EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLOCG00000008074 (Gene tree)
Gene ID: 102689404
Gene Symbol: clp1
Alias: fa28a12|wu:fa28a12
Full Name: cleavage and polyadenylation factor I subunit 1
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 5129 bases
Position: chrLG9:17062925-17068053
Accession: 102689404
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000009807	Clp1	PF06807.14	6.8e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000009818	-	2265	XM_006634148	ENSLOCP00000009807	322 (aa)	-	W5MN48

Gene Model

Click here to download ENSLOCG00000008074's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000008074's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000008074	clp1	100	77.640	ENSG00000172409	CLP1	73	76.708	Homo_sapiens
ENSLOCG00000008074	clp1	100	87.346	ENSAPOG00000008242	clp1	71	86.957	Acanthochromis_polyacanthus
ENSLOCG00000008074	clp1	100	77.640	ENSAMEG00000014551	CLP1	72	76.708	Ailuropoda_melanoleuca
ENSLOCG00000008074	clp1	100	86.025	ENSACIG00000006310	clp1	71	86.025	Amphilophus_citrinellus
ENSLOCG00000008074	clp1	100	87.346	ENSAOCG00000010681	clp1	73	86.957	Amphiprion_ocellaris
ENSLOCG00000008074	clp1	100	87.346	ENSAPEG00000012165	clp1	73	86.957	Amphiprion_percula
ENSLOCG00000008074	clp1	100	87.037	ENSATEG00000012374	clp1	71	86.646	Anabas_testudineus
ENSLOCG00000008074	clp1	100	77.640	ENSACAG00000007139	CLP1	73	77.019	Anolis_carolinensis
ENSLOCG00000008074	clp1	100	77.640	ENSANAG00000034935	CLP1	73	76.708	Aotus_nancymaae
ENSLOCG00000008074	clp1	100	85.404	ENSACLG00000013573	clp1	71	85.404	Astatotilapia_calliptera
ENSLOCG00000008074	clp1	100	88.199	ENSAMXG00000014194	clp1	74	88.199	Astyanax_mexicanus
ENSLOCG00000008074	clp1	100	77.640	ENSBTAG00000006493	CLP1	73	76.708	Bos_taurus
ENSLOCG00000008074	clp1	99	45.312	WBGene00010304	clpf-1	94	32.609	Caenorhabditis_elegans
ENSLOCG00000008074	clp1	100	77.640	ENSCJAG00000008748	CLP1	73	76.708	Callithrix_jacchus
ENSLOCG00000008074	clp1	100	77.640	ENSCAFG00000007815	CLP1	73	76.708	Canis_familiaris
ENSLOCG00000008074	clp1	100	77.640	ENSCAFG00020000903	CLP1	73	76.708	Canis_lupus_dingo
ENSLOCG00000008074	clp1	100	77.640	ENSCHIG00000023497	CLP1	73	77.019	Capra_hircus
ENSLOCG00000008074	clp1	100	77.640	ENSTSYG00000006824	CLP1	72	76.708	Carlito_syrichta
ENSLOCG00000008074	clp1	100	77.640	ENSCAPG00000009703	CLP1	73	76.708	Cavia_aperea
ENSLOCG00000008074	clp1	100	77.640	ENSCPOG00000012554	CLP1	74	76.708	Cavia_porcellus
ENSLOCG00000008074	clp1	100	77.329	ENSCCAG00000031957	CLP1	73	76.398	Cebus_capucinus
ENSLOCG00000008074	clp1	100	77.640	ENSCATG00000044628	CLP1	73	76.708	Cercocebus_atys
