EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLOCG00000007933 (Gene tree)
Gene ID: 102690344
Gene Symbol: ssb
Alias: wu:fb17f11
Full Name: Sjogren syndrome antigen B
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 8606 bases
Position: chrLG12:17048508-17057113
Accession: 102690344
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000009647	RRM_1	PF00076.22	2.4e-13	1	1
ENSLOCP00000009634	RRM_1	PF00076.22	2.8e-13	1	1
ENSLOCP00000009647	RRM_3	PF08777.11	9.4e-31	1	1
ENSLOCP00000009634	RRM_3	PF08777.11	1.3e-30	1	1
ENSLOCP00000009647	La	PF05383.17	3.7e-21	1	1
ENSLOCP00000009634	La	PF05383.17	4e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000009658	-	3785	XM_006636600	ENSLOCP00000009647	406 (aa)	XP_006636663	W5MMN8
ENSLOCT00000009645	-	3851	-	ENSLOCP00000009634	428 (aa)	-	W5MMM5

Gene Model

Click here to download ENSLOCG00000007933's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000007933's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000007933	ssb	99	66.749	ENSG00000138385	SSB	100	72.500	Homo_sapiens
ENSLOCG00000007933	ssb	99	64.516	ENSAPOG00000003448	ssb	95	68.579	Acanthochromis_polyacanthus
ENSLOCG00000007933	ssb	99	64.251	ENSAMEG00000010507	SSB	98	64.251	Ailuropoda_melanoleuca
ENSLOCG00000007933	ssb	91	65.591	ENSACIG00000001738	ssb	98	64.456	Amphilophus_citrinellus
ENSLOCG00000007933	ssb	99	65.012	ENSAOCG00000020398	ssb	95	69.126	Amphiprion_ocellaris
ENSLOCG00000007933	ssb	99	65.012	ENSAPEG00000020395	ssb	95	69.126	Amphiprion_percula
ENSLOCG00000007933	ssb	99	66.585	ENSATEG00000016884	ssb	100	66.585	Anabas_testudineus
ENSLOCG00000007933	ssb	98	64.578	ENSAPLG00000006109	SSB	97	64.251	Anas_platyrhynchos
ENSLOCG00000007933	ssb	99	63.210	ENSACAG00000017008	SSB	97	63.930	Anolis_carolinensis
ENSLOCG00000007933	ssb	99	59.352	ENSANAG00000027195	-	98	59.352	Aotus_nancymaae
ENSLOCG00000007933	ssb	99	63.054	ENSACLG00000010798	ssb	100	63.054	Astatotilapia_calliptera
ENSLOCG00000007933	ssb	98	64.198	ENSAMXG00000012606	ssb	99	64.938	Astyanax_mexicanus
ENSLOCG00000007933	ssb	99	67.581	ENSBTAG00000008716	SSB	98	67.082	Bos_taurus
ENSLOCG00000007933	ssb	73	34.653	WBGene00016653	C44E4.4	76	35.974	Caenorhabditis_elegans
ENSLOCG00000007933	ssb	99	66.833	ENSCJAG00000045073	SSB	98	66.584	Callithrix_jacchus
ENSLOCG00000007933	ssb	99	66.584	ENSCAFG00000012418	SSB	98	66.085	Canis_familiaris
ENSLOCG00000007933	ssb	99	66.584	ENSCAFG00020002900	SSB	98	66.085	Canis_lupus_dingo
ENSLOCG00000007933	ssb	99	63.591	ENSCHIG00000022196	-	98	61.845	Capra_hircus
ENSLOCG00000007933	ssb	99	67.830	ENSCHIG00000022624	-	98	67.332	Capra_hircus
