EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000007500 (Gene tree)
Gene ID: 102685734
Gene Symbol: raver1
Alias: zgc:112236
Full Name: ribonucleoprotein%2C PTB binding 1
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 13262 bases
Position: chrLG6:14980582-14993843
Accession: 102685734
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000009120	RRM_1	PF00076.22	1.2e-31	1	2
ENSLOCP00000009120	RRM_1	PF00076.22	1.2e-31	2	2
ENSLOCP00000009104	RRM_1	PF00076.22	1.5e-31	1	2
ENSLOCP00000009104	RRM_1	PF00076.22	1.5e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000009131	-	2477	XM_006631590	ENSLOCP00000009120	776 (aa)	XP_015204734	W5ML61
ENSLOCT00000009115	-	2579	XM_015349247	ENSLOCP00000009104	810 (aa)	XP_015204733	W5ML45

Gene Model

Click here to download ENSLOCG00000007500's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000007500's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000007500	raver1	94	42.601	ENSLOCG00000006773	raver2	96	41.608

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000007500	raver1	93	55.733	ENSG00000161847	RAVER1	96	56.410	Homo_sapiens
ENSLOCG00000007500	raver1	98	61.046	ENSAPOG00000017267	raver1	90	61.299	Acanthochromis_polyacanthus
ENSLOCG00000007500	raver1	92	53.324	ENSAMEG00000011738	RAVER1	94	54.122	Ailuropoda_melanoleuca
ENSLOCG00000007500	raver1	98	61.387	ENSAOCG00000005128	raver1	95	61.508	Amphiprion_ocellaris
ENSLOCG00000007500	raver1	90	73.418	ENSAPEG00000010854	raver1	97	73.418	Amphiprion_percula
ENSLOCG00000007500	raver1	97	60.523	ENSATEG00000021004	raver1	97	60.261	Anabas_testudineus
ENSLOCG00000007500	raver1	80	56.309	ENSACAG00000008386	-	91	56.154	Anolis_carolinensis
ENSLOCG00000007500	raver1	67	61.480	ENSANAG00000028226	RAVER1	95	55.867	Aotus_nancymaae
ENSLOCG00000007500	raver1	100	61.588	ENSACLG00000018492	raver1	98	59.428	Astatotilapia_calliptera
ENSLOCG00000007500	raver1	94	61.134	ENSAMXG00000005132	raver1	94	61.696	Astyanax_mexicanus
ENSLOCG00000007500	raver1	75	84.615	ENSBTAG00000015721	RAVER1	94	70.141	Bos_taurus
ENSLOCG00000007500	raver1	94	52.949	ENSCJAG00000005671	RAVER1	94	55.930	Callithrix_jacchus
ENSLOCG00000007500	raver1	92	55.158	ENSCAFG00000017861	RAVER1	94	56.181	Canis_familiaris
ENSLOCG00000007500	raver1	92	55.158	ENSCAFG00020024449	RAVER1	96	56.181	Canis_lupus_dingo
ENSLOCG00000007500	raver1	94	51.213	ENSCHIG00000006718	RAVER1	96	54.228	Capra_hircus
ENSLOCG00000007500	raver1	87	54.728	ENSCAPG00000002269	RAVER1	100	56.143	Cavia_aperea
ENSLOCG00000007500	raver1	94	54.868	ENSCPOG00000001008	RAVER1	96	56.393	Cavia_porcellus
ENSLOCG00000007500	raver1	94	53.273	ENSCCAG00000031723	RAVER1	95	55.674	Cebus_capucinus
ENSLOCG00000007500	raver1	93	55.467	ENSCATG00000043863	RAVER1	94	56.545	Cercocebus_atys
ENSLOCG00000007500	raver1	94	55.673	ENSCLAG00000009336	RAVER1	96	56.216	Chinchilla_lanigera
