EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSLOCG00000007820 (Gene tree)
Gene ID
102689182
Gene Symbol
smarca4a
Alias
brahma-related gene 1|brg1|smarca2|smarca4|wu:fb51a08|yng|young
Full Name
SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 4
Gene Type
protein_coding
Species
Lepisosteus_oculatus
Status
putative
Strand
Minus strand
Length
32439 bases
Position
chrLG6:15916327-15948765
Accession
102689182
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSLOCP00000009505ResIIIPF04851.151.3e-0911
ENSLOCP00000009505BRKPF07533.164.3e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSLOCT00000009516-5588XM_006631607ENSLOCP000000095051603 (aa)XP_006631670W5MM96
Gene Model
Click here to download ENSLOCG00000007820's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000007820's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSLOCG00000007820smarca4a9672.579ENSLOCG00000011499smarca29473.688
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSLOCG00000007820smarca4a7992.587ENSG00000127616SMARCA499100.000Homo_sapiens
ENSLOCG00000007820smarca4a9580.724ENSAPOG00000004542SMARCA49983.010Acanthochromis_polyacanthus
ENSLOCG00000007820smarca4a7689.717ENSAPOG00000003509smarca4a9888.006Acanthochromis_polyacanthus
ENSLOCG00000007820smarca4a7986.927ENSAMEG00000010868SMARCA410083.591Ailuropoda_melanoleuca
ENSLOCG00000007820smarca4a9583.431ENSACIG00000003035-9783.812Amphilophus_citrinellus
ENSLOCG00000007820smarca4a9986.361ENSACIG00000021550smarca4a9886.733Amphilophus_citrinellus
ENSLOCG00000007820smarca4a8984.403ENSAOCG00000019167smarca4a10085.170Amphiprion_ocellaris
ENSLOCG00000007820smarca4a9483.739ENSAOCG00000009450-9784.737Amphiprion_ocellaris
ENSLOCG00000007820smarca4a9980.509ENSAPEG00000023108-9881.113Amphiprion_percula
ENSLOCG00000007820smarca4a8984.472ENSAPEG00000015559smarca4a10085.239Amphiprion_percula
ENSLOCG00000007820smarca4a9982.145ENSATEG00000001094-9882.744Anabas_testudineus
ENSLOCG00000007820smarca4a9986.213ENSATEG00000011524smarca4a10086.520Anabas_testudineus
ENSLOCG00000007820smarca4a9389.333ENSANAG00000036991SMARCA410084.880Aotus_nancymaae
ENSLOCG00000007820smarca4a9987.107ENSACLG00000000163smarca4a9887.736Astatotilapia_calliptera
ENSLOCG00000007820smarca4a9583.061ENSACLG00000008638-9883.301Astatotilapia_calliptera
ENSLOCG00000007820smarca4a9485.052ENSAMXG00000011238-9585.098Astyanax_mexicanus
ENSLOCG00000007820smarca4a9884.430ENSAMXG00000021023smarca4a9984.097Astyanax_mexicanus
ENSLOCG00000007820smarca4a7992.666ENSBTAG00000019220SMARCA410088.268Bos_taurus
ENSLOCG00000007820smarca4a7891.363ENSCJAG00000005936SMARCA410084.086Callithrix_jacchus
ENSLOCG00000007820smarca4a7992.508ENSCAFG00000017584SMARCA410087.956Canis_familiaris
ENSLOCG00000007820smarca4a9982.641ENSCAFG00020024620SMARCA49987.963Canis_lupus_dingo
ENSLOCG00000007820smarca4a7987.953ENSCHIG00000015318SMARCA410084.749Capra_hircus
ENSLOCG00000007820smarca4a7992.508ENSTSYG00000012966SMARCA410088.206Carlito_syrichta
ENSLOCG00000007820smarca4a9485.239ENSCAPG00000015932SMARCA49392.570Cavia_aperea
ENSLOCG00000007820smarca4a7992.666ENSCPOG00000015549SMARCA410087.770Cavia_porcellus
