EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSLOCG00000007896 (Gene tree)
Gene ID
-
Gene Symbol
si:ch1073-335m2.2
Alias
-
Full Name
spen family transcriptional repressor
Gene Type
protein_coding
Species
Lepisosteus_oculatus
Status
putative
Strand
Plus strand
Length
30921 bases
Position
chrLG25:14163878-14194798
Accession
102686502
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSLOCP00000009605RRM_5PF13893.67.8e-0912
ENSLOCP00000009605RRM_5PF13893.67.8e-0922
ENSLOCP00000009591RRM_5PF13893.68.3e-0912
ENSLOCP00000009591RRM_5PF13893.68.3e-0922
ENSLOCP00000009605RRM_1PF00076.221.5e-4214
ENSLOCP00000009605RRM_1PF00076.221.5e-4224
ENSLOCP00000009605RRM_1PF00076.221.5e-4234
ENSLOCP00000009605RRM_1PF00076.221.5e-4244
ENSLOCP00000009591RRM_1PF00076.221.6e-4214
ENSLOCP00000009591RRM_1PF00076.221.6e-4224
ENSLOCP00000009591RRM_1PF00076.221.6e-4234
ENSLOCP00000009591RRM_1PF00076.221.6e-4244
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSLOCT00000009616-12260XM_006642134ENSLOCP000000096053537 (aa)-W5MMJ6
ENSLOCT00000009602-12434-ENSLOCP000000095913595 (aa)-W5MMI2
Gene Model
Click here to download ENSLOCG00000007896's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000007896's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSLOCG00000007896si:ch1073-335m2.29785.517ENSAPOG00000009853-9785.517Acanthochromis_polyacanthus
ENSLOCG00000007896si:ch1073-335m2.29282.558ENSAPOG00000011411si:ch1073-335m2.29982.558Acanthochromis_polyacanthus
ENSLOCG00000007896si:ch1073-335m2.27066.667ENSAMEG00000011817SPEN10052.620Ailuropoda_melanoleuca
ENSLOCG00000007896si:ch1073-335m2.29785.517ENSAOCG00000014505-9785.517Amphiprion_ocellaris
ENSLOCG00000007896si:ch1073-335m2.28676.471ENSAOCG00000008077si:ch1073-335m2.29876.471Amphiprion_ocellaris
ENSLOCG00000007896si:ch1073-335m2.28982.558ENSAPEG00000013515si:ch1073-335m2.29982.558Amphiprion_percula
ENSLOCG00000007896si:ch1073-335m2.29785.517ENSAPEG00000010288-9785.517Amphiprion_percula
ENSLOCG00000007896si:ch1073-335m2.29785.517ENSATEG00000005627-9785.517Anabas_testudineus
ENSLOCG00000007896si:ch1073-335m2.28982.353ENSATEG00000007674si:ch1073-335m2.29982.353Anabas_testudineus
ENSLOCG00000007896si:ch1073-335m2.29957.459ENSAPLG00000012618SPEN10057.316Anas_platyrhynchos
ENSLOCG00000007896si:ch1073-335m2.29954.122ENSACAG00000013761SPEN10053.741Anolis_carolinensis
ENSLOCG00000007896si:ch1073-335m2.29953.821ENSANAG00000034428SPEN9653.944Aotus_nancymaae
ENSLOCG00000007896si:ch1073-335m2.28581.977ENSACLG00000021433si:ch1073-335m2.25381.977Astatotilapia_calliptera
ENSLOCG00000007896si:ch1073-335m2.29785.517ENSACLG00000016922-9785.517Astatotilapia_calliptera
ENSLOCG00000007896si:ch1073-335m2.29885.517ENSAMXG00000012485spen9785.517Astyanax_mexicanus
ENSLOCG00000007896si:ch1073-335m2.29954.113ENSBTAG00000018729SPEN10052.086Bos_taurus
ENSLOCG00000007896si:ch1073-335m2.29978.235ENSCJAG00000008527SPEN9678.235Callithrix_jacchus
ENSLOCG00000007896si:ch1073-335m2.28660.906ENSCAFG00000016132-9261.414Canis_familiaris
ENSLOCG00000007896si:ch1073-335m2.29954.144ENSCHIG00000025070SPEN10051.923Capra_hircus