ENSLOCG00000007500	raver1	92	55.811	ENSCSAG00000007317	RAVER1	80	56.545	Chlorocebus_sabaeus
ENSLOCG00000007500	raver1	94	59.021	ENSCPBG00000005349	-	96	58.191	Chrysemys_picta_bellii
ENSLOCG00000007500	raver1	92	55.811	ENSCANG00000008337	RAVER1	94	56.545	Colobus_angolensis_palliatus
ENSLOCG00000007500	raver1	92	54.643	ENSCGRG00001013260	-	96	56.124	Cricetulus_griseus_chok1gshd
ENSLOCG00000007500	raver1	92	54.643	ENSCGRG00000015138	-	96	56.124	Cricetulus_griseus_crigri
ENSLOCG00000007500	raver1	98	58.301	ENSCSEG00000021092	raver1	92	59.918	Cynoglossus_semilaevis
ENSLOCG00000007500	raver1	100	59.898	ENSCVAG00000013971	raver1	98	60.000	Cyprinodon_variegatus
ENSLOCG00000007500	raver1	98	60.471	ENSDARG00000052617	raver1	98	60.392	Danio_rerio
ENSLOCG00000007500	raver1	53	65.347	ENSDNOG00000035742	-	64	60.393	Dasypus_novemcinctus
ENSLOCG00000007500	raver1	94	50.590	ENSDORG00000010106	-	96	50.256	Dipodomys_ordii
ENSLOCG00000007500	raver1	58	51.969	ENSETEG00000008201	-	85	49.880	Echinops_telfairi
ENSLOCG00000007500	raver1	83	60.348	ENSECAG00000024966	RAVER1	94	55.451	Equus_caballus
ENSLOCG00000007500	raver1	98	62.419	ENSELUG00000023287	raver1	98	62.029	Esox_lucius
ENSLOCG00000007500	raver1	92	53.774	ENSFCAG00000009435	RAVER1	94	55.316	Felis_catus
ENSLOCG00000007500	raver1	92	54.717	ENSFDAG00000015113	RAVER1	96	55.228	Fukomys_damarensis
ENSLOCG00000007500	raver1	94	57.923	ENSGMOG00000003649	raver1	97	58.713	Gadus_morhua
ENSLOCG00000007500	raver1	66	40.655	ENSGALG00000050608	-	51	40.655	Gallus_gallus
ENSLOCG00000007500	raver1	100	59.566	ENSGAFG00000015944	raver1	98	59.533	Gambusia_affinis
ENSLOCG00000007500	raver1	94	54.663	ENSGACG00000013818	raver1	85	65.116	Gasterosteus_aculeatus
ENSLOCG00000007500	raver1	92	58.847	ENSGAGG00000011748	-	96	69.474	Gopherus_agassizii
ENSLOCG00000007500	raver1	93	55.733	ENSGGOG00000006015	RAVER1	94	56.410	Gorilla_gorilla
ENSLOCG00000007500	raver1	99	61.340	ENSHBUG00000021210	raver1	98	59.428	Haplochromis_burtoni
ENSLOCG00000007500	raver1	92	55.616	ENSHGLG00000015460	RAVER1	97	54.714	Heterocephalus_glaber_female
ENSLOCG00000007500	raver1	92	55.616	ENSHGLG00100000812	RAVER1	97	54.714	Heterocephalus_glaber_male
ENSLOCG00000007500	raver1	100	59.466	ENSHCOG00000000449	raver1	90	61.633	Hippocampus_comes
ENSLOCG00000007500	raver1	98	59.558	ENSIPUG00000013153	raver1	92	62.207	Ictalurus_punctatus
ENSLOCG00000007500	raver1	94	53.403	ENSSTOG00000003241	RAVER1	96	55.302	Ictidomys_tridecemlineatus
ENSLOCG00000007500	raver1	92	55.705	ENSJJAG00000018219	-	96	55.839	Jaculus_jaculus
ENSLOCG00000007500	raver1	100	60.229	ENSKMAG00000017355	raver1	96	61.082	Kryptolebias_marmoratus
ENSLOCG00000007500	raver1	92	59.583	ENSLBEG00000008268	raver1	94	59.406	Labrus_bergylta
ENSLOCG00000007500	raver1	87	56.999	ENSLACG00000005809	-	99	57.349	Latimeria_chalumnae
ENSLOCG00000007500	raver1	94	54.040	ENSLAFG00000003664	-	100	55.986	Loxodonta_africana
