EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000007647 (Gene tree)
Gene ID: 102698621
Gene Symbol: elavl3
Alias: elav-related C|elavC|elrc|etID309927.3|huc|id:ibd1248|wu:fb77b03|zHuC
Full Name: ELAV like RNA binding protein 3
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 38396 bases
Position: chrLG6:15555433-15593828
Accession: 102698621
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000009275	RRM_5	PF13893.6	1.1e-12	1	2
ENSLOCP00000009275	RRM_5	PF13893.6	1.1e-12	2	2
ENSLOCP00000009275	RRM_1	PF00076.22	1.5e-64	1	3
ENSLOCP00000009275	RRM_1	PF00076.22	1.5e-64	2	3
ENSLOCP00000009275	RRM_1	PF00076.22	1.5e-64	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000009286	-	1677	XM_006631484	ENSLOCP00000009275	365 (aa)	XP_006631548	W5MLL6

Gene Model

Click here to download ENSLOCG00000007647's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000007647's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000007647	elavl3	92	38.462	ENSLOCG00000011405	tial1	65	38.462
ENSLOCG00000007647	elavl3	90	37.179	ENSLOCG00000015324	tia1l	71	37.179
ENSLOCG00000007647	elavl3	91	69.277	ENSLOCG00000000284	elavl1b	92	69.277
ENSLOCG00000007647	elavl3	99	81.622	ENSLOCG00000012575	ELAVL2	94	81.622
ENSLOCG00000007647	elavl3	85	35.200	ENSLOCG00000015690	celf2	63	35.200
ENSLOCG00000007647	elavl3	74	42.553	ENSLOCG00000005966	celf1	64	42.553
ENSLOCG00000007647	elavl3	60	36.486	ENSLOCG00000005031	-	95	36.486
ENSLOCG00000007647	elavl3	90	36.145	ENSLOCG00000007519	pabpc1l	62	36.145
ENSLOCG00000007647	elavl3	88	36.585	ENSLOCG00000005481	celf5a	99	36.585
ENSLOCG00000007647	elavl3	74	40.698	ENSLOCG00000015141	si:dkey-205h23.2	54	40.698
ENSLOCG00000007647	elavl3	90	37.349	ENSLOCG00000009681	PABPC1	58	37.349
ENSLOCG00000007647	elavl3	99	84.097	ENSLOCG00000009363	elavl4	89	84.097

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000007647	elavl3	100	88.011	ENSG00000196361	ELAVL3	100	89.101	Homo_sapiens
ENSLOCG00000007647	elavl3	99	93.094	ENSAPOG00000017565	elavl3	99	93.094	Acanthochromis_polyacanthus
ENSLOCG00000007647	elavl3	99	85.440	ENSAMEG00000010487	ELAVL3	99	86.538	Ailuropoda_melanoleuca
ENSLOCG00000007647	elavl3	99	93.094	ENSACIG00000024190	elavl3	99	93.094	Amphilophus_citrinellus
ENSLOCG00000007647	elavl3	100	96.438	ENSAOCG00000005054	elavl3	100	96.438	Amphiprion_ocellaris
ENSLOCG00000007647	elavl3	100	96.438	ENSAPEG00000011145	elavl3	100	96.438	Amphiprion_percula
ENSLOCG00000007647	elavl3	98	93.036	ENSATEG00000020941	elavl3	99	93.036	Anabas_testudineus
ENSLOCG00000007647	elavl3	98	93.611	ENSACAG00000016958	ELAVL3	93	93.611	Anolis_carolinensis
ENSLOCG00000007647	elavl3	100	87.432	ENSANAG00000030798	ELAVL3	100	88.525	Aotus_nancymaae
