EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLOCG00000007880 (Gene tree)
Gene ID: 102682538
Gene Symbol: atxn2
Alias: si:dkey-165i4.1
Full Name: ataxin 2
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 45774 bases
Position: chrLG20:12995711-13041484
Accession: 102682538
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000009587	PAM2	PF07145.15	1.6e-06	1	1
ENSLOCP00000009572	PAM2	PF07145.15	1.7e-06	1	1
ENSLOCP00000009587	LsmAD	PF06741.13	2.7e-16	1	1
ENSLOCP00000009572	LsmAD	PF06741.13	3.1e-16	1	1
ENSLOCP00000009587	SM-ATX	PF14438.6	2.1e-21	1	1
ENSLOCP00000009572	SM-ATX	PF14438.6	3.1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000009583	-	3291	-	ENSLOCP00000009572	1094 (aa)	-	W5MMG3
ENSLOCT00000009598	-	3072	XM_006640446	ENSLOCP00000009587	1023 (aa)	-	W5MMH8

Gene Model

Click here to download ENSLOCG00000007880's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000007880's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000007880	atxn2	96	73.052	ENSG00000204842	ATXN2	91	78.231	Homo_sapiens
ENSLOCG00000007880	atxn2	91	81.494	ENSAPOG00000014663	atxn2	99	71.963	Acanthochromis_polyacanthus
ENSLOCG00000007880	atxn2	97	68.537	ENSAMEG00000013747	ATXN2	95	73.186	Ailuropoda_melanoleuca
ENSLOCG00000007880	atxn2	94	63.458	ENSACIG00000004928	atxn2	99	64.451	Amphilophus_citrinellus
ENSLOCG00000007880	atxn2	99	71.482	ENSAOCG00000001107	atxn2	97	79.872	Amphiprion_ocellaris
ENSLOCG00000007880	atxn2	99	71.147	ENSAPEG00000020250	atxn2	99	71.682	Amphiprion_percula
ENSLOCG00000007880	atxn2	94	66.759	ENSATEG00000018587	atxn2	99	68.426	Anabas_testudineus
ENSLOCG00000007880	atxn2	96	76.206	ENSAPLG00000008724	ATXN2	95	75.710	Anas_platyrhynchos
ENSLOCG00000007880	atxn2	96	71.383	ENSACAG00000002419	ATXN2	95	70.978	Anolis_carolinensis
ENSLOCG00000007880	atxn2	97	73.248	ENSANAG00000022522	ATXN2	95	74.237	Aotus_nancymaae
ENSLOCG00000007880	atxn2	94	67.416	ENSACLG00000013359	atxn2	97	66.070	Astatotilapia_calliptera
ENSLOCG00000007880	atxn2	99	71.592	ENSAMXG00000002342	atxn2	99	77.745	Astyanax_mexicanus
ENSLOCG00000007880	atxn2	96	68.756	ENSBTAG00000022069	ATXN2	99	68.962	Bos_taurus
ENSLOCG00000007880	atxn2	97	73.502	ENSCJAG00000011756	ATXN2	99	68.019	Callithrix_jacchus
ENSLOCG00000007880	atxn2	96	73.443	ENSCAFG00000008606	ATXN2	78	72.981	Canis_familiaris
ENSLOCG00000007880	atxn2	94	74.740	ENSCAFG00020017041	ATXN2	95	74.237	Canis_lupus_dingo
ENSLOCG00000007880	atxn2	98	67.612	ENSCHIG00000012141	ATXN2	83	67.553	Capra_hircus
ENSLOCG00000007880	atxn2	96	72.903	ENSTSYG00000002717	ATXN2	95	73.559	Carlito_syrichta
ENSLOCG00000007880	atxn2	72	85.841	ENSCAPG00000013332	ATXN2	83	85.841	Cavia_aperea