ENSLOCG00000007933	ssb	98	67.750	ENSTSYG00000000097	SSB	98	67.250	Carlito_syrichta
ENSLOCG00000007933	ssb	99	68.080	ENSCPOG00000003338	SSB	98	67.581	Cavia_porcellus
ENSLOCG00000007933	ssb	99	67.581	ENSCCAG00000035147	SSB	98	67.332	Cebus_capucinus
ENSLOCG00000007933	ssb	99	51.372	ENSCATG00000042909	-	97	50.873	Cercocebus_atys
ENSLOCG00000007933	ssb	72	65.068	ENSCATG00000036701	SSB	83	64.726	Cercocebus_atys
ENSLOCG00000007933	ssb	99	67.082	ENSCLAG00000015617	-	98	66.584	Chinchilla_lanigera
ENSLOCG00000007933	ssb	97	61.616	ENSCSAG00000018390	-	98	61.111	Chlorocebus_sabaeus
ENSLOCG00000007933	ssb	99	67.082	ENSCSAG00000015200	SSB	87	66.833	Chlorocebus_sabaeus
ENSLOCG00000007933	ssb	99	67.830	ENSCHOG00000007763	SSB	98	67.332	Choloepus_hoffmanni
ENSLOCG00000007933	ssb	98	71.216	ENSCPBG00000006519	SSB	97	71.322	Chrysemys_picta_bellii
ENSLOCG00000007933	ssb	99	58.209	ENSCANG00000033240	-	98	57.711	Colobus_angolensis_palliatus
ENSLOCG00000007933	ssb	99	67.332	ENSCANG00000027695	SSB	98	67.082	Colobus_angolensis_palliatus
ENSLOCG00000007933	ssb	94	54.047	ENSCANG00000028838	-	91	53.525	Colobus_angolensis_palliatus
ENSLOCG00000007933	ssb	99	59.506	ENSCGRG00001024831	Ssb	98	59.506	Cricetulus_griseus_chok1gshd
ENSLOCG00000007933	ssb	99	59.506	ENSCGRG00000005387	Ssb	98	59.506	Cricetulus_griseus_crigri
ENSLOCG00000007933	ssb	99	64.198	ENSCSEG00000011599	ssb	99	64.198	Cynoglossus_semilaevis
ENSLOCG00000007933	ssb	99	66.176	ENSCVAG00000021558	ssb	100	66.422	Cyprinodon_variegatus
ENSLOCG00000007933	ssb	99	65.764	ENSDARG00000029252	ssb	100	66.010	Danio_rerio
ENSLOCG00000007933	ssb	99	67.332	ENSDNOG00000013450	SSB	98	66.833	Dasypus_novemcinctus
ENSLOCG00000007933	ssb	99	61.084	ENSDORG00000005543	Ssb	98	60.345	Dipodomys_ordii
ENSLOCG00000007933	ssb	83	34.078	FBgn0011638	La	67	37.269	Drosophila_melanogaster
ENSLOCG00000007933	ssb	50	72.139	ENSETEG00000004614	-	52	72.139	Echinops_telfairi
ENSLOCG00000007933	ssb	97	47.342	ENSEBUG00000001237	ssb	96	47.342	Eptatretus_burgeri
ENSLOCG00000007933	ssb	99	67.830	ENSEASG00005022835	SSB	98	67.332	Equus_asinus_asinus
ENSLOCG00000007933	ssb	99	67.830	ENSECAG00000018495	SSB	98	67.332	Equus_caballus
ENSLOCG00000007933	ssb	74	55.853	ENSEEUG00000008077	SSB	76	55.853	Erinaceus_europaeus
ENSLOCG00000007933	ssb	99	70.075	ENSELUG00000020929	ssb	99	70.075	Esox_lucius
ENSLOCG00000007933	ssb	99	66.833	ENSFCAG00000011601	SSB	98	66.334	Felis_catus
ENSLOCG00000007933	ssb	98	67.839	ENSFALG00000000930	SSB	97	67.588	Ficedula_albicollis
ENSLOCG00000007933	ssb	99	67.830	ENSFDAG00000000598	SSB	98	67.332	Fukomys_damarensis
