Gambusia_affinis
ENSLOCG00000007416	rsl1d1	75	56.646	ENSGACG00000004483	rsl1d1	88	56.646	Gasterosteus_aculeatus
ENSLOCG00000007416	rsl1d1	71	60.645	ENSHBUG00000001551	rsl1d1	93	58.806	Haplochromis_burtoni
ENSLOCG00000007416	rsl1d1	96	38.128	ENSHGLG00000006774	RSL1D1	88	38.481	Heterocephalus_glaber_female
ENSLOCG00000007416	rsl1d1	96	38.041	ENSHGLG00100017781	RSL1D1	87	38.422	Heterocephalus_glaber_male
ENSLOCG00000007416	rsl1d1	78	49.555	ENSHCOG00000015208	rsl1d1	88	53.074	Hippocampus_comes
ENSLOCG00000007416	rsl1d1	79	58.430	ENSIPUG00000001677	rsl1d1	90	59.302	Ictalurus_punctatus
ENSLOCG00000007416	rsl1d1	84	36.029	ENSJJAG00000012115	Rsl1d1	90	35.784	Jaculus_jaculus
ENSLOCG00000007416	rsl1d1	82	57.386	ENSKMAG00000021908	rsl1d1	97	57.386	Kryptolebias_marmoratus
ENSLOCG00000007416	rsl1d1	71	58.746	ENSLBEG00000001076	rsl1d1	89	57.994	Labrus_bergylta
ENSLOCG00000007416	rsl1d1	96	38.852	ENSLAFG00000013664	RSL1D1	91	38.596	Loxodonta_africana
ENSLOCG00000007416	rsl1d1	58	47.107	ENSMFAG00000037288	RSL1D1	50	47.107	Macaca_fascicularis
ENSLOCG00000007416	rsl1d1	58	47.107	ENSMMUG00000019632	RSL1D1	99	54.140	Macaca_mulatta
ENSLOCG00000007416	rsl1d1	58	46.694	ENSMNEG00000044196	RSL1D1	50	46.694	Macaca_nemestrina
ENSLOCG00000007416	rsl1d1	58	47.521	ENSMLEG00000042058	RSL1D1	51	47.521	Mandrillus_leucophaeus
ENSLOCG00000007416	rsl1d1	72	56.289	ENSMAMG00000004385	rsl1d1	95	53.022	Mastacembelus_armatus
ENSLOCG00000007416	rsl1d1	71	60.191	ENSMZEG00005007150	rsl1d1	94	59.172	Maylandia_zebra
ENSLOCG00000007416	rsl1d1	60	51.793	ENSMGAG00000000863	RSL1D1	71	46.302	Meleagris_gallopavo
ENSLOCG00000007416	rsl1d1	80	37.795	ENSMOCG00000017724	Rsl1d1	54	47.034	Microtus_ochrogaster
ENSLOCG00000007416	rsl1d1	71	56.081	ENSMMOG00000003730	rsl1d1	100	56.419	Mola_mola
ENSLOCG00000007416	rsl1d1	66	45.091	ENSMODG00000029494	-	60	45.725	Monodelphis_domestica
ENSLOCG00000007416	rsl1d1	94	40.870	ENSMODG00000004625	-	52	55.462	Monodelphis_domestica
ENSLOCG00000007416	rsl1d1	61	63.035	ENSMALG00000009531	rsl1d1	93	54.942	Monopterus_albus
ENSLOCG00000007416	rsl1d1	57	47.059	ENSMUSG00000005846	Rsl1d1	52	47.059	Mus_musculus
ENSLOCG00000007416	rsl1d1	57	46.639	MGP_PahariEiJ_G0016164	Rsl1d1	52	46.639	Mus_pahari
ENSLOCG00000007416	rsl1d1	57	47.059	MGP_SPRETEiJ_G0021352	Rsl1d1	52	47.059	Mus_spretus
ENSLOCG00000007416	rsl1d1	96	36.575	ENSMLUG00000000784	RSL1D1	51	48.047	Myotis_lucifugus
ENSLOCG00000007416	rsl1d1	95	32.886	ENSNGAG00000013578	-	54	42.169	Nannospalax_galili
ENSLOCG00000007416	rsl1d1	87	35.697	ENSNGAG00000009086	-	53	44.578	Nannospalax_galili
ENSLOCG00000007416	rsl1d1	70	58.654	ENSNBRG00000002777	rsl1d1	92	58.507	Neolamprologus_brichardi
ENSLOCG00000007416	rsl1d1	58	47.303	ENSNLEG00000012149	-	64	47.107	Nomascus_leucogenys
ENSLOCG00000007416	rsl1d1	96	39.862	ENSOPRG00000004442	-	53	48.333	Ochotona_princeps
ENSLOCG00000007416	rsl1d1	70	59.355	ENSONIG00000019757	rsl1d1	97	58.480	Oreochromis_niloticus
ENSLOCG00000007416	rsl1d1	56	44.492	ENSOANG00000009408	-	56	44.492	Ornithorhynchus_anatinus
ENSLOCG00000007416	rsl1d1	60	45.455	ENSOCUG00000004751	RSL1D1	54	45.455	Oryctolagus_cuniculus
ENSLOCG00000007416	rsl1d1	82	56.447	ENSORLG00000002877	rsl1d1	97	56.196	Oryzias_latipes
ENSLOCG00000007416	rsl1d1	82	55.908	ENSORLG00020006636	rsl1d1	97	55.908	Oryzias_latipes_hni
ENSLOCG00000007416	rsl1d1	82	55.840	ENSORLG00015005427	rsl1d1	97	55.840	Oryzias_latipes_hsok