ENSLOCG00000007880	atxn2	97	73.101	ENSCPOG00000001390	ATXN2	91	76.018	Cavia_porcellus
ENSLOCG00000007880	atxn2	97	73.502	ENSCCAG00000026267	ATXN2	95	74.237	Cebus_capucinus
ENSLOCG00000007880	atxn2	96	72.727	ENSCATG00000017877	ATXN2	99	67.611	Cercocebus_atys
ENSLOCG00000007880	atxn2	97	68.997	ENSCLAG00000009324	ATXN2	94	73.186	Chinchilla_lanigera
ENSLOCG00000007880	atxn2	96	73.052	ENSCSAG00000002590	ATXN2	89	72.671	Chlorocebus_sabaeus
ENSLOCG00000007880	atxn2	78	63.525	ENSCHOG00000004284	ATXN2	86	63.525	Choloepus_hoffmanni
ENSLOCG00000007880	atxn2	94	68.688	ENSCPBG00000003465	ATXN2	99	69.085	Chrysemys_picta_bellii
ENSLOCG00000007880	atxn2	96	72.903	ENSCANG00000042302	ATXN2	95	73.559	Colobus_angolensis_palliatus
ENSLOCG00000007880	atxn2	97	65.867	ENSCGRG00001022603	Atxn2	84	65.321	Cricetulus_griseus_chok1gshd
ENSLOCG00000007880	atxn2	97	71.975	ENSCGRG00000015823	Atxn2	98	67.647	Cricetulus_griseus_crigri
ENSLOCG00000007880	atxn2	99	67.254	ENSCSEG00000018366	atxn2	97	77.597	Cynoglossus_semilaevis
ENSLOCG00000007880	atxn2	94	73.021	ENSCSEG00000009072	-	99	66.102	Cynoglossus_semilaevis
ENSLOCG00000007880	atxn2	94	74.926	ENSCVAG00000020160	atxn2	97	78.896	Cyprinodon_variegatus
ENSLOCG00000007880	atxn2	99	70.000	ENSDARG00000052897	atxn2	99	70.177	Danio_rerio
ENSLOCG00000007880	atxn2	96	73.052	ENSDNOG00000015696	ATXN2	94	77.419	Dasypus_novemcinctus
ENSLOCG00000007880	atxn2	97	64.635	ENSDORG00000000808	Atxn2	99	64.259	Dipodomys_ordii
ENSLOCG00000007880	atxn2	91	64.427	ENSETEG00000005224	ATXN2	76	64.427	Echinops_telfairi
ENSLOCG00000007880	atxn2	97	72.930	ENSEASG00005012077	ATXN2	95	74.237	Equus_asinus_asinus
ENSLOCG00000007880	atxn2	97	73.397	ENSECAG00000014347	ATXN2	80	68.680	Equus_caballus
ENSLOCG00000007880	atxn2	75	73.226	ENSEEUG00000014635	-	71	74.098	Erinaceus_europaeus
ENSLOCG00000007880	atxn2	95	75.802	ENSELUG00000019632	atxn2	99	75.802	Esox_lucius
ENSLOCG00000007880	atxn2	96	74.426	ENSFCAG00000003178	ATXN2	99	67.803	Felis_catus
ENSLOCG00000007880	atxn2	95	69.340	ENSFALG00000009001	ATXN2	99	69.528	Ficedula_albicollis
ENSLOCG00000007880	atxn2	97	68.635	ENSFDAG00000020942	ATXN2	99	68.911	Fukomys_damarensis
ENSLOCG00000007880	atxn2	88	75.291	ENSFHEG00000019561	atxn2	95	79.233	Fundulus_heteroclitus
ENSLOCG00000007880	atxn2	89	70.707	ENSGMOG00000007412	atxn2	92	69.115	Gadus_morhua
ENSLOCG00000007880	atxn2	94	73.171	ENSGALG00000004625	ATXN2	95	72.696	Gallus_gallus
ENSLOCG00000007880	atxn2	93	74.926	ENSGAFG00000003302	atxn2	97	78.896	Gambusia_affinis
ENSLOCG00000007880	atxn2	95	81.356	ENSGACG00000006295	atxn2	93	81.356	Gasterosteus_aculeatus
ENSLOCG00000007880	atxn2	94	70.183	ENSGAGG00000005014	ATXN2	99	70.487	Gopherus_agassizii