ENSLOCG00000007933	ssb	72	64.883	ENSFHEG00000003268	ssb	99	62.617	Fundulus_heteroclitus
ENSLOCG00000007933	ssb	98	61.671	ENSGMOG00000002664	ssb	100	60.688	Gadus_morhua
ENSLOCG00000007933	ssb	98	68.672	ENSGALG00000009677	SSB	97	66.667	Gallus_gallus
ENSLOCG00000007933	ssb	99	65.526	ENSGAFG00000002749	ssb	100	65.770	Gambusia_affinis
ENSLOCG00000007933	ssb	99	61.743	ENSGACG00000005107	ssb	100	61.501	Gasterosteus_aculeatus
ENSLOCG00000007933	ssb	98	71.216	ENSGAGG00000007807	SSB	97	71.322	Gopherus_agassizii
ENSLOCG00000007933	ssb	55	64.159	ENSGGOG00000023471	-	97	57.471	Gorilla_gorilla
ENSLOCG00000007933	ssb	99	57.673	ENSGGOG00000024891	-	98	56.824	Gorilla_gorilla
ENSLOCG00000007933	ssb	99	63.300	ENSHBUG00000006584	ssb	100	63.300	Haplochromis_burtoni
ENSLOCG00000007933	ssb	99	58.853	ENSHGLG00000005832	-	98	58.354	Heterocephalus_glaber_female
ENSLOCG00000007933	ssb	99	66.830	ENSHGLG00000017580	-	98	66.585	Heterocephalus_glaber_female
ENSLOCG00000007933	ssb	99	61.538	ENSHGLG00000004478	-	98	61.042	Heterocephalus_glaber_female
ENSLOCG00000007933	ssb	99	58.853	ENSHGLG00100008767	-	98	58.105	Heterocephalus_glaber_male
ENSLOCG00000007933	ssb	99	66.830	ENSHGLG00100003084	-	98	66.585	Heterocephalus_glaber_male
ENSLOCG00000007933	ssb	98	63.092	ENSHCOG00000019011	ssb	99	63.591	Hippocampus_comes
ENSLOCG00000007933	ssb	98	66.832	ENSIPUG00000003681	SSB	99	66.832	Ictalurus_punctatus
ENSLOCG00000007933	ssb	99	67.332	ENSSTOG00000008416	SSB	98	66.833	Ictidomys_tridecemlineatus
ENSLOCG00000007933	ssb	99	57.416	ENSJJAG00000023158	-	98	57.177	Jaculus_jaculus
ENSLOCG00000007933	ssb	89	51.381	ENSJJAG00000016250	-	94	50.552	Jaculus_jaculus
ENSLOCG00000007933	ssb	99	67.076	ENSKMAG00000017317	ssb	100	67.076	Kryptolebias_marmoratus
ENSLOCG00000007933	ssb	99	64.764	ENSLBEG00000017345	ssb	99	64.764	Labrus_bergylta
ENSLOCG00000007933	ssb	98	66.334	ENSLACG00000014056	SSB	97	66.085	Latimeria_chalumnae
ENSLOCG00000007933	ssb	98	56.892	ENSLAFG00000028909	-	97	56.423	Loxodonta_africana
ENSLOCG00000007933	ssb	73	51.014	ENSLAFG00000026721	-	98	51.014	Loxodonta_africana
ENSLOCG00000007933	ssb	99	63.462	ENSLAFG00000000867	-	98	63.221	Loxodonta_africana
ENSLOCG00000007933	ssb	86	58.523	ENSMFAG00000041478	-	89	61.371	Macaca_fascicularis
ENSLOCG00000007933	ssb	99	67.332	ENSMFAG00000039066	SSB	98	67.082	Macaca_fascicularis
ENSLOCG00000007933	ssb	99	48.878	ENSMMUG00000039889	-	98	48.628	Macaca_mulatta
ENSLOCG00000007933	ssb	99	67.332	ENSMMUG00000023051	SSB	98	67.082	Macaca_mulatta
ENSLOCG00000007933	ssb	99	56.716	ENSMMUG00000011724	-	95	55.970	Macaca_mulatta
ENSLOCG00000007933	ssb	99	57.426	ENSMNEG00000028321	SSB	98	57.673	Macaca_nemestrina