ENSLOCG00000007820smarca4a7988.166ENSCCAG00000031660SMARCA49984.804Cebus_capucinus
ENSLOCG00000007820smarca4a9192.587ENSCATG00000029530SMARCA410088.017Cercocebus_atys
ENSLOCG00000007820smarca4a9986.580ENSCLAG00000011946SMARCA410088.206Chinchilla_lanigera
ENSLOCG00000007820smarca4a7992.277ENSCPBG00000009994SMARCA410087.847Chrysemys_picta_bellii
ENSLOCG00000007820smarca4a9389.778ENSCANG00000036013SMARCA410088.017Colobus_angolensis_palliatus
ENSLOCG00000007820smarca4a7992.429ENSCGRG00001016732Smarca410087.894Cricetulus_griseus_chok1gshd
ENSLOCG00000007820smarca4a7992.429ENSCGRG00000017242Smarca410087.894Cricetulus_griseus_crigri
ENSLOCG00000007820smarca4a9685.225ENSCSEG00000014771smarca4a10085.749Cynoglossus_semilaevis
ENSLOCG00000007820smarca4a9980.595ENSCVAG00000003018-9882.467Cyprinodon_variegatus
ENSLOCG00000007820smarca4a9985.511ENSCVAG00000006979smarca4a9985.945Cyprinodon_variegatus
ENSLOCG00000007820smarca4a9281.981ENSDARG00000104339SMARCA49481.988Danio_rerio
ENSLOCG00000007820smarca4a9986.789ENSDARG00000077226smarca4a10087.217Danio_rerio
ENSLOCG00000007820smarca4a7985.353ENSDNOG00000048847SMARCA49093.514Dasypus_novemcinctus
ENSLOCG00000007820smarca4a6487.269ENSDORG00000002544Smarca49181.678Dipodomys_ordii
ENSLOCG00000007820smarca4a8486.694ENSETEG00000013361SMARCA49475.969Echinops_telfairi
ENSLOCG00000007820smarca4a9983.644ENSEASG00005006167SMARCA410085.852Equus_asinus_asinus
ENSLOCG00000007820smarca4a7992.350ENSECAG00000008334SMARCA410087.770Equus_caballus
ENSLOCG00000007820smarca4a9388.091ENSELUG00000023232-8383.798Esox_lucius
ENSLOCG00000007820smarca4a9986.020ENSELUG00000010247smarca4a10085.471Esox_lucius
ENSLOCG00000007820smarca4a7992.447ENSFCAG00000004894SMARCA410087.855Felis_catus
ENSLOCG00000007820smarca4a7492.081ENSFALG00000004208SMARCA49584.595Ficedula_albicollis
ENSLOCG00000007820smarca4a7192.681ENSFDAG00000012237SMARCA49787.593Fukomys_damarensis
ENSLOCG00000007820smarca4a9684.326ENSFHEG00000010182smarca4a10084.438Fundulus_heteroclitus
ENSLOCG00000007820smarca4a9981.339ENSFHEG00000007902-9882.707Fundulus_heteroclitus
ENSLOCG00000007820smarca4a8581.491ENSGMOG00000005756-8580.617Gadus_morhua
ENSLOCG00000007820smarca4a7989.831ENSGMOG00000002649smarca4a9483.631Gadus_morhua
ENSLOCG00000007820smarca4a5292.548ENSGALG00000047145SMARCA410086.172Gallus_gallus
ENSLOCG00000007820smarca4a9084.115ENSGAFG00000014900smarca4a9984.214Gambusia_affinis
ENSLOCG00000007820smarca4a9979.811ENSGAFG00000008827-9879.962Gambusia_affinis
ENSLOCG00000007820smarca4a9884.534ENSGACG00000006691smarca4a10084.587Gasterosteus_aculeatus
ENSLOCG00000007820smarca4a9977.966ENSGACG00000016033-9977.542Gasterosteus_aculeatus
ENSLOCG00000007820smarca4a7992.338ENSGAGG00000016757SMARCA410087.886Gopherus_agassizii
ENSLOCG00000007820smarca4a9192.587ENSGGOG00000009882SMARCA410088.017Gorilla_gorilla
ENSLOCG00000007820smarca4a9987.288ENSHBUG00000021172smarca4a10087.194Haplochromis_burtoni
ENSLOCG00000007820smarca4a9981.130ENSHBUG00000005447-9883.496Haplochromis_burtoni
ENSLOCG00000007820smarca4a7992.368ENSHGLG00000010519SMARCA410087.269Heterocephalus_glaber_female