ENSLOCG00000007880	atxn2	94	74.394	ENSGGOG00000002137	ATXN2	95	73.898	Gorilla_gorilla
ENSLOCG00000007880	atxn2	91	80.844	ENSHBUG00000002921	atxn2	97	80.844	Haplochromis_burtoni
ENSLOCG00000007880	atxn2	97	67.160	ENSHGLG00000009812	ATXN2	84	67.493	Heterocephalus_glaber_female
ENSLOCG00000007880	atxn2	96	73.871	ENSHGLG00100019351	ATXN2	95	73.418	Heterocephalus_glaber_male
ENSLOCG00000007880	atxn2	99	68.655	ENSHCOG00000005278	atxn2	93	77.987	Hippocampus_comes
ENSLOCG00000007880	atxn2	99	68.281	ENSIPUG00000016649	atxn2	99	72.334	Ictalurus_punctatus
ENSLOCG00000007880	atxn2	96	73.548	ENSSTOG00000000978	ATXN2	91	76.471	Ictidomys_tridecemlineatus
ENSLOCG00000007880	atxn2	99	69.887	ENSKMAG00000000980	atxn2	99	70.395	Kryptolebias_marmoratus
ENSLOCG00000007880	atxn2	58	66.612	ENSLBEG00000017484	atxn2	94	66.445	Labrus_bergylta
ENSLOCG00000007880	atxn2	99	76.232	ENSLACG00000012531	ATXN2	99	73.529	Latimeria_chalumnae
ENSLOCG00000007880	atxn2	96	72.347	ENSLAFG00000007416	ATXN2	99	68.479	Loxodonta_africana
ENSLOCG00000007880	atxn2	96	72.727	ENSMFAG00000000374	ATXN2	95	73.559	Macaca_fascicularis
ENSLOCG00000007880	atxn2	94	75.779	ENSMMUG00000002226	ATXN2	95	75.254	Macaca_mulatta
ENSLOCG00000007880	atxn2	96	72.727	ENSMNEG00000035588	ATXN2	95	73.559	Macaca_nemestrina
ENSLOCG00000007880	atxn2	96	72.903	ENSMLEG00000024324	ATXN2	95	73.559	Mandrillus_leucophaeus
ENSLOCG00000007880	atxn2	91	79.545	ENSMAMG00000019160	atxn2	95	79.545	Mastacembelus_armatus
ENSLOCG00000007880	atxn2	91	80.844	ENSMZEG00005008476	atxn2	97	80.844	Maylandia_zebra
ENSLOCG00000007880	atxn2	96	75.241	ENSMGAG00000005288	ATXN2	95	74.763	Meleagris_gallopavo
ENSLOCG00000007880	atxn2	65	63.676	ENSMAUG00000008223	-	99	63.516	Mesocricetus_auratus
ENSLOCG00000007880	atxn2	94	74.394	ENSMICG00000013541	ATXN2	95	73.898	Microcebus_murinus
ENSLOCG00000007880	atxn2	82	67.826	ENSMOCG00000005219	Atxn2	91	75.566	Microtus_ochrogaster
ENSLOCG00000007880	atxn2	99	79.231	ENSMMOG00000013189	atxn2	99	68.378	Mola_mola
ENSLOCG00000007880	atxn2	98	69.597	ENSMODG00000012221	ATXN2	80	75.000	Monodelphis_domestica
ENSLOCG00000007880	atxn2	99	69.688	ENSMALG00000018529	atxn2	99	69.450	Monopterus_albus
ENSLOCG00000007880	atxn2	96	71.104	MGP_CAROLIEiJ_G0027692	Atxn2	98	64.220	Mus_caroli
ENSLOCG00000007880	atxn2	97	67.495	ENSMUSG00000042605	Atxn2	91	73.303	Mus_musculus
ENSLOCG00000007880	atxn2	87	71.354	MGP_PahariEiJ_G0024272	Atxn2	99	62.150	Mus_pahari
ENSLOCG00000007880	atxn2	96	71.429	MGP_SPRETEiJ_G0028690	Atxn2	91	73.756	Mus_spretus
ENSLOCG00000007880	atxn2	97	66.267	ENSMPUG00000002212	ATXN2	99	66.544	Mustela_putorius_furo
ENSLOCG00000007880	atxn2	97	66.973	ENSMLUG00000015559	ATXN2	99	67.341	Myotis_lucifugus