ENSLOCG00000007933	ssb	86	58.523	ENSMNEG00000034698	-	89	61.371	Macaca_nemestrina
ENSLOCG00000007933	ssb	99	67.332	ENSMLEG00000035717	SSB	98	67.082	Mandrillus_leucophaeus
ENSLOCG00000007933	ssb	99	47.512	ENSMLEG00000042644	-	98	46.766	Mandrillus_leucophaeus
ENSLOCG00000007933	ssb	99	66.830	ENSMAMG00000004800	ssb	100	66.830	Mastacembelus_armatus
ENSLOCG00000007933	ssb	99	63.054	ENSMZEG00005005749	ssb	100	63.054	Maylandia_zebra
ENSLOCG00000007933	ssb	98	68.922	ENSMGAG00000010328	SSB	97	71.357	Meleagris_gallopavo
ENSLOCG00000007933	ssb	99	67.830	ENSMICG00000028252	-	98	67.332	Microcebus_murinus
ENSLOCG00000007933	ssb	97	60.354	ENSMICG00000033304	-	93	63.587	Microcebus_murinus
ENSLOCG00000007933	ssb	99	63.415	ENSMODG00000008227	-	98	63.902	Monodelphis_domestica
ENSLOCG00000007933	ssb	99	53.367	ENSMODG00000007027	-	97	53.117	Monodelphis_domestica
ENSLOCG00000007933	ssb	99	54.000	ENSMODG00000019271	-	97	55.250	Monodelphis_domestica
ENSLOCG00000007933	ssb	89	67.857	ENSMALG00000008045	ssb	99	63.260	Monopterus_albus
ENSLOCG00000007933	ssb	99	58.654	MGP_CAROLIEiJ_G0023629	-	97	68.539	Mus_caroli
ENSLOCG00000007933	ssb	99	57.933	ENSMUSG00000068882	Ssb	97	68.539	Mus_musculus
ENSLOCG00000007933	ssb	99	57.757	MGP_PahariEiJ_G0025081	-	97	67.416	Mus_pahari
ENSLOCG00000007933	ssb	99	57.933	MGP_SPRETEiJ_G0024551	Ssb	97	68.539	Mus_spretus
ENSLOCG00000007933	ssb	99	67.581	ENSMPUG00000000785	SSB	98	67.082	Mustela_putorius_furo
ENSLOCG00000007933	ssb	99	64.762	ENSMLUG00000016316	SSB	99	64.524	Myotis_lucifugus
ENSLOCG00000007933	ssb	99	63.054	ENSNBRG00000012661	ssb	100	63.054	Neolamprologus_brichardi
ENSLOCG00000007933	ssb	99	67.082	ENSNLEG00000004958	SSB	98	66.833	Nomascus_leucogenys
ENSLOCG00000007933	ssb	82	54.217	ENSNLEG00000028754	-	76	55.140	Nomascus_leucogenys
ENSLOCG00000007933	ssb	61	73.790	ENSMEUG00000001650	-	100	73.790	Notamacropus_eugenii
ENSLOCG00000007933	ssb	51	69.677	ENSOPRG00000008475	-	72	69.677	Ochotona_princeps
ENSLOCG00000007933	ssb	93	65.172	ENSODEG00000004202	-	99	63.852	Octodon_degus
ENSLOCG00000007933	ssb	99	64.039	ENSONIG00000008776	ssb	100	64.039	Oreochromis_niloticus
ENSLOCG00000007933	ssb	97	67.424	ENSOANG00000008543	SSB	97	68.182	Ornithorhynchus_anatinus
ENSLOCG00000007933	ssb	99	67.332	ENSOCUG00000010396	SSB	98	67.082	Oryctolagus_cuniculus
ENSLOCG00000007933	ssb	99	63.145	ENSORLG00000017208	ssb	100	62.899	Oryzias_latipes
ENSLOCG00000007933	ssb	99	63.145	ENSORLG00020022574	ssb	100	62.899	Oryzias_latipes_hni
ENSLOCG00000007933	ssb	99	63.636	ENSORLG00015016592	ssb	100	63.391	Oryzias_latipes_hsok