ENSLOCG00000007896si:ch1073-335m2.29251.658ENSTSYG00000036016SPEN9651.816Carlito_syrichta
ENSLOCG00000007896si:ch1073-335m2.29853.638ENSCAPG00000013803SPEN10051.583Cavia_aperea
ENSLOCG00000007896si:ch1073-335m2.29853.826ENSCPOG00000014036SPEN9753.401Cavia_porcellus
ENSLOCG00000007896si:ch1073-335m2.29950.418ENSCCAG00000020258SPEN9650.777Cebus_capucinus
ENSLOCG00000007896si:ch1073-335m2.28893.333ENSCATG00000015079SPEN9692.647Cercocebus_atys
ENSLOCG00000007896si:ch1073-335m2.29752.959ENSCLAG00000002018SPEN9752.544Chinchilla_lanigera
ENSLOCG00000007896si:ch1073-335m2.29954.477ENSCSAG00000000841SPEN9753.879Chlorocebus_sabaeus
ENSLOCG00000007896si:ch1073-335m2.210057.139ENSCPBG00000010477SPEN10056.699Chrysemys_picta_bellii
ENSLOCG00000007896si:ch1073-335m2.29254.840ENSCANG00000034547SPEN9652.402Colobus_angolensis_palliatus
ENSLOCG00000007896si:ch1073-335m2.29952.396ENSCGRG00001007725Spen9752.065Cricetulus_griseus_chok1gshd
ENSLOCG00000007896si:ch1073-335m2.29951.142ENSCGRG00000010581Spen9751.046Cricetulus_griseus_crigri
ENSLOCG00000007896si:ch1073-335m2.29784.828ENSCSEG00000003915-9676.331Cynoglossus_semilaevis
ENSLOCG00000007896si:ch1073-335m2.29783.448ENSCVAG00000016346-9783.448Cyprinodon_variegatus
ENSLOCG00000007896si:ch1073-335m2.29786.207ENSDARG00000074245spen10091.111Danio_rerio
ENSLOCG00000007896si:ch1073-335m2.28969.198ENSDARG00000074332si:ch1073-335m2.29069.198Danio_rerio
ENSLOCG00000007896si:ch1073-335m2.210053.976ENSDNOG00000041948SPEN9753.588Dasypus_novemcinctus
ENSLOCG00000007896si:ch1073-335m2.29751.279ENSDORG00000023909Spen9751.603Dipodomys_ordii
ENSLOCG00000007896si:ch1073-335m2.26063.060ENSETEG00000016692-5862.935Echinops_telfairi
ENSLOCG00000007896si:ch1073-335m2.29592.647ENSEASG00005015911SPEN9692.647Equus_asinus_asinus
ENSLOCG00000007896si:ch1073-335m2.29592.647ENSECAG00000008833SPEN9692.647Equus_caballus
ENSLOCG00000007896si:ch1073-335m2.26493.023ENSEEUG00000010255SPEN5993.023Erinaceus_europaeus
ENSLOCG00000007896si:ch1073-335m2.29278.075ENSELUG00000007726si:ch1073-335m2.29478.075Esox_lucius
ENSLOCG00000007896si:ch1073-335m2.28955.948ENSFALG00000003551SPEN10055.599Ficedula_albicollis
ENSLOCG00000007896si:ch1073-335m2.29952.037ENSFDAG00000010212SPEN9154.153Fukomys_damarensis
ENSLOCG00000007896si:ch1073-335m2.29683.140ENSFHEG00000004544si:ch1073-335m2.25683.140Fundulus_heteroclitus
ENSLOCG00000007896si:ch1073-335m2.29784.138ENSGMOG00000008397-9784.138Gadus_morhua
ENSLOCG00000007896si:ch1073-335m2.29279.444ENSGMOG00000008156si:ch1073-335m2.29479.444Gadus_morhua
ENSLOCG00000007896si:ch1073-335m2.210057.896ENSGALG00000036932SPEN9957.623Gallus_gallus
ENSLOCG00000007896si:ch1073-335m2.29784.828ENSGAFG00000015819-9784.828Gambusia_affinis
ENSLOCG00000007896si:ch1073-335m2.27475.862ENSGAFG00000021570si:ch1073-335m2.29773.399Gambusia_affinis
ENSLOCG00000007896si:ch1073-335m2.28878.035ENSGACG00000001176si:ch1073-335m2.29778.035Gasterosteus_aculeatus
ENSLOCG00000007896si:ch1073-335m2.210053.505ENSGACG00000005341-10052.294Gasterosteus_aculeatus
ENSLOCG00000007896si:ch1073-335m2.210078.278ENSGAGG00000020785SPEN10078.278Gopherus_agassizii
ENSLOCG00000007896si:ch1073-335m2.29785.517ENSHBUG00000020626-9785.517Haplochromis_burtoni