ENSLOCG00000007820smarca4a7991.274ENSHGLG00100013774SMARCA410086.675Heterocephalus_glaber_male
ENSLOCG00000007820smarca4a9585.052ENSHCOG00000009510smarca4a9686.091Hippocampus_comes
ENSLOCG00000007820smarca4a9882.834ENSIPUG00000016346-9783.058Ictalurus_punctatus
ENSLOCG00000007820smarca4a9986.789ENSIPUG00000006107smarca4a10086.361Ictalurus_punctatus
ENSLOCG00000007820smarca4a7992.508ENSSTOG00000007939SMARCA410087.832Ictidomys_tridecemlineatus
ENSLOCG00000007820smarca4a7990.238ENSJJAG00000012877Smarca410085.654Jaculus_jaculus
ENSLOCG00000007820smarca4a9985.831ENSKMAG00000011931smarca4a10086.249Kryptolebias_marmoratus
ENSLOCG00000007820smarca4a9980.142ENSKMAG00000019518-9884.760Kryptolebias_marmoratus
ENSLOCG00000007820smarca4a9585.241ENSLBEG00000017383smarca4a9785.584Labrus_bergylta
ENSLOCG00000007820smarca4a9583.075ENSLBEG00000020655-9882.893Labrus_bergylta
ENSLOCG00000007820smarca4a5178.554ENSLACG00000015309SMARCA410079.302Latimeria_chalumnae
ENSLOCG00000007820smarca4a9983.958ENSLAFG00000001433SMARCA410087.916Loxodonta_africana
ENSLOCG00000007820smarca4a8792.587ENSMFAG00000032146SMARCA49988.025Macaca_fascicularis
ENSLOCG00000007820smarca4a8792.265ENSMMUG00000012042SMARCA49594.451Macaca_mulatta
ENSLOCG00000007820smarca4a8892.587ENSMNEG00000028512SMARCA410088.126Macaca_nemestrina
ENSLOCG00000007820smarca4a9392.587ENSMLEG00000034976SMARCA410087.793Mandrillus_leucophaeus
ENSLOCG00000007820smarca4a9583.312ENSMAMG00000002841-9885.072Mastacembelus_armatus
ENSLOCG00000007820smarca4a9986.536ENSMAMG00000009256smarca4a10086.781Mastacembelus_armatus
ENSLOCG00000007820smarca4a9482.972ENSMZEG00005023861-9881.423Maylandia_zebra
ENSLOCG00000007820smarca4a9987.170ENSMZEG00005003889smarca4a10087.079Maylandia_zebra
ENSLOCG00000007820smarca4a7992.211ENSMAUG00000020731Smarca410087.608Mesocricetus_auratus
ENSLOCG00000007820smarca4a9389.778ENSMICG00000009806SMARCA410087.793Microcebus_murinus
ENSLOCG00000007820smarca4a7992.132ENSMOCG00000022209Smarca410087.608Microtus_ochrogaster
ENSLOCG00000007820smarca4a9981.179ENSMMOG00000008466-8286.228Mola_mola
ENSLOCG00000007820smarca4a9584.221ENSMMOG00000007571smarca4a9884.363Mola_mola
ENSLOCG00000007820smarca4a7990.377ENSMODG00000006287SMARCA410086.182Monodelphis_domestica
ENSLOCG00000007820smarca4a8982.476ENSMALG00000021534-9981.597Monopterus_albus
ENSLOCG00000007820smarca4a9686.159ENSMALG00000003388smarca4a10085.915Monopterus_albus
ENSLOCG00000007820smarca4a7992.429MGP_CAROLIEiJ_G0031879Smarca410087.832Mus_caroli
ENSLOCG00000007820smarca4a7992.429ENSMUSG00000032187Smarca410087.832Mus_musculus
ENSLOCG00000007820smarca4a7992.429MGP_PahariEiJ_G0014745Smarca410088.159Mus_pahari
ENSLOCG00000007820smarca4a7992.429MGP_SPRETEiJ_G0033003Smarca410087.832Mus_spretus
ENSLOCG00000007820smarca4a7992.508ENSMPUG00000005711SMARCA410087.894Mustela_putorius_furo
ENSLOCG00000007820smarca4a7992.666ENSMLUG00000004491-10088.079Myotis_lucifugus
ENSLOCG00000007820smarca4a9985.133ENSNGAG00000021852Smarca410087.616Nannospalax_galili
ENSLOCG00000007820smarca4a6793.197ENSNBRG00000018865-9983.264Neolamprologus_brichardi
ENSLOCG00000007820smarca4a9585.260ENSNBRG00000011457smarca4a9685.798Neolamprologus_brichardi