ENSLOCG00000007647	elavl3	100	92.877	ENSACLG00000018260	elavl3	100	92.877	Astatotilapia_calliptera
ENSLOCG00000007647	elavl3	100	97.808	ENSAMXG00000040498	elavl3	100	97.808	Astyanax_mexicanus
ENSLOCG00000007647	elavl3	100	87.466	ENSBTAG00000014412	ELAVL3	100	88.556	Bos_taurus
ENSLOCG00000007647	elavl3	100	88.011	ENSCJAG00000005589	ELAVL3	100	89.101	Callithrix_jacchus
ENSLOCG00000007647	elavl3	100	88.011	ENSCAFG00000017350	ELAVL3	100	89.101	Canis_familiaris
ENSLOCG00000007647	elavl3	100	86.413	ENSCAFG00020004614	ELAVL3	99	88.859	Canis_lupus_dingo
ENSLOCG00000007647	elavl3	99	88.430	ENSCHIG00000003436	ELAVL3	99	89.532	Capra_hircus
ENSLOCG00000007647	elavl3	99	88.154	ENSTSYG00000036621	ELAVL3	99	89.256	Carlito_syrichta
ENSLOCG00000007647	elavl3	90	75.926	ENSCAPG00000017620	ELAVL3	99	77.160	Cavia_aperea
ENSLOCG00000007647	elavl3	90	75.926	ENSCPOG00000001793	ELAVL3	99	77.160	Cavia_porcellus
ENSLOCG00000007647	elavl3	100	88.011	ENSCCAG00000034350	ELAVL3	100	89.101	Cebus_capucinus
ENSLOCG00000007647	elavl3	100	88.011	ENSCATG00000044086	ELAVL3	100	89.101	Cercocebus_atys
ENSLOCG00000007647	elavl3	100	87.738	ENSCLAG00000016404	ELAVL3	100	88.828	Chinchilla_lanigera
ENSLOCG00000007647	elavl3	96	90.870	ENSCSAG00000006755	ELAVL3	100	90.870	Chlorocebus_sabaeus
ENSLOCG00000007647	elavl3	100	91.281	ENSCPBG00000023982	ELAVL3	100	91.281	Chrysemys_picta_bellii
ENSLOCG00000007647	elavl3	100	88.011	ENSCANG00000038728	ELAVL3	100	89.101	Colobus_angolensis_palliatus
ENSLOCG00000007647	elavl3	100	87.466	ENSCGRG00001018927	Elavl3	100	88.556	Cricetulus_griseus_chok1gshd
ENSLOCG00000007647	elavl3	99	87.603	ENSCGRG00000007158	Elavl3	99	88.705	Cricetulus_griseus_crigri
ENSLOCG00000007647	elavl3	100	92.055	ENSCSEG00000021095	elavl3	100	92.055	Cynoglossus_semilaevis
ENSLOCG00000007647	elavl3	100	96.438	ENSCVAG00000014060	elavl3	100	96.438	Cyprinodon_variegatus
ENSLOCG00000007647	elavl3	100	96.164	ENSDARG00000014420	elavl3	100	96.164	Danio_rerio
ENSLOCG00000007647	elavl3	99	87.052	ENSDORG00000002538	Elavl3	99	88.154	Dipodomys_ordii
ENSLOCG00000007647	elavl3	51	97.059	ENSETEG00000000164	-	57	97.059	Echinops_telfairi
ENSLOCG00000007647	elavl3	100	88.011	ENSEASG00005004561	ELAVL3	100	89.101	Equus_asinus_asinus
ENSLOCG00000007647	elavl3	100	87.738	ENSECAG00000020594	ELAVL3	99	89.960	Equus_caballus
ENSLOCG00000007647	elavl3	100	93.716	ENSELUG00000023043	elavl3	100	93.716	Esox_lucius
ENSLOCG00000007647	elavl3	100	88.011	ENSFCAG00000024763	ELAVL3	100	89.101	Felis_catus
ENSLOCG00000007647	elavl3	100	81.421	ENSFDAG00000008449	ELAVL3	100	81.421	Fukomys_damarensis