ENSLOCG00000007933	ssb	99	66.915	ENSOMEG00000003193	ssb	99	66.915	Oryzias_melastigma
ENSLOCG00000007933	ssb	99	63.309	ENSOGAG00000029768	SSB	98	63.070	Otolemur_garnettii
ENSLOCG00000007933	ssb	99	68.080	ENSOARG00000002906	SSB	98	67.581	Ovis_aries
ENSLOCG00000007933	ssb	99	66.749	ENSPPAG00000042673	SSB	98	66.501	Pan_paniscus
ENSLOCG00000007933	ssb	91	54.545	ENSPPAG00000006189	-	95	54.011	Pan_paniscus
ENSLOCG00000007933	ssb	99	56.436	ENSPPAG00000032427	-	97	63.200	Pan_paniscus
ENSLOCG00000007933	ssb	99	66.833	ENSPPRG00000006599	SSB	98	66.334	Panthera_pardus
ENSLOCG00000007933	ssb	99	66.833	ENSPTIG00000011021	SSB	95	66.334	Panthera_tigris_altaica
ENSLOCG00000007933	ssb	99	66.749	ENSPTRG00000012620	SSB	98	66.501	Pan_troglodytes
ENSLOCG00000007933	ssb	99	53.350	ENSPTRG00000042880	-	98	52.854	Pan_troglodytes
ENSLOCG00000007933	ssb	99	67.332	ENSPANG00000007440	SSB	98	67.082	Papio_anubis
ENSLOCG00000007933	ssb	94	46.736	ENSPANG00000031877	-	90	46.736	Papio_anubis
ENSLOCG00000007933	ssb	99	49.626	ENSPANG00000034126	-	97	49.875	Papio_anubis
ENSLOCG00000007933	ssb	99	75.682	ENSPKIG00000019325	ssb	99	76.179	Paramormyrops_kingsleyae
ENSLOCG00000007933	ssb	98	70.471	ENSPSIG00000002265	SSB	91	70.574	Pelodiscus_sinensis
ENSLOCG00000007933	ssb	85	60.172	ENSPMGG00000020075	ssb	95	58.127	Periophthalmus_magnuspinnatus
ENSLOCG00000007933	ssb	98	48.244	ENSPMAG00000002982	ssb	99	48.244	Petromyzon_marinus
ENSLOCG00000007933	ssb	99	66.085	ENSPCIG00000028591	-	98	66.833	Phascolarctos_cinereus
ENSLOCG00000007933	ssb	99	65.602	ENSPFOG00000009650	ssb	100	65.602	Poecilia_formosa
ENSLOCG00000007933	ssb	99	65.356	ENSPLAG00000020498	ssb	100	65.770	Poecilia_latipinna
ENSLOCG00000007933	ssb	99	65.848	ENSPMEG00000001051	ssb	100	65.848	Poecilia_mexicana
ENSLOCG00000007933	ssb	90	67.568	ENSPREG00000003708	ssb	97	67.568	Poecilia_reticulata
ENSLOCG00000007933	ssb	99	67.082	ENSPPYG00000012919	SSB	98	66.833	Pongo_abelii
ENSLOCG00000007933	ssb	95	64.675	ENSPCAG00000010276	SSB	99	64.675	Procavia_capensis
ENSLOCG00000007933	ssb	99	59.601	ENSPCOG00000023189	-	98	59.102	Propithecus_coquereli
ENSLOCG00000007933	ssb	99	65.087	ENSPCOG00000015741	-	98	64.589	Propithecus_coquereli
ENSLOCG00000007933	ssb	87	69.209	ENSPVAG00000006615	SSB	99	68.466	Pteropus_vampyrus
ENSLOCG00000007933	ssb	99	63.300	ENSPNYG00000006444	ssb	100	63.300	Pundamilia_nyererei
ENSLOCG00000007933	ssb	98	64.851	ENSPNAG00000011708	ssb	99	65.099	Pygocentrus_nattereri
ENSLOCG00000007933	ssb	99	58.809	ENSRNOG00000011606	AABR07061825.1	98	58.561	Rattus_norvegicus
ENSLOCG00000007933	ssb	99	58.173	ENSRNOG00000007998	Ssb	98	56.490	Rattus_norvegicus