ENSLOCG00000007820smarca4a8788.487ENSNLEG00000012389SMARCA49584.665Nomascus_leucogenys
ENSLOCG00000007820smarca4a8093.103ENSOPRG00000000885-7893.103Ochotona_princeps
ENSLOCG00000007820smarca4a9986.226ENSODEG00000017127SMARCA48289.329Octodon_degus
ENSLOCG00000007820smarca4a9988.020ENSONIG00000008196smarca4a10087.918Oreochromis_niloticus
ENSLOCG00000007820smarca4a9981.310ENSONIG00000018040-9981.239Oreochromis_niloticus
ENSLOCG00000007820smarca4a9879.876ENSOCUG00000001787SMARCA49881.980Oryctolagus_cuniculus
ENSLOCG00000007820smarca4a9684.858ENSORLG00000015452smarca4a10085.399Oryzias_latipes
ENSLOCG00000007820smarca4a8884.702ENSORLG00000003955-9980.912Oryzias_latipes
ENSLOCG00000007820smarca4a8884.664ENSORLG00020009728-9980.667Oryzias_latipes_hni
ENSLOCG00000007820smarca4a9984.784ENSORLG00020004611smarca4a10085.399Oryzias_latipes_hni
ENSLOCG00000007820smarca4a9978.744ENSORLG00015007739-9980.473Oryzias_latipes_hsok
ENSLOCG00000007820smarca4a9984.845ENSORLG00015016560smarca4a10085.399Oryzias_latipes_hsok
ENSLOCG00000007820smarca4a8984.472ENSOMEG00000016626-9980.545Oryzias_melastigma
ENSLOCG00000007820smarca4a9985.201ENSOMEG00000007486smarca4a10085.890Oryzias_melastigma
ENSLOCG00000007820smarca4a6890.602ENSOGAG00000016148SMARCA410085.921Otolemur_garnettii
ENSLOCG00000007820smarca4a7992.114ENSOARG00000017454SMARCA410087.647Ovis_aries
ENSLOCG00000007820smarca4a7992.587ENSPPAG00000043191SMARCA410088.017Pan_paniscus
ENSLOCG00000007820smarca4a7992.447ENSPPRG00000000064SMARCA410087.855Panthera_pardus
ENSLOCG00000007820smarca4a7987.404ENSPTIG00000017447SMARCA410082.577Panthera_tigris_altaica
ENSLOCG00000007820smarca4a7992.587ENSPTRG00000010488SMARCA410088.017Pan_troglodytes
ENSLOCG00000007820smarca4a9392.587ENSPANG00000011042SMARCA49988.133Papio_anubis
ENSLOCG00000007820smarca4a9984.925ENSPKIG00000010087-9785.778Paramormyrops_kingsleyae
ENSLOCG00000007820smarca4a9987.353ENSPKIG00000007770SMARCA410088.142Paramormyrops_kingsleyae
ENSLOCG00000007820smarca4a9980.297ENSPSIG00000005547SMARCA410082.011Pelodiscus_sinensis
ENSLOCG00000007820smarca4a7992.211ENSPEMG00000020389Smarca410087.670Peromyscus_maniculatus_bairdii
ENSLOCG00000007820smarca4a7992.660ENSPCIG00000017138SMARCA410088.504Phascolarctos_cinereus
ENSLOCG00000007820smarca4a8983.753ENSPFOG00000012930-9981.411Poecilia_formosa
ENSLOCG00000007820smarca4a9983.959ENSPFOG00000007892smarca4a10084.742Poecilia_formosa
ENSLOCG00000007820smarca4a9984.019ENSPLAG00000014294smarca4a10084.802Poecilia_latipinna
ENSLOCG00000007820smarca4a9983.188ENSPLAG00000018616-9884.456Poecilia_latipinna
ENSLOCG00000007820smarca4a7691.585ENSPMEG00000008929-9882.568Poecilia_mexicana
ENSLOCG00000007820smarca4a9584.468ENSPMEG00000003725smarca4a9784.847Poecilia_mexicana
ENSLOCG00000007820smarca4a9580.473ENSPREG00000014823-9781.721Poecilia_reticulata
ENSLOCG00000007820smarca4a9983.250ENSPREG00000014608smarca4a10084.242Poecilia_reticulata
ENSLOCG00000007820smarca4a7990.238ENSPPYG00000009568SMARCA410085.775Pongo_abelii
ENSLOCG00000007820smarca4a6892.053ENSPCAG00000014054SMARCA47593.182Procavia_capensis