ENSLOCG00000007647	elavl3	100	92.877	ENSFHEG00000001675	elavl3	100	92.877	Fundulus_heteroclitus
ENSLOCG00000007647	elavl3	100	96.164	ENSGMOG00000003760	elavl3	100	96.164	Gadus_morhua
ENSLOCG00000007647	elavl3	55	77.165	ENSGALG00000047364	-	100	77.165	Gallus_gallus
ENSLOCG00000007647	elavl3	99	96.409	ENSGAFG00000016015	elavl3	98	96.409	Gambusia_affinis
ENSLOCG00000007647	elavl3	100	95.890	ENSGACG00000013839	elavl3	100	95.890	Gasterosteus_aculeatus
ENSLOCG00000007647	elavl3	82	93.004	ENSGAGG00000016141	ELAVL3	99	93.004	Gopherus_agassizii
ENSLOCG00000007647	elavl3	99	88.154	ENSGGOG00000008635	ELAVL3	99	89.256	Gorilla_gorilla
ENSLOCG00000007647	elavl3	100	94.521	ENSHBUG00000020978	elavl3	100	94.521	Haplochromis_burtoni
ENSLOCG00000007647	elavl3	100	88.011	ENSHGLG00000015199	ELAVL3	100	89.101	Heterocephalus_glaber_female
ENSLOCG00000007647	elavl3	84	67.752	ENSHGLG00000019379	-	97	67.752	Heterocephalus_glaber_female
ENSLOCG00000007647	elavl3	95	86.533	ENSHGLG00100011200	ELAVL3	100	87.679	Heterocephalus_glaber_male
ENSLOCG00000007647	elavl3	100	97.534	ENSHCOG00000015894	elavl3	100	97.534	Hippocampus_comes
ENSLOCG00000007647	elavl3	99	92.287	ENSIPUG00000013002	elavl3	98	92.287	Ictalurus_punctatus
ENSLOCG00000007647	elavl3	100	88.011	ENSSTOG00000021111	ELAVL3	100	89.101	Ictidomys_tridecemlineatus
ENSLOCG00000007647	elavl3	99	89.256	ENSJJAG00000023513	Elavl3	99	89.256	Jaculus_jaculus
ENSLOCG00000007647	elavl3	99	93.094	ENSKMAG00000017412	elavl3	99	93.094	Kryptolebias_marmoratus
ENSLOCG00000007647	elavl3	100	92.329	ENSLBEG00000008073	elavl3	100	91.406	Labrus_bergylta
ENSLOCG00000007647	elavl3	99	88.462	ENSLAFG00000005013	ELAVL3	99	89.560	Loxodonta_africana
ENSLOCG00000007647	elavl3	100	88.011	ENSMFAG00000003692	ELAVL3	100	89.101	Macaca_fascicularis
ENSLOCG00000007647	elavl3	100	88.011	ENSMMUG00000020616	ELAVL3	100	89.101	Macaca_mulatta
ENSLOCG00000007647	elavl3	100	87.738	ENSMNEG00000043973	ELAVL3	100	88.828	Macaca_nemestrina
ENSLOCG00000007647	elavl3	98	82.449	ENSMLEG00000013976	ELAVL3	100	82.449	Mandrillus_leucophaeus
ENSLOCG00000007647	elavl3	99	92.541	ENSMAMG00000011697	elavl3	99	92.541	Mastacembelus_armatus
ENSLOCG00000007647	elavl3	100	96.438	ENSMZEG00005019053	elavl3	100	96.438	Maylandia_zebra
ENSLOCG00000007647	elavl3	99	87.603	ENSMAUG00000016478	Elavl3	99	88.705	Mesocricetus_auratus
ENSLOCG00000007647	elavl3	99	88.462	ENSMICG00000016528	ELAVL3	99	89.560	Microcebus_murinus
ENSLOCG00000007647	elavl3	100	87.466	ENSMOCG00000002046	Elavl3	100	88.556	Microtus_ochrogaster
ENSLOCG00000007647	elavl3	99	93.094	ENSMMOG00000012154	elavl3	99	93.094	Mola_mola
ENSLOCG00000007647	elavl3	99	88.981	ENSMODG00000006653	ELAVL3	92	88.981	Monodelphis_domestica
