EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000007491 (Gene tree)
Gene ID: 102695991
Gene Symbol: rab18a
Alias: fc62e07|wu:fc62e07|zgc:77145
Full Name: RAB18%2C member RAS oncogene family
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 12146 bases
Position: chrLG9:15845118-15857263
Accession: 102695991
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000009094	MMR_HSR1	PF01926.23	8.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000009105	-	1064	XM_006634091	ENSLOCP00000009094	205 (aa)	XP_006634154	W5ML35

Gene Model

Click here to download ENSLOCG00000007491's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000007491's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000007491	rab18a	79	46.914	ENSLOCG00000008865	rab11al	75	46.914
ENSLOCG00000007491	rab18a	93	41.451	ENSLOCG00000012566	rab5c	89	41.361
ENSLOCG00000007491	rab18a	87	37.430	ENSLOCG00000015191	rab41	83	37.430
ENSLOCG00000007491	rab18a	75	52.903	ENSLOCG00000014692	zgc:171927	72	52.903
ENSLOCG00000007491	rab18a	83	48.256	ENSLOCG00000001637	rab35b	96	43.939
ENSLOCG00000007491	rab18a	87	48.370	ENSLOCG00000005108	rab2a	86	48.108
ENSLOCG00000007491	rab18a	75	44.872	ENSLOCG00000015358	rab33a	65	44.872
ENSLOCG00000007491	rab18a	79	37.952	ENSLOCG00000018352	rab9b	82	37.952
ENSLOCG00000007491	rab18a	82	48.824	ENSLOCG00000005884	rab30	83	48.824
ENSLOCG00000007491	rab18a	79	47.531	ENSLOCG00000013835	rab11a	74	47.531
ENSLOCG00000007491	rab18a	80	38.690	ENSLOCG00000017414	rab9a	84	38.690
ENSLOCG00000007491	rab18a	93	39.487	ENSLOCG00000006591	rab5ab	81	41.436
ENSLOCG00000007491	rab18a	79	33.129	ENSLOCG00000016464	si:cabz01085950.1	81	33.929
ENSLOCG00000007491	rab18a	80	38.922	ENSLOCG00000014547	RAB7A	80	38.922
ENSLOCG00000007491	rab18a	82	42.012	ENSLOCG00000007029	rab22a	87	42.012
ENSLOCG00000007491	rab18a	77	32.278	ENSLOCG00000017737	-	79	32.278
ENSLOCG00000007491	rab18a	91	36.842	ENSLOCG00000015576	zgc:100918	81	39.521
ENSLOCG00000007491	rab18a	77	32.099	ENSLOCG00000010004	rheb	78	34.228
ENSLOCG00000007491	rab18a	93	43.137	ENSLOCG00000005509	rab14	76	49.390
ENSLOCG00000007491	rab18a	82	46.154	ENSLOCG00000012406	rab15	79	45.882
ENSLOCG00000007491	rab18a	83	36.047	ENSLOCG00000016999	rab23	71	36.047
ENSLOCG00000007491	rab18a	73	36.842	ENSLOCG00000002825	rab36	66	36.842
ENSLOCG00000007491	rab18a	83	41.040	ENSLOCG00000006748	-	81	41.040
ENSLOCG00000007491	rab18a	80	39.157	ENSLOCG00000003467	si:dkey-34d22.5	77	40.964
ENSLOCG00000007491	rab18a	97	45.050	ENSLOCG00000016037	rab1ab	88	47.253
ENSLOCG00000007491	rab18a	79	37.952	ENSLOCG00000017482	rab9b	82	37.952
ENSLOCG00000007491	rab18a	80	41.212	ENSLOCG00000003453	rab42a	78	41.212
