EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLOCG00000007566 (Gene tree)
Gene ID: 102690442
Gene Symbol: sf3b3
Alias: ik:tdsubc_2b2|wu:fb81f05|xx:tdsubc_2b2|zgc:55440
Full Name: splicing factor 3b subunit 3
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 23730 bases
Position: chrLG23:15808583-15832312
Accession: 102690442
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000009184	CPSF_A	PF03178.15	5.9e-100	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000009195	-	7648	XM_006641418	ENSLOCP00000009184	1218 (aa)	XP_006641481	W5MLC5

Gene Model

Click here to download ENSLOCG00000007566's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000007566's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000007566	sf3b3	100	94.089	ENSG00000189091	SF3B3	100	100.000	Homo_sapiens
ENSLOCG00000007566	sf3b3	96	96.416	ENSAPOG00000006172	sf3b3	98	96.416	Acanthochromis_polyacanthus
ENSLOCG00000007566	sf3b3	100	93.939	ENSAMEG00000002187	SF3B3	100	93.939	Ailuropoda_melanoleuca
ENSLOCG00000007566	sf3b3	92	93.934	ENSACIG00000016487	sf3b3	100	93.934	Amphilophus_citrinellus
ENSLOCG00000007566	sf3b3	100	96.305	ENSAOCG00000007158	sf3b3	100	96.305	Amphiprion_ocellaris
ENSLOCG00000007566	sf3b3	100	96.305	ENSAPEG00000022786	sf3b3	100	96.305	Amphiprion_percula
ENSLOCG00000007566	sf3b3	100	97.044	ENSATEG00000013708	sf3b3	100	97.044	Anabas_testudineus
ENSLOCG00000007566	sf3b3	81	93.706	ENSAPLG00000004996	SF3B3	99	93.706	Anas_platyrhynchos
ENSLOCG00000007566	sf3b3	100	94.171	ENSACAG00000001817	SF3B3	100	94.171	Anolis_carolinensis
ENSLOCG00000007566	sf3b3	100	94.089	ENSANAG00000028001	SF3B3	100	94.089	Aotus_nancymaae
ENSLOCG00000007566	sf3b3	96	96.587	ENSACLG00000022555	sf3b3	98	96.587	Astatotilapia_calliptera
ENSLOCG00000007566	sf3b3	100	97.126	ENSAMXG00000003410	sf3b3	100	97.126	Astyanax_mexicanus
ENSLOCG00000007566	sf3b3	100	94.089	ENSBTAG00000010627	SF3B3	100	94.089	Bos_taurus
ENSLOCG00000007566	sf3b3	100	60.130	WBGene00019323	teg-4	100	60.130	Caenorhabditis_elegans
ENSLOCG00000007566	sf3b3	100	94.089	ENSCJAG00000014773	SF3B3	99	94.089	Callithrix_jacchus
ENSLOCG00000007566	sf3b3	100	94.171	ENSCAFG00000020151	SF3B3	100	94.171	Canis_familiaris
ENSLOCG00000007566	sf3b3	100	94.171	ENSCAFG00020020912	SF3B3	100	94.171	Canis_lupus_dingo
ENSLOCG00000007566	sf3b3	100	94.171	ENSCHIG00000019822	SF3B3	100	94.171	Capra_hircus
ENSLOCG00000007566	sf3b3	100	94.089	ENSTSYG00000007910	SF3B3	100	94.089	Carlito_syrichta
ENSLOCG00000007566	sf3b3	84	80.320	ENSCAPG00000001484	SF3B3	92	80.320	Cavia_aperea
ENSLOCG00000007566	sf3b3	100	92.775	ENSCPOG00000000586	SF3B3	100	92.775	Cavia_porcellus
ENSLOCG00000007566	sf3b3	100	94.089	ENSCCAG00000017736	SF3B3	100	94.089	Cebus_capucinus