ENSLOCG00000007880	atxn2	94	68.377	ENSNBRG00000015794	atxn2	99	69.734	Neolamprologus_brichardi
ENSLOCG00000007880	atxn2	96	73.052	ENSNLEG00000000484	ATXN2	95	73.898	Nomascus_leucogenys
ENSLOCG00000007880	atxn2	81	80.892	ENSMEUG00000012244	-	80	79.755	Notamacropus_eugenii
ENSLOCG00000007880	atxn2	96	66.015	ENSOPRG00000014599	ATXN2	99	65.829	Ochotona_princeps
ENSLOCG00000007880	atxn2	94	75.433	ENSODEG00000010798	ATXN2	95	74.915	Octodon_degus
ENSLOCG00000007880	atxn2	96	68.931	ENSONIG00000014521	atxn2	98	70.027	Oreochromis_niloticus
ENSLOCG00000007880	atxn2	83	70.043	ENSOANG00000004796	ATXN2	94	84.049	Ornithorhynchus_anatinus
ENSLOCG00000007880	atxn2	97	71.609	ENSOCUG00000002855	ATXN2	67	71.207	Oryctolagus_cuniculus
ENSLOCG00000007880	atxn2	94	67.430	ENSORLG00000003606	atxn2	99	76.573	Oryzias_latipes
ENSLOCG00000007880	atxn2	96	67.285	ENSORLG00020000785	atxn2	97	75.719	Oryzias_latipes_hni
ENSLOCG00000007880	atxn2	96	66.992	ENSORLG00015012345	atxn2	97	75.719	Oryzias_latipes_hsok
ENSLOCG00000007880	atxn2	91	76.997	ENSOMEG00000020080	atxn2	97	76.997	Oryzias_melastigma
ENSLOCG00000007880	atxn2	96	72.403	ENSOGAG00000000609	ATXN2	83	68.474	Otolemur_garnettii
ENSLOCG00000007880	atxn2	97	68.416	ENSOARG00000018223	ATXN2	99	68.416	Ovis_aries
ENSLOCG00000007880	atxn2	97	72.930	ENSPPAG00000028043	ATXN2	95	73.898	Pan_paniscus
ENSLOCG00000007880	atxn2	96	73.443	ENSPPRG00000003573	ATXN2	99	67.898	Panthera_pardus
ENSLOCG00000007880	atxn2	96	73.226	ENSPTIG00000021122	ATXN2	95	73.898	Panthera_tigris_altaica
ENSLOCG00000007880	atxn2	94	74.394	ENSPTRG00000029540	ATXN2	95	73.898	Pan_troglodytes
ENSLOCG00000007880	atxn2	95	73.490	ENSPANG00000017168	ATXN2	95	73.559	Papio_anubis
ENSLOCG00000007880	atxn2	97	76.824	ENSPKIG00000023134	atxn2	99	76.414	Paramormyrops_kingsleyae
ENSLOCG00000007880	atxn2	96	72.669	ENSPSIG00000002353	-	95	74.448	Pelodiscus_sinensis
ENSLOCG00000007880	atxn2	94	79.371	ENSPMGG00000005074	atxn2	94	79.371	Periophthalmus_magnuspinnatus
ENSLOCG00000007880	atxn2	82	67.717	ENSPEMG00000015340	Atxn2	91	75.113	Peromyscus_maniculatus_bairdii
ENSLOCG00000007880	atxn2	61	58.163	ENSPMAG00000007157	atxn2	50	58.020	Petromyzon_marinus
ENSLOCG00000007880	atxn2	59	72.768	ENSPCIG00000006165	-	91	78.191	Phascolarctos_cinereus
ENSLOCG00000007880	atxn2	91	72.379	ENSPFOG00000005857	atxn2	97	65.171	Poecilia_formosa
ENSLOCG00000007880	atxn2	94	75.516	ENSPLAG00000015241	atxn2	97	79.545	Poecilia_latipinna
ENSLOCG00000007880	atxn2	94	75.516	ENSPMEG00000016681	atxn2	97	79.545	Poecilia_mexicana
ENSLOCG00000007880	atxn2	95	79.522	ENSPREG00000014825	atxn2	97	78.275	Poecilia_reticulata