ENSLOCG00000007491	rab18a	81	33.133	ENSLOCG00000000684	hrasb	87	33.133
ENSLOCG00000007491	rab18a	79	50.610	ENSLOCG00000002680	rab12	66	50.610
ENSLOCG00000007491	rab18a	78	35.220	ENSLOCG00000016767	rabl2	69	35.220
ENSLOCG00000007491	rab18a	76	44.586	ENSLOCG00000008881	rab25a	91	44.586
ENSLOCG00000007491	rab18a	98	31.000	ENSLOCG00000010440	nras	86	32.927
ENSLOCG00000007491	rab18a	83	30.286	ENSLOCG00000007682	rhebl1	92	30.286
ENSLOCG00000007491	rab18a	83	39.884	ENSLOCG00000014927	rab39bb	80	39.884
ENSLOCG00000007491	rab18a	73	42.208	ENSLOCG00000005904	zgc:101559	66	42.208
ENSLOCG00000007491	rab18a	89	33.152	ENSLOCG00000015334	kras	97	33.152
ENSLOCG00000007491	rab18a	82	35.294	ENSLOCG00000001886	mras	80	35.294
ENSLOCG00000007491	rab18a	93	35.385	ENSLOCG00000014749	si:dkey-13a21.4	89	35.519
ENSLOCG00000007491	rab18a	79	32.335	ENSLOCG00000016679	dnajc27	61	32.335
ENSLOCG00000007491	rab18a	93	37.563	ENSLOCG00000010535	rab33ba	72	41.566
ENSLOCG00000007491	rab18a	78	42.593	ENSLOCG00000015825	-	76	42.593

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000007491	rab18a	100	89.268	ENSAPOG00000010760	rab18a	100	89.268	Acanthochromis_polyacanthus
ENSLOCG00000007491	rab18a	100	77.561	ENSACIG00000009617	rab18a	100	77.561	Amphilophus_citrinellus
ENSLOCG00000007491	rab18a	100	88.780	ENSAOCG00000016233	rab18a	100	88.780	Amphiprion_ocellaris
ENSLOCG00000007491	rab18a	100	88.780	ENSAPEG00000005392	rab18a	100	88.780	Amphiprion_percula
ENSLOCG00000007491	rab18a	100	89.756	ENSATEG00000021911	rab18a	100	89.756	Anabas_testudineus
ENSLOCG00000007491	rab18a	100	91.220	ENSACAG00000005463	-	100	91.220	Anolis_carolinensis
ENSLOCG00000007491	rab18a	100	88.293	ENSACLG00000011484	rab18a	100	88.293	Astatotilapia_calliptera
ENSLOCG00000007491	rab18a	96	71.066	ENSCPBG00000027619	-	98	71.066	Chrysemys_picta_bellii
ENSLOCG00000007491	rab18a	100	92.233	ENSCPBG00000015839	-	100	92.233	Chrysemys_picta_bellii
ENSLOCG00000007491	rab18a	97	76.000	ENSCING00000006838	-	95	77.778	Ciona_intestinalis
ENSLOCG00000007491	rab18a	97	73.000	ENSCSAVG00000010348	-	95	75.132	Ciona_savignyi
ENSLOCG00000007491	rab18a	100	89.756	ENSCSEG00000011816	rab18a	100	89.756	Cynoglossus_semilaevis
ENSLOCG00000007491	rab18a	93	90.052	ENSCVAG00000015451	rab18a	100	89.268	Cyprinodon_variegatus
ENSLOCG00000007491	rab18a	100	82.927	ENSDARG00000055291	rab18a	100	82.927	Danio_rerio
ENSLOCG00000007491	rab18a	100	92.195	ENSELUG00000003805	rab18a	100	92.195	Esox_lucius
ENSLOCG00000007491	rab18a	93	89.529	ENSFHEG00000019455	rab18a	100	88.780	Fundulus_heteroclitus
ENSLOCG00000007491	rab18a	93	89.529	ENSGAFG00000002790	rab18a	100	88.293	Gambusia_affinis