ENSLOCG00000007566	sf3b3	100	94.089	ENSCATG00000036562	SF3B3	100	94.089	Cercocebus_atys
ENSLOCG00000007566	sf3b3	100	94.089	ENSCLAG00000003921	SF3B3	100	94.089	Chinchilla_lanigera
ENSLOCG00000007566	sf3b3	100	94.089	ENSCSAG00000004371	SF3B3	100	94.089	Chlorocebus_sabaeus
ENSLOCG00000007566	sf3b3	90	90.654	ENSCHOG00000001878	SF3B3	90	90.654	Choloepus_hoffmanni
ENSLOCG00000007566	sf3b3	100	94.007	ENSCPBG00000015853	SF3B3	100	94.007	Chrysemys_picta_bellii
ENSLOCG00000007566	sf3b3	100	79.984	ENSCING00000001342	-	100	79.984	Ciona_intestinalis
ENSLOCG00000007566	sf3b3	99	78.753	ENSCSAVG00000011454	-	100	78.753	Ciona_savignyi
ENSLOCG00000007566	sf3b3	100	90.476	ENSCANG00000042920	SF3B3	100	90.969	Colobus_angolensis_palliatus
ENSLOCG00000007566	sf3b3	100	94.007	ENSCGRG00001015908	Sf3b3	100	94.007	Cricetulus_griseus_chok1gshd
ENSLOCG00000007566	sf3b3	100	94.007	ENSCGRG00000010180	Sf3b3	100	94.007	Cricetulus_griseus_crigri
ENSLOCG00000007566	sf3b3	82	95.115	ENSCSEG00000014192	sf3b3	99	95.115	Cynoglossus_semilaevis
ENSLOCG00000007566	sf3b3	100	96.223	ENSCVAG00000010459	sf3b3	100	96.223	Cyprinodon_variegatus
ENSLOCG00000007566	sf3b3	100	96.141	ENSDARG00000103553	sf3b3	100	96.141	Danio_rerio
ENSLOCG00000007566	sf3b3	85	93.642	ENSDNOG00000043626	SF3B3	100	93.642	Dasypus_novemcinctus
ENSLOCG00000007566	sf3b3	100	94.089	ENSDORG00000014176	Sf3b3	100	94.089	Dipodomys_ordii
ENSLOCG00000007566	sf3b3	100	75.326	FBgn0035162	Sf3b3	100	75.326	Drosophila_melanogaster
ENSLOCG00000007566	sf3b3	84	97.046	ENSETEG00000002729	SF3B3	84	97.046	Echinops_telfairi
ENSLOCG00000007566	sf3b3	100	86.207	ENSEBUG00000006117	sf3b3	100	86.207	Eptatretus_burgeri
ENSLOCG00000007566	sf3b3	100	94.171	ENSEASG00005013376	SF3B3	100	94.171	Equus_asinus_asinus
ENSLOCG00000007566	sf3b3	100	94.171	ENSECAG00000014053	SF3B3	100	94.171	Equus_caballus
ENSLOCG00000007566	sf3b3	93	93.870	ENSEEUG00000015611	SF3B3	93	93.870	Erinaceus_europaeus
ENSLOCG00000007566	sf3b3	100	95.250	ENSELUG00000015417	sf3b3	100	95.250	Esox_lucius
ENSLOCG00000007566	sf3b3	100	94.171	ENSFCAG00000009487	SF3B3	100	94.171	Felis_catus
ENSLOCG00000007566	sf3b3	100	93.514	ENSFALG00000007372	SF3B3	100	93.514	Ficedula_albicollis
ENSLOCG00000007566	sf3b3	100	94.089	ENSFDAG00000002608	SF3B3	100	94.089	Fukomys_damarensis
ENSLOCG00000007566	sf3b3	100	96.634	ENSFHEG00000017824	sf3b3	100	96.634	Fundulus_heteroclitus
ENSLOCG00000007566	sf3b3	100	92.529	ENSGMOG00000008139	sf3b3	100	92.529	Gadus_morhua
ENSLOCG00000007566	sf3b3	100	93.760	ENSGALG00000002531	SF3B3	100	93.760	Gallus_gallus
ENSLOCG00000007566	sf3b3	100	96.388	ENSGAFG00000015206	sf3b3	100	96.388	Gambusia_affinis
ENSLOCG00000007566	sf3b3	100	96.552	ENSGACG00000002646	sf3b3	100	96.552	Gasterosteus_aculeatus
ENSLOCG00000007566	sf3b3	96	94.027	ENSGAGG00000006746	SF3B3	97	94.027	Gopherus_agassizii