ENSLOCG00000008074	clp1	100	77.640	ENSCLAG00000004094	CLP1	73	76.708	Chinchilla_lanigera
ENSLOCG00000008074	clp1	100	77.640	ENSCSAG00000005994	CLP1	73	76.708	Chlorocebus_sabaeus
ENSLOCG00000008074	clp1	100	77.640	ENSCPBG00000016843	CLP1	73	77.019	Chrysemys_picta_bellii
ENSLOCG00000008074	clp1	100	60.248	ENSCING00000003779	-	72	60.248	Ciona_intestinalis
ENSLOCG00000008074	clp1	99	60.748	ENSCSAVG00000003437	-	73	60.748	Ciona_savignyi
ENSLOCG00000008074	clp1	100	77.640	ENSCANG00000034335	CLP1	73	76.708	Colobus_angolensis_palliatus
ENSLOCG00000008074	clp1	100	77.329	ENSCGRG00001002227	CLP1	73	76.398	Cricetulus_griseus_chok1gshd
ENSLOCG00000008074	clp1	100	77.329	ENSCGRG00000004328	CLP1	73	76.398	Cricetulus_griseus_crigri
ENSLOCG00000008074	clp1	100	84.259	ENSCSEG00000008614	clp1	71	83.851	Cynoglossus_semilaevis
ENSLOCG00000008074	clp1	100	86.646	ENSCVAG00000020101	clp1	76	86.646	Cyprinodon_variegatus
ENSLOCG00000008074	clp1	100	87.267	ENSDARG00000063663	clp1	71	86.025	Danio_rerio
ENSLOCG00000008074	clp1	99	77.570	ENSDNOG00000042415	CLP1	65	76.636	Dasypus_novemcinctus
ENSLOCG00000008074	clp1	100	77.640	ENSDORG00000014685	Clp1	73	76.708	Dipodomys_ordii
ENSLOCG00000008074	clp1	99	53.292	FBgn0033842	cbc	73	53.292	Drosophila_melanogaster
ENSLOCG00000008074	clp1	100	77.640	ENSETEG00000003009	CLP1	73	76.708	Echinops_telfairi
ENSLOCG00000008074	clp1	100	69.255	ENSEBUG00000011648	clp1	73	68.634	Eptatretus_burgeri
ENSLOCG00000008074	clp1	100	77.640	ENSEASG00005002093	CLP1	73	76.708	Equus_asinus_asinus
ENSLOCG00000008074	clp1	100	77.640	ENSECAG00000011597	CLP1	73	76.708	Equus_caballus
ENSLOCG00000008074	clp1	100	77.329	ENSEEUG00000012771	CLP1	73	76.398	Erinaceus_europaeus
ENSLOCG00000008074	clp1	100	89.130	ENSELUG00000024048	clp1	72	87.888	Esox_lucius
ENSLOCG00000008074	clp1	100	77.640	ENSFCAG00000006633	CLP1	73	76.708	Felis_catus
ENSLOCG00000008074	clp1	100	77.019	ENSFALG00000011145	CLP1	73	77.019	Ficedula_albicollis
ENSLOCG00000008074	clp1	100	77.640	ENSFDAG00000000234	CLP1	73	76.708	Fukomys_damarensis
ENSLOCG00000008074	clp1	100	86.646	ENSFHEG00000014760	CLP1	71	86.646	Fundulus_heteroclitus
ENSLOCG00000008074	clp1	100	88.889	ENSGMOG00000019340	clp1	72	88.509	Gadus_morhua
ENSLOCG00000008074	clp1	100	77.019	ENSGALG00000007370	CLP1	73	77.019	Gallus_gallus
ENSLOCG00000008074	clp1	100	85.714	ENSGAFG00000003020	clp1	72	85.714	Gambusia_affinis
ENSLOCG00000008074	clp1	100	87.037	ENSGACG00000017832	clp1	71	86.646	Gasterosteus_aculeatus
ENSLOCG00000008074	clp1	100	77.640	ENSGAGG00000013279	CLP1	73	77.019	Gopherus_agassizii
ENSLOCG00000008074	clp1	100	77.640	ENSGGOG00000023006	CLP1	73	76.708	Gorilla_gorilla