ENSLOCG00000007416	rsl1d1	75	58.491	ENSOMEG00000008036	rsl1d1	97	54.596	Oryzias_melastigma
ENSLOCG00000007416	rsl1d1	97	37.554	ENSOARG00000006923	RSL1D1	51	48.770	Ovis_aries
ENSLOCG00000007416	rsl1d1	58	47.107	ENSPANG00000023073	RSL1D1	50	47.107	Papio_anubis
ENSLOCG00000007416	rsl1d1	97	52.088	ENSPKIG00000022687	rsl1d1	98	53.209	Paramormyrops_kingsleyae
ENSLOCG00000007416	rsl1d1	90	41.809	ENSPSIG00000011642	RSL1D1	84	41.568	Pelodiscus_sinensis
ENSLOCG00000007416	rsl1d1	70	59.539	ENSPMGG00000022261	rsl1d1	100	60.656	Periophthalmus_magnuspinnatus
ENSLOCG00000007416	rsl1d1	56	47.034	ENSPEMG00000009523	Rsl1d1	52	47.034	Peromyscus_maniculatus_bairdii
ENSLOCG00000007416	rsl1d1	51	48.598	ENSPMAG00000005446	rsl1d1	60	45.353	Petromyzon_marinus
ENSLOCG00000007416	rsl1d1	83	45.055	ENSPCIG00000026851	-	91	44.293	Phascolarctos_cinereus
ENSLOCG00000007416	rsl1d1	71	54.045	ENSPFOG00000005017	rsl1d1	75	57.721	Poecilia_formosa
ENSLOCG00000007416	rsl1d1	80	52.174	ENSPLAG00000000482	rsl1d1	83	51.613	Poecilia_latipinna
ENSLOCG00000007416	rsl1d1	85	51.944	ENSPMEG00000007032	rsl1d1	98	51.944	Poecilia_mexicana
ENSLOCG00000007416	rsl1d1	96	45.985	ENSPREG00000016619	rsl1d1	84	50.588	Poecilia_reticulata
ENSLOCG00000007416	rsl1d1	56	43.038	ENSPPYG00000019335	-	53	43.038	Pongo_abelii
ENSLOCG00000007416	rsl1d1	57	45.570	ENSPCOG00000022456	RSL1D1	59	45.570	Propithecus_coquereli
ENSLOCG00000007416	rsl1d1	57	50.000	ENSPVAG00000005014	RSL1D1	50	50.000	Pteropus_vampyrus
ENSLOCG00000007416	rsl1d1	71	60.191	ENSPNYG00000002850	rsl1d1	91	58.160	Pundamilia_nyererei
ENSLOCG00000007416	rsl1d1	74	59.697	ENSPNAG00000011848	rsl1d1	88	60.245	Pygocentrus_nattereri
ENSLOCG00000007416	rsl1d1	57	47.699	ENSRNOG00000048608	Rsl1d1l1	52	47.699	Rattus_norvegicus
ENSLOCG00000007416	rsl1d1	57	47.699	ENSRNOG00000061236	LOC108348298	52	47.699	Rattus_norvegicus
ENSLOCG00000007416	rsl1d1	58	46.694	ENSRBIG00000030317	RSL1D1	50	46.694	Rhinopithecus_bieti
ENSLOCG00000007416	rsl1d1	58	46.694	ENSRROG00000033658	RSL1D1	50	46.694	Rhinopithecus_roxellana
ENSLOCG00000007416	rsl1d1	98	53.301	ENSSFOG00015011354	rsl1d1	99	53.301	Scleropages_formosus
ENSLOCG00000007416	rsl1d1	68	59.930	ENSSMAG00000007957	rsl1d1	94	56.325	Scophthalmus_maximus
ENSLOCG00000007416	rsl1d1	70	56.369	ENSSDUG00000008447	rsl1d1	83	57.407	Seriola_dumerili
ENSLOCG00000007416	rsl1d1	70	57.006	ENSSLDG00000008293	rsl1d1	97	56.145	Seriola_lalandi_dorsalis
ENSLOCG00000007416	rsl1d1	96	42.794	ENSSPUG00000007525	RSL1D1	98	43.016	Sphenodon_punctatus
ENSLOCG00000007416	rsl1d1	75	57.738	ENSSPAG00000009755	rsl1d1	97	55.313	Stegastes_partitus
ENSLOCG00000007416	rsl1d1	58	56.432	ENSTGUG00000005174	RSL1D1	98	56.432	Taeniopygia_guttata
ENSLOCG00000007416	rsl1d1	71	56.250	ENSTRUG00000016970	rsl1d1	90	55.385	Takifugu_rubripes
ENSLOCG00000007416	rsl1d1	75	54.573	ENSTNIG00000012925	rsl1d1	89	55.657	Tetraodon_nigroviridis
ENSLOCG00000007416	rsl1d1	97	38.395	ENSTTRG00000011629	RSL1D1	95	37.339	Tursiops_truncatus
ENSLOCG00000007416	rsl1d1	96	39.367	ENSUAMG00000004470	RSL1D1	91	37.955	Ursus_americanus
ENSLOCG00000007416	rsl1d1	87	34.698	ENSUMAG00000003994	RSL1D1	86	36.548	Ursus_maritimus
ENSLOCG00000007416	rsl1d1	99	42.889	ENSXETG00000033365	-	96	41.756	Xenopus_tropicalis
ENSLOCG00000007416	rsl1d1	56	64.865	ENSXCOG00000003117	rsl1d1	100	64.865	Xiphophorus_couchianus
ENSLOCG00000007416	rsl1d1	58	63.071	ENSXMAG00000025111	rsl1d1	69	63.071	Xiphophorus_maculatus