ENSLOCG00000007500	raver1	92	55.676	ENSMFAG00000037977	RAVER1	94	56.545	Macaca_fascicularis
ENSLOCG00000007500	raver1	92	55.676	ENSMMUG00000014897	RAVER1	94	56.545	Macaca_mulatta
ENSLOCG00000007500	raver1	92	55.676	ENSMNEG00000028390	RAVER1	94	56.545	Macaca_nemestrina
ENSLOCG00000007500	raver1	93	55.467	ENSMLEG00000041959	RAVER1	94	56.545	Mandrillus_leucophaeus
ENSLOCG00000007500	raver1	96	62.216	ENSMAMG00000012059	raver1	96	61.682	Mastacembelus_armatus
ENSLOCG00000007500	raver1	100	61.588	ENSMZEG00005019002	raver1	98	61.578	Maylandia_zebra
ENSLOCG00000007500	raver1	92	55.645	ENSMAUG00000017948	-	96	56.091	Mesocricetus_auratus
ENSLOCG00000007500	raver1	93	56.121	ENSMICG00000010326	RAVER1	97	56.790	Microcebus_murinus
ENSLOCG00000007500	raver1	92	55.316	ENSMOCG00000015553	-	96	55.989	Microtus_ochrogaster
ENSLOCG00000007500	raver1	96	61.968	ENSMMOG00000012093	raver1	96	61.968	Mola_mola
ENSLOCG00000007500	raver1	90	55.634	ENSMODG00000005584	-	85	56.017	Monodelphis_domestica
ENSLOCG00000007500	raver1	100	58.493	ENSMALG00000016569	raver1	98	59.610	Monopterus_albus
ENSLOCG00000007500	raver1	92	54.570	MGP_CAROLIEiJ_G0031860	-	96	55.968	Mus_caroli
ENSLOCG00000007500	raver1	92	54.437	ENSMUSG00000010205	Raver1	96	55.836	Mus_musculus
ENSLOCG00000007500	raver1	92	53.755	MGP_PahariEiJ_G0014726	-	96	55.937	Mus_pahari
ENSLOCG00000007500	raver1	92	54.437	MGP_SPRETEiJ_G0032984	-	96	55.836	Mus_spretus
ENSLOCG00000007500	raver1	92	54.533	ENSMPUG00000006712	RAVER1	94	55.660	Mustela_putorius_furo
ENSLOCG00000007500	raver1	92	55.082	ENSMLUG00000012328	RAVER1	96	56.421	Myotis_lucifugus
ENSLOCG00000007500	raver1	92	53.028	ENSNGAG00000001260	-	96	52.490	Nannospalax_galili
ENSLOCG00000007500	raver1	100	54.777	ENSNBRG00000010139	raver1	98	55.212	Neolamprologus_brichardi
ENSLOCG00000007500	raver1	93	55.200	ENSNLEG00000012181	RAVER1	94	56.005	Nomascus_leucogenys
ENSLOCG00000007500	raver1	86	55.378	ENSMEUG00000003281	-	100	55.378	Notamacropus_eugenii
ENSLOCG00000007500	raver1	75	84.615	ENSODEG00000016260	RAVER1	96	53.826	Octodon_degus
ENSLOCG00000007500	raver1	93	61.180	ENSONIG00000001559	raver1	95	69.595	Oreochromis_niloticus
ENSLOCG00000007500	raver1	94	51.262	ENSOCUG00000020918	RAVER1	96	51.682	Oryctolagus_cuniculus
ENSLOCG00000007500	raver1	100	59.387	ENSORLG00000005458	raver1	97	60.158	Oryzias_latipes
ENSLOCG00000007500	raver1	100	59.515	ENSORLG00020004392	raver1	97	60.158	Oryzias_latipes_hni
ENSLOCG00000007500	raver1	100	59.642	ENSORLG00015017222	raver1	97	60.290	Oryzias_latipes_hsok
ENSLOCG00000007500	raver1	93	89.796	ENSOMEG00000023956	raver1	96	84.906	Oryzias_melastigma
ENSLOCG00000007500	raver1	93	54.061	ENSOGAG00000011071	RAVER1	95	55.407	Otolemur_garnettii
ENSLOCG00000007500	raver1	94	49.612	ENSOARG00000015886	RAVER1	94	52.022	Ovis_aries
ENSLOCG00000007500	raver1	93	55.733	ENSPPAG00000002611	RAVER1	94	56.410	Pan_paniscus