ENSLOCG00000008074	clp1	100	85.714	ENSHBUG00000010436	clp1	71	85.714	Haplochromis_burtoni
ENSLOCG00000008074	clp1	100	77.640	ENSHGLG00000009914	CLP1	73	76.708	Heterocephalus_glaber_female
ENSLOCG00000008074	clp1	100	77.640	ENSHGLG00100006105	CLP1	73	76.708	Heterocephalus_glaber_male
ENSLOCG00000008074	clp1	100	86.957	ENSHCOG00000010072	clp1	71	86.957	Hippocampus_comes
ENSLOCG00000008074	clp1	100	87.578	ENSIPUG00000016238	clp1	71	86.646	Ictalurus_punctatus
ENSLOCG00000008074	clp1	100	77.640	ENSSTOG00000029257	CLP1	73	76.708	Ictidomys_tridecemlineatus
ENSLOCG00000008074	clp1	100	77.329	ENSJJAG00000023691	Clp1	73	76.398	Jaculus_jaculus
ENSLOCG00000008074	clp1	100	86.646	ENSKMAG00000011990	clp1	71	86.646	Kryptolebias_marmoratus
ENSLOCG00000008074	clp1	100	87.346	ENSLBEG00000010201	clp1	71	86.957	Labrus_bergylta
ENSLOCG00000008074	clp1	100	77.019	ENSLACG00000003160	CLP1	73	77.019	Latimeria_chalumnae
ENSLOCG00000008074	clp1	100	77.329	ENSLAFG00000014907	CLP1	73	76.398	Loxodonta_africana
ENSLOCG00000008074	clp1	100	77.640	ENSMFAG00000046074	CLP1	73	76.708	Macaca_fascicularis
ENSLOCG00000008074	clp1	100	77.640	ENSMMUG00000038007	CLP1	72	76.708	Macaca_mulatta
ENSLOCG00000008074	clp1	100	77.640	ENSMNEG00000000259	CLP1	73	76.708	Macaca_nemestrina
ENSLOCG00000008074	clp1	100	77.640	ENSMLEG00000043556	CLP1	73	76.708	Mandrillus_leucophaeus
ENSLOCG00000008074	clp1	100	86.957	ENSMAMG00000002149	clp1	71	86.957	Mastacembelus_armatus
ENSLOCG00000008074	clp1	100	85.404	ENSMZEG00005002850	clp1	71	85.404	Maylandia_zebra
ENSLOCG00000008074	clp1	100	77.019	ENSMGAG00000009643	CLP1	73	77.019	Meleagris_gallopavo
ENSLOCG00000008074	clp1	100	77.329	ENSMAUG00000016261	Clp1	73	76.398	Mesocricetus_auratus
ENSLOCG00000008074	clp1	100	77.640	ENSMICG00000004895	CLP1	73	76.708	Microcebus_murinus
ENSLOCG00000008074	clp1	100	77.640	ENSMOCG00000005498	Clp1	73	76.708	Microtus_ochrogaster
ENSLOCG00000008074	clp1	100	85.802	ENSMMOG00000003229	clp1	71	85.404	Mola_mola
ENSLOCG00000008074	clp1	100	77.950	ENSMODG00000024148	-	73	77.019	Monodelphis_domestica
ENSLOCG00000008074	clp1	100	77.950	ENSMODG00000020107	-	73	77.019	Monodelphis_domestica
ENSLOCG00000008074	clp1	100	86.957	ENSMALG00000014239	clp1	71	86.957	Monopterus_albus
ENSLOCG00000008074	clp1	100	77.640	MGP_CAROLIEiJ_G0023726	Clp1	73	76.708	Mus_caroli
ENSLOCG00000008074	clp1	100	77.640	ENSMUSG00000027079	Clp1	73	76.708	Mus_musculus
ENSLOCG00000008074	clp1	100	77.640	MGP_PahariEiJ_G0025177	Clp1	73	76.708	Mus_pahari
ENSLOCG00000008074	clp1	100	77.640	MGP_SPRETEiJ_G0024646	Clp1	73	76.708	Mus_spretus
ENSLOCG00000008074	clp1	100	77.640	ENSMPUG00000000268	CLP1	73	76.708	Mustela_putorius_furo