ENSLOCG00000007491	rab18a	100	91.748	ENSGAGG00000015642	-	100	91.748	Gopherus_agassizii
ENSLOCG00000007491	rab18a	100	88.293	ENSHBUG00000001518	rab18a	100	88.293	Haplochromis_burtoni
ENSLOCG00000007491	rab18a	99	89.216	ENSLBEG00000005861	rab18a	95	89.216	Labrus_bergylta
ENSLOCG00000007491	rab18a	94	94.792	ENSLACG00000009310	rab18a	100	92.718	Latimeria_chalumnae
ENSLOCG00000007491	rab18a	100	89.268	ENSMAMG00000014320	rab18a	100	89.268	Mastacembelus_armatus
ENSLOCG00000007491	rab18a	100	87.805	ENSMZEG00005017235	rab18a	100	87.805	Maylandia_zebra
ENSLOCG00000007491	rab18a	100	90.244	ENSMALG00000009813	rab18a	100	90.244	Monopterus_albus
ENSLOCG00000007491	rab18a	100	88.293	ENSNBRG00000013507	rab18a	100	88.293	Neolamprologus_brichardi
ENSLOCG00000007491	rab18a	93	87.958	ENSORLG00000004624	rab18a	100	87.805	Oryzias_latipes
ENSLOCG00000007491	rab18a	93	88.482	ENSORLG00020008333	rab18a	100	88.293	Oryzias_latipes_hni
ENSLOCG00000007491	rab18a	93	87.958	ENSORLG00015004739	rab18a	100	87.805	Oryzias_latipes_hsok
ENSLOCG00000007491	rab18a	93	87.958	ENSOMEG00000020605	rab18a	100	87.805	Oryzias_melastigma
ENSLOCG00000007491	rab18a	100	90.244	ENSPKIG00000009825	rab18a	100	90.244	Paramormyrops_kingsleyae
ENSLOCG00000007491	rab18a	100	88.293	ENSPMGG00000020409	-	100	88.293	Periophthalmus_magnuspinnatus
ENSLOCG00000007491	rab18a	93	90.052	ENSPFOG00000007571	rab18a	100	88.780	Poecilia_formosa
ENSLOCG00000007491	rab18a	93	90.052	ENSPLAG00000010104	rab18a	100	88.780	Poecilia_latipinna
ENSLOCG00000007491	rab18a	93	90.052	ENSPMEG00000013085	rab18a	100	88.780	Poecilia_mexicana
ENSLOCG00000007491	rab18a	93	90.052	ENSPREG00000005923	rab18a	83	88.780	Poecilia_reticulata
ENSLOCG00000007491	rab18a	100	88.293	ENSPNYG00000007064	rab18a	100	88.293	Pundamilia_nyererei
ENSLOCG00000007491	rab18a	99	82.759	ENSPNAG00000011548	rab18a	95	85.789	Pygocentrus_nattereri
ENSLOCG00000007491	rab18a	100	93.659	ENSSFOG00015017444	rab18a	84	93.659	Scleropages_formosus
ENSLOCG00000007491	rab18a	93	90.104	ENSSMAG00000002969	rab18a	100	89.806	Scophthalmus_maximus
ENSLOCG00000007491	rab18a	93	90.576	ENSSDUG00000003823	rab18a	100	90.244	Seriola_dumerili
ENSLOCG00000007491	rab18a	93	90.576	ENSSLDG00000006977	rab18a	100	90.244	Seriola_lalandi_dorsalis
ENSLOCG00000007491	rab18a	94	94.792	ENSSPUG00000017677	-	100	92.718	Sphenodon_punctatus
ENSLOCG00000007491	rab18a	100	87.805	ENSTRUG00000004984	rab18a	100	87.805	Takifugu_rubripes
ENSLOCG00000007491	rab18a	100	91.262	ENSUMAG00000015574	-	100	91.262	Ursus_maritimus
ENSLOCG00000007491	rab18a	93	93.717	ENSXETG00000004556	rab18	93	93.717	Xenopus_tropicalis
ENSLOCG00000007491	rab18a	93	90.052	ENSXMAG00000024122	rab18a	100	88.780	Xiphophorus_maculatus