ENSLOCG00000007566	sf3b3	100	94.089	ENSGGOG00000003246	SF3B3	100	94.089	Gorilla_gorilla
ENSLOCG00000007566	sf3b3	92	88.760	ENSHBUG00000005960	sf3b3	100	89.741	Haplochromis_burtoni
ENSLOCG00000007566	sf3b3	100	94.089	ENSHGLG00000010135	SF3B3	100	94.089	Heterocephalus_glaber_female
ENSLOCG00000007566	sf3b3	100	91.977	ENSHGLG00100011148	SF3B3	100	91.977	Heterocephalus_glaber_male
ENSLOCG00000007566	sf3b3	100	96.141	ENSHCOG00000011981	sf3b3	100	96.141	Hippocampus_comes
ENSLOCG00000007566	sf3b3	100	97.044	ENSIPUG00000020435	sf3b3	100	97.044	Ictalurus_punctatus
ENSLOCG00000007566	sf3b3	100	94.089	ENSSTOG00000007065	SF3B3	100	94.089	Ictidomys_tridecemlineatus
ENSLOCG00000007566	sf3b3	100	94.089	ENSJJAG00000003948	Sf3b3	100	94.089	Jaculus_jaculus
ENSLOCG00000007566	sf3b3	100	94.335	ENSKMAG00000004066	sf3b3	99	96.502	Kryptolebias_marmoratus
ENSLOCG00000007566	sf3b3	100	96.552	ENSLBEG00000018302	sf3b3	100	96.552	Labrus_bergylta
ENSLOCG00000007566	sf3b3	98	90.532	ENSLACG00000012501	SF3B3	99	90.532	Latimeria_chalumnae
ENSLOCG00000007566	sf3b3	100	94.171	ENSLAFG00000012219	SF3B3	100	94.171	Loxodonta_africana
ENSLOCG00000007566	sf3b3	100	94.089	ENSMFAG00000045487	SF3B3	100	94.089	Macaca_fascicularis
ENSLOCG00000007566	sf3b3	100	94.089	ENSMMUG00000017812	SF3B3	100	94.089	Macaca_mulatta
ENSLOCG00000007566	sf3b3	100	94.089	ENSMNEG00000033385	SF3B3	100	94.089	Macaca_nemestrina
ENSLOCG00000007566	sf3b3	100	90.558	ENSMLEG00000043891	SF3B3	100	90.558	Mandrillus_leucophaeus
ENSLOCG00000007566	sf3b3	100	96.962	ENSMAMG00000016837	sf3b3	100	96.962	Mastacembelus_armatus
ENSLOCG00000007566	sf3b3	89	93.530	ENSMZEG00005026015	sf3b3	99	93.530	Maylandia_zebra
ENSLOCG00000007566	sf3b3	100	96.552	ENSMZEG00005010836	sf3b3	100	96.552	Maylandia_zebra
ENSLOCG00000007566	sf3b3	100	93.760	ENSMGAG00000001597	SF3B3	100	93.760	Meleagris_gallopavo
ENSLOCG00000007566	sf3b3	81	76.808	ENSMAUG00000013618	Sf3b3	95	77.182	Mesocricetus_auratus
ENSLOCG00000007566	sf3b3	100	93.033	ENSMICG00000001363	SF3B3	100	93.033	Microcebus_murinus
ENSLOCG00000007566	sf3b3	100	94.007	ENSMOCG00000006108	Sf3b3	100	94.007	Microtus_ochrogaster
ENSLOCG00000007566	sf3b3	89	93.900	ENSMMOG00000002598	sf3b3	97	93.900	Mola_mola
ENSLOCG00000007566	sf3b3	100	90.074	ENSMODG00000014363	SF3B3	100	90.074	Monodelphis_domestica
ENSLOCG00000007566	sf3b3	100	96.305	ENSMALG00000008014	sf3b3	100	96.305	Monopterus_albus
ENSLOCG00000007566	sf3b3	100	94.007	MGP_CAROLIEiJ_G0031563	Sf3b3	100	94.007	Mus_caroli
ENSLOCG00000007566	sf3b3	100	94.007	ENSMUSG00000033732	Sf3b3	100	94.007	Mus_musculus
ENSLOCG00000007566	sf3b3	100	93.924	MGP_SPRETEiJ_G0032681	Sf3b3	100	93.924	Mus_spretus
ENSLOCG00000007566	sf3b3	100	94.171	ENSMPUG00000010277	SF3B3	100	94.171	Mustela_putorius_furo