ENSLOCG00000007647	elavl3	99	96.409	ENSMALG00000016659	elavl3	99	96.409	Monopterus_albus
ENSLOCG00000007647	elavl3	100	87.466	MGP_CAROLIEiJ_G0031894	Elavl3	100	88.579	Mus_caroli
ENSLOCG00000007647	elavl3	100	87.466	ENSMUSG00000003410	Elavl3	100	88.556	Mus_musculus
ENSLOCG00000007647	elavl3	100	87.193	MGP_PahariEiJ_G0014760	Elavl3	100	88.301	Mus_pahari
ENSLOCG00000007647	elavl3	100	87.738	ENSMPUG00000005040	ELAVL3	100	88.828	Mustela_putorius_furo
ENSLOCG00000007647	elavl3	99	89.835	ENSMLUG00000016320	ELAVL3	99	89.835	Myotis_lucifugus
ENSLOCG00000007647	elavl3	100	88.011	ENSNGAG00000000968	Elavl3	100	89.101	Nannospalax_galili
ENSLOCG00000007647	elavl3	99	96.409	ENSNBRG00000010319	elavl3	99	96.409	Neolamprologus_brichardi
ENSLOCG00000007647	elavl3	99	92.011	ENSMEUG00000016706	ELAVL3	99	92.011	Notamacropus_eugenii
ENSLOCG00000007647	elavl3	83	88.618	ENSOPRG00000007373	ELAVL3	99	88.618	Ochotona_princeps
ENSLOCG00000007647	elavl3	100	88.011	ENSODEG00000015790	ELAVL3	100	89.101	Octodon_degus
ENSLOCG00000007647	elavl3	99	96.409	ENSONIG00000001538	elavl3	98	96.409	Oreochromis_niloticus
ENSLOCG00000007647	elavl3	88	93.254	ENSOANG00000015046	ELAVL3	98	93.254	Ornithorhynchus_anatinus
ENSLOCG00000007647	elavl3	100	96.164	ENSORLG00000005379	elavl3	100	96.164	Oryzias_latipes
ENSLOCG00000007647	elavl3	100	96.438	ENSORLG00020004570	elavl3	100	96.438	Oryzias_latipes_hni
ENSLOCG00000007647	elavl3	100	95.342	ENSORLG00015000662	elavl3	100	95.342	Oryzias_latipes_hsok
ENSLOCG00000007647	elavl3	100	92.877	ENSOMEG00000023959	elavl3	100	92.877	Oryzias_melastigma
ENSLOCG00000007647	elavl3	100	88.011	ENSOGAG00000007072	ELAVL3	100	89.101	Otolemur_garnettii
ENSLOCG00000007647	elavl3	100	88.283	ENSOARG00000018464	ELAVL3	100	89.373	Ovis_aries
ENSLOCG00000007647	elavl3	100	88.011	ENSPPAG00000033972	ELAVL3	100	89.101	Pan_paniscus
ENSLOCG00000007647	elavl3	100	88.011	ENSPPRG00000005151	ELAVL3	100	89.101	Panthera_pardus
ENSLOCG00000007647	elavl3	98	83.815	ENSPTIG00000013610	ELAVL3	97	84.971	Panthera_tigris_altaica
ENSLOCG00000007647	elavl3	100	88.011	ENSPTRG00000010506	ELAVL3	100	89.101	Pan_troglodytes
ENSLOCG00000007647	elavl3	100	88.011	ENSPANG00000005849	ELAVL3	100	89.101	Papio_anubis
ENSLOCG00000007647	elavl3	100	96.712	ENSPKIG00000016207	elavl3	100	96.712	Paramormyrops_kingsleyae
ENSLOCG00000007647	elavl3	100	93.151	ENSPMGG00000002016	elavl3	100	93.151	Periophthalmus_magnuspinnatus
ENSLOCG00000007647	elavl3	98	91.489	ENSPFOG00000007754	elavl3	100	91.489	Poecilia_formosa
ENSLOCG00000007647	elavl3	100	92.055	ENSPLAG00000001547	elavl3	100	92.055	Poecilia_latipinna