ENSLOCG00000007500	raver1	92	54.447	ENSPPRG00000009912	RAVER1	94	55.451	Panthera_pardus
ENSLOCG00000007500	raver1	93	55.733	ENSPTRG00000010466	RAVER1	94	56.410	Pan_troglodytes
ENSLOCG00000007500	raver1	93	55.159	ENSPANG00000004122	RAVER1	94	56.410	Papio_anubis
ENSLOCG00000007500	raver1	92	53.359	ENSPEMG00000016411	-	96	56.107	Peromyscus_maniculatus_bairdii
ENSLOCG00000007500	raver1	94	56.124	ENSPCIG00000018695	-	96	57.222	Phascolarctos_cinereus
ENSLOCG00000007500	raver1	100	59.219	ENSPFOG00000007016	raver1	92	61.757	Poecilia_formosa
ENSLOCG00000007500	raver1	100	56.929	ENSPLAG00000020793	raver1	91	60.492	Poecilia_latipinna
ENSLOCG00000007500	raver1	100	60.406	ENSPMEG00000011220	raver1	92	62.244	Poecilia_mexicana
ENSLOCG00000007500	raver1	100	57.727	ENSPREG00000006864	raver1	98	57.662	Poecilia_reticulata
ENSLOCG00000007500	raver1	93	54.899	ENSPPYG00000010514	RAVER1	81	55.200	Pongo_abelii
ENSLOCG00000007500	raver1	93	53.989	ENSPCOG00000026605	RAVER1	94	55.256	Propithecus_coquereli
ENSLOCG00000007500	raver1	92	55.163	ENSPVAG00000003689	RAVER1	96	55.989	Pteropus_vampyrus
ENSLOCG00000007500	raver1	100	57.746	ENSPNYG00000013284	raver1	98	58.257	Pundamilia_nyererei
ENSLOCG00000007500	raver1	98	60.925	ENSPNAG00000015476	raver1	98	60.925	Pygocentrus_nattereri
ENSLOCG00000007500	raver1	92	54.122	ENSRNOG00000020710	Raver1	96	56.233	Rattus_norvegicus
ENSLOCG00000007500	raver1	93	56.054	ENSRBIG00000034702	RAVER1	95	56.617	Rhinopithecus_bieti
ENSLOCG00000007500	raver1	93	56.190	ENSRROG00000031186	RAVER1	95	56.480	Rhinopithecus_roxellana
ENSLOCG00000007500	raver1	93	55.495	ENSSBOG00000023423	RAVER1	95	56.498	Saimiri_boliviensis_boliviensis
ENSLOCG00000007500	raver1	87	56.848	ENSSHAG00000008181	-	90	56.996	Sarcophilus_harrisii
ENSLOCG00000007500	raver1	98	60.000	ENSSMAG00000004546	raver1	98	60.700	Scophthalmus_maximus
ENSLOCG00000007500	raver1	96	63.067	ENSSDUG00000021063	raver1	96	63.046	Seriola_dumerili
ENSLOCG00000007500	raver1	96	63.200	ENSSLDG00000014505	raver1	96	63.179	Seriola_lalandi_dorsalis
ENSLOCG00000007500	raver1	98	61.638	ENSSPAG00000000688	raver1	98	62.435	Stegastes_partitus
ENSLOCG00000007500	raver1	94	54.398	ENSSSCG00000013650	-	96	55.890	Sus_scrofa
ENSLOCG00000007500	raver1	97	58.747	ENSTRUG00000025641	raver1	92	60.744	Takifugu_rubripes
ENSLOCG00000007500	raver1	93	54.412	ENSTTRG00000009552	RAVER1	96	56.292	Tursiops_truncatus
ENSLOCG00000007500	raver1	92	54.913	ENSUAMG00000020385	RAVER1	94	55.720	Ursus_americanus
ENSLOCG00000007500	raver1	92	55.296	ENSVVUG00000028976	RAVER1	94	56.319	Vulpes_vulpes
ENSLOCG00000007500	raver1	100	51.711	ENSXETG00000011622	raver1	95	53.709	Xenopus_tropicalis
ENSLOCG00000007500	raver1	100	60.102	ENSXCOG00000016368	raver1	98	60.078	Xiphophorus_couchianus
ENSLOCG00000007500	raver1	100	60.102	ENSXMAG00000000217	raver1	98	60.078	Xiphophorus_maculatus