ENSLOCG00000007896si:ch1073-335m2.28581.977ENSHBUG00000023253si:ch1073-335m2.27981.977Haplochromis_burtoni
ENSLOCG00000007896si:ch1073-335m2.27265.148ENSHGLG00000019259SPEN7464.970Heterocephalus_glaber_female
ENSLOCG00000007896si:ch1073-335m2.26865.729ENSHGLG00100019294SPEN7665.601Heterocephalus_glaber_male
ENSLOCG00000007896si:ch1073-335m2.28679.845ENSHCOG00000006004si:ch1073-335m2.29979.845Hippocampus_comes
ENSLOCG00000007896si:ch1073-335m2.29883.448ENSIPUG00000021668spen9783.448Ictalurus_punctatus
ENSLOCG00000007896si:ch1073-335m2.28878.613ENSIPUG00000018212si:ch1073-335m2.29378.613Ictalurus_punctatus
ENSLOCG00000007896si:ch1073-335m2.29055.672ENSSTOG00000021428SPEN10051.443Ictidomys_tridecemlineatus
ENSLOCG00000007896si:ch1073-335m2.210052.751ENSJJAG00000010882Spen9952.609Jaculus_jaculus
ENSLOCG00000007896si:ch1073-335m2.29883.448ENSKMAG00000003882-9683.448Kryptolebias_marmoratus
ENSLOCG00000007896si:ch1073-335m2.29281.977ENSKMAG00000021725si:ch1073-335m2.25281.977Kryptolebias_marmoratus
ENSLOCG00000007896si:ch1073-335m2.28650.584ENSLBEG00000019129-10049.233Labrus_bergylta
ENSLOCG00000007896si:ch1073-335m2.29768.075ENSLBEG00000020855si:ch1073-335m2.25479.412Labrus_bergylta
ENSLOCG00000007896si:ch1073-335m2.29969.397ENSLACG00000003258SPEN10088.957Latimeria_chalumnae
ENSLOCG00000007896si:ch1073-335m2.29953.838ENSLAFG00000004524SPEN9752.349Loxodonta_africana
ENSLOCG00000007896si:ch1073-335m2.29256.924ENSMFAG00000041974SPEN9754.237Macaca_fascicularis
ENSLOCG00000007896si:ch1073-335m2.29257.004ENSMMUG00000008026SPEN9754.309Macaca_mulatta
ENSLOCG00000007896si:ch1073-335m2.29256.981ENSMNEG00000042402SPEN9754.290Macaca_nemestrina
ENSLOCG00000007896si:ch1073-335m2.29256.013ENSMLEG00000039293SPEN9652.897Mandrillus_leucophaeus
ENSLOCG00000007896si:ch1073-335m2.29382.738ENSMAMG00000023870si:ch1073-335m2.25282.738Mastacembelus_armatus
ENSLOCG00000007896si:ch1073-335m2.28581.977ENSMZEG00005011762si:ch1073-335m2.25381.977Maylandia_zebra
ENSLOCG00000007896si:ch1073-335m2.29153.108ENSMZEG00005021491-9952.320Maylandia_zebra
ENSLOCG00000007896si:ch1073-335m2.29658.981ENSMAUG00000008318Spen9261.737Mesocricetus_auratus
ENSLOCG00000007896si:ch1073-335m2.210053.882ENSMICG00000030994SPEN9753.768Microcebus_murinus
ENSLOCG00000007896si:ch1073-335m2.29951.709ENSMOCG00000016083Spen9751.331Microtus_ochrogaster
ENSLOCG00000007896si:ch1073-335m2.29963.953ENSMMOG00000021742si:ch1073-335m2.210063.953Mola_mola
ENSLOCG00000007896si:ch1073-335m2.210054.623ENSMODG00000003411SPEN10054.299Monodelphis_domestica
ENSLOCG00000007896si:ch1073-335m2.29785.517ENSMALG00000008625-9785.517Monopterus_albus
ENSLOCG00000007896si:ch1073-335m2.29952.068ENSMUSG00000040761Spen9751.728Mus_musculus
ENSLOCG00000007896si:ch1073-335m2.29952.520MGP_PahariEiJ_G0029076Spen9752.315Mus_pahari
ENSLOCG00000007896si:ch1073-335m2.29952.241MGP_SPRETEiJ_G0027724Spen9752.089Mus_spretus
ENSLOCG00000007896si:ch1073-335m2.29853.134ENSMPUG00000016317SPEN10051.887Mustela_putorius_furo
ENSLOCG00000007896si:ch1073-335m2.29286.170ENSMLUG00000010144SPEN9786.170Myotis_lucifugus