ENSLOCG00000007647	elavl3	98	93.036	ENSPMEG00000010156	elavl3	99	93.036	Poecilia_mexicana
ENSLOCG00000007647	elavl3	100	96.438	ENSPREG00000006971	elavl3	100	96.438	Poecilia_reticulata
ENSLOCG00000007647	elavl3	85	78.746	ENSPPYG00000009583	-	98	80.139	Pongo_abelii
ENSLOCG00000007647	elavl3	84	86.047	ENSPCAG00000015952	ELAVL3	65	88.372	Procavia_capensis
ENSLOCG00000007647	elavl3	100	88.011	ENSPCOG00000023781	ELAVL3	100	89.101	Propithecus_coquereli
ENSLOCG00000007647	elavl3	100	88.011	ENSPVAG00000014893	ELAVL3	100	89.101	Pteropus_vampyrus
ENSLOCG00000007647	elavl3	100	92.877	ENSPNYG00000013186	elavl3	98	92.877	Pundamilia_nyererei
ENSLOCG00000007647	elavl3	100	97.808	ENSPNAG00000003633	elavl3	100	97.808	Pygocentrus_nattereri
ENSLOCG00000007647	elavl3	100	87.466	ENSRNOG00000013752	Elavl3	100	88.556	Rattus_norvegicus
ENSLOCG00000007647	elavl3	100	88.011	ENSRBIG00000034762	ELAVL3	100	89.101	Rhinopithecus_bieti
ENSLOCG00000007647	elavl3	90	86.381	ENSRROG00000034305	ELAVL3	100	85.366	Rhinopithecus_roxellana
ENSLOCG00000007647	elavl3	99	88.154	ENSSBOG00000030047	ELAVL3	100	89.342	Saimiri_boliviensis_boliviensis
ENSLOCG00000007647	elavl3	96	93.043	ENSSHAG00000005583	ELAVL3	100	93.043	Sarcophilus_harrisii
ENSLOCG00000007647	elavl3	95	96.522	ENSSFOG00015023630	elavl3	100	96.522	Scleropages_formosus
ENSLOCG00000007647	elavl3	100	92.708	ENSSMAG00000004671	elavl3	100	92.708	Scophthalmus_maximus
ENSLOCG00000007647	elavl3	99	93.094	ENSSDUG00000020708	elavl3	99	93.094	Seriola_dumerili
ENSLOCG00000007647	elavl3	100	97.808	ENSSLDG00000013769	elavl3	100	97.808	Seriola_lalandi_dorsalis
ENSLOCG00000007647	elavl3	99	78.297	ENSSARG00000005949	ELAVL3	99	79.396	Sorex_araneus
ENSLOCG00000007647	elavl3	99	92.582	ENSSPAG00000000990	elavl3	100	92.582	Stegastes_partitus
ENSLOCG00000007647	elavl3	100	88.011	ENSSSCG00000013617	ELAVL3	100	89.101	Sus_scrofa
ENSLOCG00000007647	elavl3	98	93.036	ENSTRUG00000010719	elavl3	99	93.036	Takifugu_rubripes
ENSLOCG00000007647	elavl3	99	95.616	ENSTNIG00000018572	elavl3	99	95.616	Tetraodon_nigroviridis
ENSLOCG00000007647	elavl3	97	82.209	ENSTBEG00000006133	ELAVL3	99	83.436	Tupaia_belangeri
ENSLOCG00000007647	elavl3	100	87.738	ENSTTRG00000001789	ELAVL3	100	88.828	Tursiops_truncatus
ENSLOCG00000007647	elavl3	99	84.848	ENSUAMG00000000405	ELAVL3	99	85.479	Ursus_americanus
ENSLOCG00000007647	elavl3	98	81.818	ENSUMAG00000019546	ELAVL3	88	83.117	Ursus_maritimus
ENSLOCG00000007647	elavl3	100	87.193	ENSVVUG00000023733	ELAVL3	100	88.283	Vulpes_vulpes
ENSLOCG00000007647	elavl3	99	91.781	ENSXETG00000016741	elavl3	99	91.781	Xenopus_tropicalis
ENSLOCG00000007647	elavl3	100	92.877	ENSXMAG00000018287	elavl3	100	92.877	Xiphophorus_maculatus