ENSLOCG00000008074	clp1	100	77.640	ENSMLUG00000007904	CLP1	73	76.708	Myotis_lucifugus
ENSLOCG00000008074	clp1	100	77.329	ENSNGAG00000006165	Clp1	73	76.398	Nannospalax_galili
ENSLOCG00000008074	clp1	100	85.404	ENSNBRG00000005225	clp1	71	85.404	Neolamprologus_brichardi
ENSLOCG00000008074	clp1	81	70.611	ENSNLEG00000012809	-	78	69.466	Nomascus_leucogenys
ENSLOCG00000008074	clp1	100	77.640	ENSMEUG00000010949	CLP1	73	76.708	Notamacropus_eugenii
ENSLOCG00000008074	clp1	96	77.097	ENSOPRG00000007329	CLP1	100	76.129	Ochotona_princeps
ENSLOCG00000008074	clp1	100	77.640	ENSODEG00000011410	CLP1	73	76.708	Octodon_degus
ENSLOCG00000008074	clp1	100	85.093	ENSONIG00000005089	clp1	71	85.093	Oreochromis_niloticus
ENSLOCG00000008074	clp1	100	77.640	ENSOCUG00000007045	CLP1	73	76.708	Oryctolagus_cuniculus
ENSLOCG00000008074	clp1	100	84.472	ENSORLG00000003647	clp1	71	84.472	Oryzias_latipes
ENSLOCG00000008074	clp1	100	84.161	ENSORLG00020016676	clp1	71	84.161	Oryzias_latipes_hni
ENSLOCG00000008074	clp1	100	84.472	ENSORLG00015019484	clp1	71	84.472	Oryzias_latipes_hsok
ENSLOCG00000008074	clp1	100	85.093	ENSOMEG00000021303	clp1	71	85.093	Oryzias_melastigma
ENSLOCG00000008074	clp1	100	77.640	ENSOGAG00000004508	CLP1	73	76.708	Otolemur_garnettii
ENSLOCG00000008074	clp1	100	76.708	ENSOARG00000010145	CLP1	71	76.087	Ovis_aries
ENSLOCG00000008074	clp1	100	77.640	ENSPPAG00000041519	CLP1	73	76.708	Pan_paniscus
ENSLOCG00000008074	clp1	100	77.640	ENSPPRG00000006135	CLP1	73	76.708	Panthera_pardus
ENSLOCG00000008074	clp1	100	77.640	ENSPTIG00000015866	CLP1	73	76.708	Panthera_tigris_altaica
ENSLOCG00000008074	clp1	100	77.640	ENSPTRG00000047318	CLP1	73	76.708	Pan_troglodytes
ENSLOCG00000008074	clp1	100	77.640	ENSPANG00000017078	CLP1	71	76.708	Papio_anubis
ENSLOCG00000008074	clp1	100	90.683	ENSPKIG00000007697	clp1	72	90.683	Paramormyrops_kingsleyae
ENSLOCG00000008074	clp1	93	73.913	ENSPSIG00000005468	CLP1	71	73.244	Pelodiscus_sinensis
ENSLOCG00000008074	clp1	100	86.025	ENSPMGG00000012171	clp1	72	86.025	Periophthalmus_magnuspinnatus
ENSLOCG00000008074	clp1	100	77.640	ENSPEMG00000011213	-	73	76.708	Peromyscus_maniculatus_bairdii
ENSLOCG00000008074	clp1	100	68.634	ENSPMAG00000006707	clp1	73	68.634	Petromyzon_marinus
ENSLOCG00000008074	clp1	100	78.261	ENSPCIG00000011899	CLP1	73	77.329	Phascolarctos_cinereus
ENSLOCG00000008074	clp1	100	86.335	ENSPFOG00000008169	clp1	71	86.335	Poecilia_formosa
ENSLOCG00000008074	clp1	100	86.335	ENSPLAG00000022388	clp1	72	86.335	Poecilia_latipinna
ENSLOCG00000008074	clp1	100	86.335	ENSPMEG00000021088	clp1	72	86.335	Poecilia_mexicana
ENSLOCG00000008074	clp1	100	86.335	ENSPREG00000017802	clp1	71	86.335	Poecilia_reticulata