ENSLOCG00000007896si:ch1073-335m2.29657.478ENSNGAG00000000641Spen9856.596Nannospalax_galili
ENSLOCG00000007896si:ch1073-335m2.28651.431ENSNBRG00000022090-10050.565Neolamprologus_brichardi
ENSLOCG00000007896si:ch1073-335m2.28981.977ENSNBRG00000005733si:ch1073-335m2.25381.977Neolamprologus_brichardi
ENSLOCG00000007896si:ch1073-335m2.29953.746ENSNLEG00000007652SPEN9653.405Nomascus_leucogenys
ENSLOCG00000007896si:ch1073-335m2.28884.536ENSMEUG00000002422SPEN8984.536Notamacropus_eugenii
ENSLOCG00000007896si:ch1073-335m2.28367.157ENSOPRG00000015800SPEN8966.973Ochotona_princeps
ENSLOCG00000007896si:ch1073-335m2.210051.298ENSODEG00000016644SPEN10050.786Octodon_degus
ENSLOCG00000007896si:ch1073-335m2.210054.700ENSONIG00000006573-9976.588Oreochromis_niloticus
ENSLOCG00000007896si:ch1073-335m2.29952.090ENSOCUG00000010840SPEN9752.220Oryctolagus_cuniculus
ENSLOCG00000007896si:ch1073-335m2.28947.247ENSORLG00000028894-10046.557Oryzias_latipes
ENSLOCG00000007896si:ch1073-335m2.28881.395ENSORLG00000018414si:ch1073-335m2.29865.812Oryzias_latipes
ENSLOCG00000007896si:ch1073-335m2.28881.395ENSORLG00020009351si:ch1073-335m2.27665.812Oryzias_latipes_hni
ENSLOCG00000007896si:ch1073-335m2.28947.751ENSORLG00020007735-10046.845Oryzias_latipes_hni
ENSLOCG00000007896si:ch1073-335m2.29884.828ENSORLG00015022085-9784.828Oryzias_latipes_hsok
ENSLOCG00000007896si:ch1073-335m2.28880.814ENSORLG00015005537si:ch1073-335m2.29280.368Oryzias_latipes_hsok
ENSLOCG00000007896si:ch1073-335m2.29884.138ENSOMEG00000007639-9684.138Oryzias_melastigma
ENSLOCG00000007896si:ch1073-335m2.29281.098ENSOMEG00000004509si:ch1073-335m2.25680.606Oryzias_melastigma
ENSLOCG00000007896si:ch1073-335m2.29953.472ENSOARG00000008477SPEN9752.998Ovis_aries
ENSLOCG00000007896si:ch1073-335m2.29256.134ENSPANG00000006293SPEN9753.004Papio_anubis
ENSLOCG00000007896si:ch1073-335m2.294100.000ENSPKIG00000010492si:ch1073-335m2.296100.000Paramormyrops_kingsleyae
ENSLOCG00000007896si:ch1073-335m2.210059.371ENSPKIG00000002617SPEN10059.026Paramormyrops_kingsleyae
ENSLOCG00000007896si:ch1073-335m2.29955.795ENSPSIG00000008026SPEN10055.202Pelodiscus_sinensis
ENSLOCG00000007896si:ch1073-335m2.28854.901ENSPEMG00000022997Spen8654.218Peromyscus_maniculatus_bairdii
ENSLOCG00000007896si:ch1073-335m2.29375.862ENSPFOG00000017986si:ch1073-335m2.210073.529Poecilia_formosa
ENSLOCG00000007896si:ch1073-335m2.28975.862ENSPLAG00000016625si:ch1073-335m2.210073.529Poecilia_latipinna
ENSLOCG00000007896si:ch1073-335m2.29375.862ENSPMEG00000002674si:ch1073-335m2.210073.529Poecilia_mexicana
ENSLOCG00000007896si:ch1073-335m2.29784.138ENSPMEG00000006764-9784.138Poecilia_mexicana
ENSLOCG00000007896si:ch1073-335m2.29784.138ENSPREG00000010399-9784.138Poecilia_reticulata
ENSLOCG00000007896si:ch1073-335m2.29675.862ENSPREG00000005357si:ch1073-335m2.210044.948Poecilia_reticulata
ENSLOCG00000007896si:ch1073-335m2.28773.413ENSPCAG00000009543SPEN8866.221Procavia_capensis
ENSLOCG00000007896si:ch1073-335m2.210051.261ENSPCOG00000021735SPEN10051.261Propithecus_coquereli
ENSLOCG00000007896si:ch1073-335m2.27667.920ENSPVAG00000013794SPEN7567.801Pteropus_vampyrus
ENSLOCG00000007896si:ch1073-335m2.29785.517ENSPNYG00000012379-9785.517Pundamilia_nyererei