ENSLOCG00000007566	sf3b3	100	94.007	ENSMLUG00000014607	SF3B3	100	94.007	Myotis_lucifugus
ENSLOCG00000007566	sf3b3	100	94.089	ENSNGAG00000021903	Sf3b3	100	94.089	Nannospalax_galili
ENSLOCG00000007566	sf3b3	83	94.444	ENSNBRG00000007197	sf3b3	99	94.444	Neolamprologus_brichardi
ENSLOCG00000007566	sf3b3	100	92.617	ENSNLEG00000016127	SF3B3	100	92.617	Nomascus_leucogenys
ENSLOCG00000007566	sf3b3	92	89.826	ENSMEUG00000004479	SF3B3	94	89.826	Notamacropus_eugenii
ENSLOCG00000007566	sf3b3	98	90.871	ENSOPRG00000009847	SF3B3	100	90.871	Ochotona_princeps
ENSLOCG00000007566	sf3b3	100	94.089	ENSODEG00000014154	SF3B3	100	94.089	Octodon_degus
ENSLOCG00000007566	sf3b3	100	96.798	ENSONIG00000011198	sf3b3	100	96.798	Oreochromis_niloticus
ENSLOCG00000007566	sf3b3	100	94.253	ENSOANG00000001161	-	100	94.253	Ornithorhynchus_anatinus
ENSLOCG00000007566	sf3b3	100	92.036	ENSOCUG00000004139	SF3B3	100	92.036	Oryctolagus_cuniculus
ENSLOCG00000007566	sf3b3	100	96.305	ENSORLG00000013472	sf3b3	100	96.305	Oryzias_latipes
ENSLOCG00000007566	sf3b3	100	96.305	ENSORLG00020017473	sf3b3	100	96.305	Oryzias_latipes_hni
ENSLOCG00000007566	sf3b3	100	96.141	ENSORLG00015007710	sf3b3	100	96.141	Oryzias_latipes_hsok
ENSLOCG00000007566	sf3b3	100	96.141	ENSOMEG00000014483	sf3b3	100	96.141	Oryzias_melastigma
ENSLOCG00000007566	sf3b3	100	93.776	ENSOGAG00000016051	SF3B3	100	93.776	Otolemur_garnettii
ENSLOCG00000007566	sf3b3	100	93.939	ENSOARG00000004816	SF3B3	100	93.939	Ovis_aries
ENSLOCG00000007566	sf3b3	100	94.089	ENSPPAG00000026807	SF3B3	100	94.089	Pan_paniscus
ENSLOCG00000007566	sf3b3	100	94.171	ENSPPRG00000001686	SF3B3	100	94.171	Panthera_pardus
ENSLOCG00000007566	sf3b3	89	91.085	ENSPTIG00000020382	SF3B3	100	91.085	Panthera_tigris_altaica
ENSLOCG00000007566	sf3b3	100	94.089	ENSPTRG00000008308	SF3B3	100	94.089	Pan_troglodytes
ENSLOCG00000007566	sf3b3	100	94.089	ENSPANG00000024075	SF3B3	100	94.089	Papio_anubis
ENSLOCG00000007566	sf3b3	100	96.798	ENSPKIG00000002712	sf3b3	100	96.798	Paramormyrops_kingsleyae
ENSLOCG00000007566	sf3b3	89	94.118	ENSPSIG00000002232	SF3B3	100	94.118	Pelodiscus_sinensis
ENSLOCG00000007566	sf3b3	100	94.007	ENSPEMG00000008603	Sf3b3	100	94.007	Peromyscus_maniculatus_bairdii
ENSLOCG00000007566	sf3b3	100	91.461	ENSPMAG00000001793	sf3b3	100	91.461	Petromyzon_marinus
ENSLOCG00000007566	sf3b3	100	94.253	ENSPCIG00000014927	SF3B3	100	94.253	Phascolarctos_cinereus
ENSLOCG00000007566	sf3b3	100	96.470	ENSPFOG00000015516	sf3b3	100	96.470	Poecilia_formosa
ENSLOCG00000007566	sf3b3	100	96.470	ENSPLAG00000014330	sf3b3	100	96.470	Poecilia_latipinna
ENSLOCG00000007566	sf3b3	100	96.552	ENSPMEG00000019856	sf3b3	100	96.552	Poecilia_mexicana
ENSLOCG00000007566	sf3b3	81	96.751	ENSPREG00000019669	sf3b3	97	96.751	Poecilia_reticulata