ENSLOCG00000007820smarca4a9192.429ENSPCOG00000023011SMARCA410087.731Propithecus_coquereli
ENSLOCG00000007820smarca4a7789.333ENSPVAG00000007787SMARCA49677.486Pteropus_vampyrus
ENSLOCG00000007820smarca4a9984.962ENSPNYG00000000717smarca4a9687.178Pundamilia_nyererei
ENSLOCG00000007820smarca4a7292.784ENSPNYG00000023995-9883.681Pundamilia_nyererei
ENSLOCG00000007820smarca4a9090.701ENSPNAG00000024136smarca4a9784.260Pygocentrus_nattereri
ENSLOCG00000007820smarca4a9584.536ENSPNAG00000006636-9484.518Pygocentrus_nattereri
ENSLOCG00000007820smarca4a7992.350ENSRNOG00000009271Smarca410087.832Rattus_norvegicus
ENSLOCG00000007820smarca4a9192.508ENSRBIG00000038696SMARCA49987.963Rhinopithecus_bieti
ENSLOCG00000007820smarca4a9389.778ENSRROG00000045509SMARCA410087.956Rhinopithecus_roxellana
ENSLOCG00000007820smarca4a9292.423ENSSBOG00000026896SMARCA49888.157Saimiri_boliviensis_boliviensis
ENSLOCG00000007820smarca4a7992.502ENSSHAG00000001642SMARCA410088.381Sarcophilus_harrisii
ENSLOCG00000007820smarca4a9683.796ENSSFOG00015009921-9388.419Scleropages_formosus
ENSLOCG00000007820smarca4a9988.154ENSSFOG00015013823smarca410088.753Scleropages_formosus
ENSLOCG00000007820smarca4a9979.167ENSSMAG00000014082-9979.770Scophthalmus_maximus
ENSLOCG00000007820smarca4a9985.840ENSSMAG00000003200smarca4a10084.951Scophthalmus_maximus
ENSLOCG00000007820smarca4a9982.873ENSSDUG00000005388-9584.701Seriola_dumerili
ENSLOCG00000007820smarca4a9983.323ENSSDUG00000017298smarca4a10083.447Seriola_dumerili
ENSLOCG00000007820smarca4a9583.398ENSSLDG00000023663-9785.212Seriola_lalandi_dorsalis
ENSLOCG00000007820smarca4a9986.278ENSSLDG00000024486smarca4a10085.783Seriola_lalandi_dorsalis
ENSLOCG00000007820smarca4a6398.137ENSSARG00000013477SMARCA48198.137Sorex_araneus
ENSLOCG00000007820smarca4a7091.037ENSSPUG00000004558SMARCA49884.109Sphenodon_punctatus
ENSLOCG00000007820smarca4a9980.831ENSSPAG00000012533-9980.203Stegastes_partitus
ENSLOCG00000007820smarca4a9985.914ENSSPAG00000004248smarca4a10085.688Stegastes_partitus
ENSLOCG00000007820smarca4a7992.447ENSSSCG00000013629SMARCA410087.916Sus_scrofa
ENSLOCG00000007820smarca4a5386.137ENSTGUG00000015488-9885.936Taeniopygia_guttata
ENSLOCG00000007820smarca4a9578.774ENSTRUG00000001378SMARCA49880.406Takifugu_rubripes
ENSLOCG00000007820smarca4a8980.466ENSTRUG00000004885smarca4a10080.780Takifugu_rubripes
ENSLOCG00000007820smarca4a7386.170ENSTNIG00000004859-10086.170Tetraodon_nigroviridis
ENSLOCG00000007820smarca4a9979.212ENSTNIG00000004536SMARCA49981.029Tetraodon_nigroviridis
ENSLOCG00000007820smarca4a7988.394ENSTTRG00000009519SMARCA410084.242Tursiops_truncatus
ENSLOCG00000007820smarca4a7992.587ENSUAMG00000014661SMARCA410087.956Ursus_americanus
ENSLOCG00000007820smarca4a8791.002ENSUMAG00000022005SMARCA49988.889Ursus_maritimus
ENSLOCG00000007820smarca4a8792.508ENSVVUG00000017820SMARCA49787.963Vulpes_vulpes
ENSLOCG00000007820smarca4a9982.117ENSXETG00000009355smarca410081.592Xenopus_tropicalis
ENSLOCG00000007820smarca4a9984.559ENSXMAG00000006321smarca4a10084.930Xiphophorus_maculatus
ENSLOCG00000007820smarca4a9980.499ENSXMAG00000007030-9981.911Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us