ENSLOCG00000007896si:ch1073-335m2.28581.977ENSPNYG00000009042si:ch1073-335m2.25381.977Pundamilia_nyererei
ENSLOCG00000007896si:ch1073-335m2.29283.237ENSPNAG00000011452si:ch1073-335m2.29983.237Pygocentrus_nattereri
ENSLOCG00000007896si:ch1073-335m2.29785.517ENSPNAG00000020795spen9785.517Pygocentrus_nattereri
ENSLOCG00000007896si:ch1073-335m2.29951.845ENSRNOG00000033556Spen9851.428Rattus_norvegicus
ENSLOCG00000007896si:ch1073-335m2.26655.326ENSRBIG00000039654SPEN9653.695Rhinopithecus_bieti
ENSLOCG00000007896si:ch1073-335m2.29766.225ENSSBOG00000028770SPEN9666.225Saimiri_boliviensis_boliviensis
ENSLOCG00000007896si:ch1073-335m2.29954.619ENSSHAG00000004960SPEN9975.000Sarcophilus_harrisii
ENSLOCG00000007896si:ch1073-335m2.29977.515ENSSFOG00015010267si:ch1073-335m2.210060.808Scleropages_formosus
ENSLOCG00000007896si:ch1073-335m2.28865.741ENSSFOG00015007131si:ch1073-335m2.210062.161Scleropages_formosus
ENSLOCG00000007896si:ch1073-335m2.29784.138ENSSMAG00000008996-9784.138Scophthalmus_maximus
ENSLOCG00000007896si:ch1073-335m2.26776.552ENSSMAG00000000125si:ch1073-335m2.210073.301Scophthalmus_maximus
ENSLOCG00000007896si:ch1073-335m2.29576.552ENSSDUG00000008416si:ch1073-335m2.210057.419Seriola_dumerili
ENSLOCG00000007896si:ch1073-335m2.29785.517ENSSDUG00000003476-9785.517Seriola_dumerili
ENSLOCG00000007896si:ch1073-335m2.29576.552ENSSLDG00000023347si:ch1073-335m2.210057.419Seriola_lalandi_dorsalis
ENSLOCG00000007896si:ch1073-335m2.29785.517ENSSLDG00000012950-9785.517Seriola_lalandi_dorsalis
ENSLOCG00000007896si:ch1073-335m2.28992.593ENSSPUG00000001866-10092.593Sphenodon_punctatus
ENSLOCG00000007896si:ch1073-335m2.29786.207ENSSPAG00000006014-9786.207Stegastes_partitus
ENSLOCG00000007896si:ch1073-335m2.29183.140ENSSPAG00000012454si:ch1073-335m2.29983.140Stegastes_partitus
ENSLOCG00000007896si:ch1073-335m2.28553.359ENSSSCG00000034484SPEN9953.134Sus_scrofa
ENSLOCG00000007896si:ch1073-335m2.29884.828ENSTRUG00000024350-9784.828Takifugu_rubripes
ENSLOCG00000007896si:ch1073-335m2.29677.094ENSTNIG00000010907-9977.065Tetraodon_nigroviridis
ENSLOCG00000007896si:ch1073-335m2.29770.616ENSTNIG00000014666si:ch1073-335m2.29981.395Tetraodon_nigroviridis
ENSLOCG00000007896si:ch1073-335m2.27182.000ENSTBEG00000003628SPEN7082.000Tupaia_belangeri
ENSLOCG00000007896si:ch1073-335m2.27880.095ENSTTRG00000015704SPEN7378.899Tursiops_truncatus
ENSLOCG00000007896si:ch1073-335m2.29954.039ENSUAMG00000009600SPEN10052.598Ursus_americanus
ENSLOCG00000007896si:ch1073-335m2.27064.595ENSUMAG00000021641SPEN10050.890Ursus_maritimus
ENSLOCG00000007896si:ch1073-335m2.292100.000ENSVVUG00000028951SPEN96100.000Vulpes_vulpes
ENSLOCG00000007896si:ch1073-335m2.210050.376ENSXETG00000023114SPEN9049.203Xenopus_tropicalis
ENSLOCG00000007896si:ch1073-335m2.28973.171ENSXCOG00000004516si:ch1073-335m2.210073.171Xiphophorus_couchianus
ENSLOCG00000007896si:ch1073-335m2.29784.828ENSXMAG00000021384-9784.828Xiphophorus_maculatus
ENSLOCG00000007896si:ch1073-335m2.28975.862ENSXMAG00000029887si:ch1073-335m2.210073.529Xiphophorus_maculatus

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