ENSLOCG00000008074	clp1	73	75.000	ENSPPYG00000003266	-	100	73.729	Pongo_abelii
ENSLOCG00000008074	clp1	100	77.640	ENSPCOG00000000360	CLP1	72	76.708	Propithecus_coquereli
ENSLOCG00000008074	clp1	100	77.640	ENSPVAG00000016270	CLP1	73	76.708	Pteropus_vampyrus
ENSLOCG00000008074	clp1	100	85.714	ENSPNYG00000017274	clp1	71	85.714	Pundamilia_nyererei
ENSLOCG00000008074	clp1	100	89.441	ENSPNAG00000026460	clp1	71	89.130	Pygocentrus_nattereri
ENSLOCG00000008074	clp1	100	77.640	ENSRNOG00000007416	Clp1	73	76.708	Rattus_norvegicus
ENSLOCG00000008074	clp1	100	77.640	ENSRBIG00000018191	CLP1	73	76.708	Rhinopithecus_bieti
ENSLOCG00000008074	clp1	100	77.640	ENSRROG00000039265	CLP1	73	76.708	Rhinopithecus_roxellana
ENSLOCG00000008074	clp1	100	64.907	ENSSBOG00000010558	-	75	64.907	Saimiri_boliviensis_boliviensis
ENSLOCG00000008074	clp1	100	77.640	ENSSBOG00000032517	-	73	76.708	Saimiri_boliviensis_boliviensis
ENSLOCG00000008074	clp1	100	77.950	ENSSHAG00000015695	CLP1	73	77.019	Sarcophilus_harrisii
ENSLOCG00000008074	clp1	100	91.667	ENSSFOG00015000628	clp1	73	90.712	Scleropages_formosus
ENSLOCG00000008074	clp1	100	86.728	ENSSMAG00000019423	clp1	71	86.335	Scophthalmus_maximus
ENSLOCG00000008074	clp1	100	87.654	ENSSDUG00000014495	clp1	71	87.267	Seriola_dumerili
ENSLOCG00000008074	clp1	100	87.346	ENSSLDG00000000937	clp1	71	86.957	Seriola_lalandi_dorsalis
ENSLOCG00000008074	clp1	73	74.894	ENSSARG00000002459	CLP1	100	73.617	Sorex_araneus
ENSLOCG00000008074	clp1	100	76.398	ENSSPUG00000016811	CLP1	73	76.398	Sphenodon_punctatus
ENSLOCG00000008074	clp1	100	87.037	ENSSPAG00000016052	clp1	71	86.646	Stegastes_partitus
ENSLOCG00000008074	clp1	100	77.640	ENSSSCG00000031442	CLP1	73	76.708	Sus_scrofa
ENSLOCG00000008074	clp1	100	77.019	ENSTGUG00000007002	CLP1	73	77.019	Taeniopygia_guttata
ENSLOCG00000008074	clp1	100	86.646	ENSTRUG00000012602	clp1	71	86.335	Takifugu_rubripes
ENSLOCG00000008074	clp1	100	86.335	ENSTNIG00000013125	clp1	71	86.025	Tetraodon_nigroviridis
ENSLOCG00000008074	clp1	100	77.019	ENSTBEG00000009975	CLP1	73	76.087	Tupaia_belangeri
ENSLOCG00000008074	clp1	100	77.329	ENSTTRG00000002096	CLP1	73	76.398	Tursiops_truncatus
ENSLOCG00000008074	clp1	100	77.640	ENSUAMG00000011388	CLP1	73	76.708	Ursus_americanus
ENSLOCG00000008074	clp1	100	77.640	ENSUMAG00000018317	CLP1	73	76.708	Ursus_maritimus
ENSLOCG00000008074	clp1	100	77.640	ENSVVUG00000017138	CLP1	71	76.708	Vulpes_vulpes
ENSLOCG00000008074	clp1	100	74.534	ENSXETG00000007088	clp1	71	75.155	Xenopus_tropicalis
ENSLOCG00000008074	clp1	100	86.025	ENSXCOG00000002287	clp1	71	86.025	Xiphophorus_couchianus
ENSLOCG00000008074	clp1	100	86.025	ENSXMAG00000009783	clp1	71	86.025	Xiphophorus_maculatus