ENSLOCG00000007566	sf3b3	95	95.522	ENSPPYG00000007539	SF3B3	100	95.522	Pongo_abelii
ENSLOCG00000007566	sf3b3	100	73.481	ENSPCAG00000002623	SF3B3	100	73.481	Procavia_capensis
ENSLOCG00000007566	sf3b3	84	96.296	ENSPCOG00000026582	SF3B3	100	96.296	Propithecus_coquereli
ENSLOCG00000007566	sf3b3	100	94.089	ENSPVAG00000000684	SF3B3	100	94.089	Pteropus_vampyrus
ENSLOCG00000007566	sf3b3	100	96.634	ENSPNYG00000003528	sf3b3	100	96.634	Pundamilia_nyererei
ENSLOCG00000007566	sf3b3	100	97.044	ENSPNAG00000015419	sf3b3	100	97.044	Pygocentrus_nattereri
ENSLOCG00000007566	sf3b3	100	94.007	ENSRNOG00000017724	Sf3b3	100	94.007	Rattus_norvegicus
ENSLOCG00000007566	sf3b3	100	94.089	ENSRBIG00000021904	SF3B3	100	94.089	Rhinopithecus_bieti
ENSLOCG00000007566	sf3b3	100	94.089	ENSRROG00000045703	SF3B3	100	94.089	Rhinopithecus_roxellana
ENSLOCG00000007566	sf3b3	100	94.089	ENSSBOG00000029156	SF3B3	100	94.089	Saimiri_boliviensis_boliviensis
ENSLOCG00000007566	sf3b3	100	94.253	ENSSHAG00000000372	SF3B3	100	94.253	Sarcophilus_harrisii
ENSLOCG00000007566	sf3b3	100	97.701	ENSSFOG00015012877	sf3b3	100	97.701	Scleropages_formosus
ENSLOCG00000007566	sf3b3	100	95.977	ENSSMAG00000014386	sf3b3	100	95.977	Scophthalmus_maximus
ENSLOCG00000007566	sf3b3	100	96.962	ENSSDUG00000021201	sf3b3	100	96.962	Seriola_dumerili
ENSLOCG00000007566	sf3b3	100	96.880	ENSSLDG00000017532	sf3b3	100	96.880	Seriola_lalandi_dorsalis
ENSLOCG00000007566	sf3b3	93	95.652	ENSSARG00000006917	SF3B3	93	95.652	Sorex_araneus
ENSLOCG00000007566	sf3b3	100	93.924	ENSSPUG00000006253	SF3B3	100	93.924	Sphenodon_punctatus
ENSLOCG00000007566	sf3b3	100	88.998	ENSSPAG00000003125	sf3b3	100	88.998	Stegastes_partitus
ENSLOCG00000007566	sf3b3	100	94.171	ENSSSCG00000025323	SF3B3	100	94.171	Sus_scrofa
ENSLOCG00000007566	sf3b3	100	93.683	ENSTGUG00000006082	SF3B3	100	93.683	Taeniopygia_guttata
ENSLOCG00000007566	sf3b3	89	96.786	ENSTNIG00000004857	sf3b3	100	96.786	Tetraodon_nigroviridis
ENSLOCG00000007566	sf3b3	93	79.683	ENSTBEG00000002946	SF3B3	100	79.683	Tupaia_belangeri
ENSLOCG00000007566	sf3b3	100	93.350	ENSTTRG00000005855	SF3B3	100	93.350	Tursiops_truncatus
ENSLOCG00000007566	sf3b3	100	94.171	ENSUAMG00000006780	SF3B3	100	94.171	Ursus_americanus
ENSLOCG00000007566	sf3b3	100	94.171	ENSUMAG00000017757	SF3B3	100	94.171	Ursus_maritimus
ENSLOCG00000007566	sf3b3	100	79.146	ENSVPAG00000003202	SF3B3	100	79.146	Vicugna_pacos
ENSLOCG00000007566	sf3b3	100	94.171	ENSVVUG00000017922	SF3B3	100	94.171	Vulpes_vulpes
ENSLOCG00000007566	sf3b3	100	93.432	ENSXETG00000032869	SF3B3	100	93.432	Xenopus_tropicalis
ENSLOCG00000007566	sf3b3	77	97.243	ENSXCOG00000013628	sf3b3	97	97.243	Xiphophorus_couchianus
ENSLOCG00000007566	sf3b3	100	96.470	ENSXMAG00000006334	sf3b3	100	96.470	Xiphophorus_maculatus