ENSLOCG00000007880	atxn2	96	72.727	ENSPPYG00000004963	ATXN2	86	68.474	Pongo_abelii
ENSLOCG00000007880	atxn2	65	68.932	ENSPCAG00000004216	-	57	92.063	Procavia_capensis
ENSLOCG00000007880	atxn2	94	72.438	ENSPCOG00000022031	ATXN2	95	73.462	Propithecus_coquereli
ENSLOCG00000007880	atxn2	96	72.727	ENSPVAG00000013179	ATXN2	73	72.360	Pteropus_vampyrus
ENSLOCG00000007880	atxn2	58	65.455	ENSPNYG00000016981	atxn2	96	64.237	Pundamilia_nyererei
ENSLOCG00000007880	atxn2	99	73.088	ENSPNAG00000010889	atxn2	99	72.856	Pygocentrus_nattereri
ENSLOCG00000007880	atxn2	97	71.975	ENSRNOG00000001256	Atxn2	99	67.919	Rattus_norvegicus
ENSLOCG00000007880	atxn2	96	70.492	ENSRBIG00000039212	ATXN2	90	78.537	Rhinopithecus_bieti
ENSLOCG00000007880	atxn2	97	72.930	ENSRROG00000031170	ATXN2	95	73.898	Rhinopithecus_roxellana
ENSLOCG00000007880	atxn2	94	74.740	ENSSBOG00000031563	ATXN2	95	74.237	Saimiri_boliviensis_boliviensis
ENSLOCG00000007880	atxn2	97	74.121	ENSSHAG00000007304	ATXN2	99	69.733	Sarcophilus_harrisii
ENSLOCG00000007880	atxn2	95	71.725	ENSSFOG00015017229	atxn2	98	73.333	Scleropages_formosus
ENSLOCG00000007880	atxn2	90	79.872	ENSSMAG00000004627	atxn2	97	79.872	Scophthalmus_maximus
ENSLOCG00000007880	atxn2	91	82.792	ENSSDUG00000001223	atxn2	94	82.792	Seriola_dumerili
ENSLOCG00000007880	atxn2	94	68.238	ENSSLDG00000019837	atxn2	99	69.432	Seriola_lalandi_dorsalis
ENSLOCG00000007880	atxn2	76	73.361	ENSSARG00000006291	ATXN2	73	74.194	Sorex_araneus
ENSLOCG00000007880	atxn2	95	73.684	ENSSPUG00000010317	ATXN2	92	68.767	Sphenodon_punctatus
ENSLOCG00000007880	atxn2	91	81.494	ENSSPAG00000000377	atxn2	95	81.494	Stegastes_partitus
ENSLOCG00000007880	atxn2	96	73.312	ENSSSCG00000009834	ATXN2	90	72.671	Sus_scrofa
ENSLOCG00000007880	atxn2	96	67.114	ENSTGUG00000006497	ATXN2	99	67.306	Taeniopygia_guttata
ENSLOCG00000007880	atxn2	99	76.012	ENSTRUG00000016801	atxn2	96	76.115	Takifugu_rubripes
ENSLOCG00000007880	atxn2	84	69.231	ENSTBEG00000001985	ATXN2	87	69.231	Tupaia_belangeri
ENSLOCG00000007880	atxn2	87	70.536	ENSTTRG00000000952	ATXN2	76	70.619	Tursiops_truncatus
ENSLOCG00000007880	atxn2	96	68.582	ENSUAMG00000025295	ATXN2	94	68.658	Ursus_americanus
ENSLOCG00000007880	atxn2	95	68.862	ENSUMAG00000007315	ATXN2	95	74.237	Ursus_maritimus
ENSLOCG00000007880	atxn2	90	71.901	ENSVPAG00000005940	ATXN2	92	71.901	Vicugna_pacos
ENSLOCG00000007880	atxn2	94	74.740	ENSVVUG00000016107	ATXN2	95	74.237	Vulpes_vulpes
ENSLOCG00000007880	atxn2	96	63.889	ENSXETG00000020912	atxn2	95	70.513	Xenopus_tropicalis
ENSLOCG00000007880	atxn2	57	66.118	ENSXCOG00000010001	atxn2	99	66.335	Xiphophorus_couchianus
ENSLOCG00000007880	atxn2	94	74.926	ENSXMAG00000003481	atxn2	97	78.896	Xiphophorus_maculatus