ENSLOCG00000007933	ssb	89	61.264	ENSRBIG00000041608	-	97	60.714	Rhinopithecus_bieti
ENSLOCG00000007933	ssb	94	57.592	ENSRBIG00000041232	-	98	57.330	Rhinopithecus_bieti
ENSLOCG00000007933	ssb	99	50.000	ENSRBIG00000029918	-	97	49.502	Rhinopithecus_bieti
ENSLOCG00000007933	ssb	99	57.143	ENSRBIG00000041972	SSB	83	73.394	Rhinopithecus_bieti
ENSLOCG00000007933	ssb	99	55.721	ENSRROG00000007149	-	98	55.224	Rhinopithecus_roxellana
ENSLOCG00000007933	ssb	99	67.332	ENSRROG00000040346	SSB	98	67.082	Rhinopithecus_roxellana
ENSLOCG00000007933	ssb	98	57.393	ENSRROG00000031684	-	99	57.143	Rhinopithecus_roxellana
ENSLOCG00000007933	ssb	89	64.286	ENSRROG00000034102	-	94	61.499	Rhinopithecus_roxellana
ENSLOCG00000007933	ssb	99	67.332	ENSSBOG00000027204	SSB	98	67.082	Saimiri_boliviensis_boliviensis
ENSLOCG00000007933	ssb	99	65.586	ENSSHAG00000018062	SSB	98	66.334	Sarcophilus_harrisii
ENSLOCG00000007933	ssb	99	78.856	ENSSFOG00015000550	ssb	99	78.856	Scleropages_formosus
ENSLOCG00000007933	ssb	98	61.250	ENSSMAG00000013885	ssb	98	68.306	Scophthalmus_maximus
ENSLOCG00000007933	ssb	99	66.585	ENSSDUG00000020117	ssb	100	66.585	Seriola_dumerili
ENSLOCG00000007933	ssb	99	63.951	ENSSLDG00000002525	ssb	100	63.951	Seriola_lalandi_dorsalis
ENSLOCG00000007933	ssb	95	61.299	ENSSARG00000007747	SSB	99	60.260	Sorex_araneus
ENSLOCG00000007933	ssb	98	70.250	ENSSPUG00000012112	SSB	97	70.000	Sphenodon_punctatus
ENSLOCG00000007933	ssb	98	64.428	ENSSPAG00000005696	ssb	96	67.935	Stegastes_partitus
ENSLOCG00000007933	ssb	94	62.205	ENSSSCG00000015938	SSB	94	61.942	Sus_scrofa
ENSLOCG00000007933	ssb	98	67.750	ENSTGUG00000007942	SSB	97	67.500	Taeniopygia_guttata
ENSLOCG00000007933	ssb	99	65.025	ENSTRUG00000017839	ssb	100	65.271	Takifugu_rubripes
ENSLOCG00000007933	ssb	90	64.208	ENSTNIG00000000915	ssb	90	68.944	Tetraodon_nigroviridis
ENSLOCG00000007933	ssb	82	73.394	ENSTBEG00000009056	SSB	80	73.394	Tupaia_belangeri
ENSLOCG00000007933	ssb	99	67.082	ENSTTRG00000002152	SSB	98	66.584	Tursiops_truncatus
ENSLOCG00000007933	ssb	91	68.011	ENSUAMG00000027833	SSB	98	67.473	Ursus_americanus
ENSLOCG00000007933	ssb	99	66.833	ENSUMAG00000013907	SSB	98	66.334	Ursus_maritimus
ENSLOCG00000007933	ssb	99	67.082	ENSVPAG00000007183	SSB	98	66.584	Vicugna_pacos
ENSLOCG00000007933	ssb	99	66.584	ENSVVUG00000016573	SSB	76	66.085	Vulpes_vulpes
ENSLOCG00000007933	ssb	97	59.809	ENSXETG00000025402	ssb	97	59.809	Xenopus_tropicalis
ENSLOCG00000007933	ssb	90	65.583	ENSXCOG00000019109	ssb	97	65.583	Xiphophorus_couchianus
ENSLOCG00000007933	ssb	99	66.015	ENSXMAG00000004888	ssb	100	66.015	Xiphophorus_maculatus