EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000008298 (Gene tree)
Gene ID: 102689520
Gene Symbol: rbm46
Alias: fe11d09|wu:fe11d09|zgc:153695
Full Name: RNA binding motif protein 46
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 13395 bases
Position: chrLG4:21516944-21530338
Accession: 102689520
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000010078	DND1_DSRM	PF14709.7	7e-24	1	1
ENSLOCP00000010090	DND1_DSRM	PF14709.7	1.1e-23	1	1
ENSLOCP00000010090	RRM_1	PF00076.22	8.5e-36	1	3
ENSLOCP00000010090	RRM_1	PF00076.22	8.5e-36	2	3
ENSLOCP00000010090	RRM_1	PF00076.22	8.5e-36	3	3
ENSLOCP00000010078	RRM_1	PF00076.22	1.4e-35	1	3
ENSLOCP00000010078	RRM_1	PF00076.22	1.4e-35	2	3
ENSLOCP00000010078	RRM_1	PF00076.22	1.4e-35	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000010102	-	1495	-	ENSLOCP00000010090	463 (aa)	-	W5MNY1
ENSLOCT00000010090	-	3347	XM_006629482	ENSLOCP00000010078	523 (aa)	XP_006629545	W5MNW9

Gene Model

Click here to download ENSLOCG00000008298's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000008298's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000008298	rbm46	67	69.903	ENSLOCG00000012966	rbm47	50	68.608
ENSLOCG00000008298	rbm46	89	64.217	ENSLOCG00000006302	a1cf	71	64.217
ENSLOCG00000008298	rbm46	65	55.556	ENSLOCG00000016919	syncripl	75	50.423

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000008298	rbm46	96	77.679	ENSG00000151962	RBM46	85	90.265	Homo_sapiens
ENSLOCG00000008298	rbm46	95	68.000	ENSAPOG00000009209	rbm46	94	65.073	Acanthochromis_polyacanthus
ENSLOCG00000008298	rbm46	97	77.042	ENSAMEG00000013290	RBM46	97	72.973	Ailuropoda_melanoleuca
ENSLOCG00000008298	rbm46	95	64.680	ENSACIG00000014500	rbm46	87	63.974	Amphilophus_citrinellus
ENSLOCG00000008298	rbm46	95	68.363	ENSAOCG00000001892	-	99	63.447	Amphiprion_ocellaris
ENSLOCG00000008298	rbm46	95	67.873	ENSAPEG00000017762	rbm46	99	66.009	Amphiprion_percula
ENSLOCG00000008298	rbm46	97	67.699	ENSATEG00000010775	rbm46	95	63.708	Anabas_testudineus
ENSLOCG00000008298	rbm46	99	72.377	ENSAPLG00000005116	RBM46	100	72.377	Anas_platyrhynchos
ENSLOCG00000008298	rbm46	97	74.614	ENSACAG00000015599	RBM46	97	70.463	Anolis_carolinensis
ENSLOCG00000008298	rbm46	97	76.159	ENSANAG00000029193	RBM46	97	75.824	Aotus_nancymaae
ENSLOCG00000008298	rbm46	95	69.778	ENSACLG00000016153	rbm46	93	64.060	Astatotilapia_calliptera
ENSLOCG00000008298	rbm46	95	72.172	ENSAMXG00000009397	rbm46	97	72.172	Astyanax_mexicanus
ENSLOCG00000008298	rbm46	97	67.888	ENSAMXG00000020892	-	100	65.217	Astyanax_mexicanus
ENSLOCG00000008298	rbm46	97	76.600	ENSBTAG00000001696	RBM46	93	76.600	Bos_taurus
ENSLOCG00000008298	rbm46	97	75.938	ENSCJAG00000001768	RBM46	97	75.604	Callithrix_jacchus
ENSLOCG00000008298	rbm46	96	77.679	ENSCAFG00000008473	RBM46	96	73.879	Canis_familiaris
ENSLOCG00000008298	rbm46	96	77.679	ENSCAFG00020002468	RBM46	96	73.879	Canis_lupus_dingo
ENSLOCG00000008298	rbm46	99	75.325	ENSCHIG00000000502	RBM46	99	71.727	Capra_hircus
ENSLOCG00000008298	rbm46	97	76.380	ENSTSYG00000010435	RBM46	97	76.264	Carlito_syrichta
ENSLOCG00000008298	rbm46	79	74.863	ENSCAPG00000011841	-	98	74.863	Cavia_aperea
ENSLOCG00000008298	rbm46	96	76.339	ENSCAPG00000011928	-	92	76.339	Cavia_aperea
ENSLOCG00000008298	rbm46	99	74.242	ENSCPOG00000020396	-	99	70.020	Cavia_porcellus
ENSLOCG00000008298	rbm46	96	73.438	ENSCPOG00000019272	-	96	69.112	Cavia_porcellus
ENSLOCG00000008298	rbm46	96	76.339	ENSCPOG00000010284	-	96	76.000	Cavia_porcellus
ENSLOCG00000008298	rbm46	97	63.135	ENSCCAG00000001323	-	96	62.554	Cebus_capucinus
ENSLOCG00000008298	rbm46	97	76.821	ENSCCAG00000027619	-	97	76.484	Cebus_capucinus
ENSLOCG00000008298	rbm46	97	77.042	ENSCATG00000040148	RBM46	97	76.703	Cercocebus_atys
ENSLOCG00000008298	rbm46	96	76.339	ENSCLAG00000005846	-	96	76.000	Chinchilla_lanigera
ENSLOCG00000008298	rbm46	99	73.377	ENSCLAG00000011886	-	96	70.775	Chinchilla_lanigera
ENSLOCG00000008298	rbm46	97	77.042	ENSCSAG00000003263	RBM46	97	72.973	Chlorocebus_sabaeus
ENSLOCG00000008298	rbm46	97	76.600	ENSCHOG00000003429	RBM46	97	73.166	Choloepus_hoffmanni
ENSLOCG00000008298	rbm46	92	77.442	ENSCPBG00000009314	RBM46	94	77.442	Chrysemys_picta_bellii
ENSLOCG00000008298	rbm46	97	77.042	ENSCANG00000039065	RBM46	97	76.703	Colobus_angolensis_palliatus
ENSLOCG00000008298	rbm46	100	74.894	ENSCGRG00001016714	Rbm46	100	75.106	Cricetulus_griseus_chok1gshd
ENSLOCG00000008298	rbm46	100	74.894	ENSCGRG00000011738	Rbm46	100	75.106	Cricetulus_griseus_crigri
ENSLOCG00000008298	rbm46	96	60.938	ENSCSEG00000005530	rbm46	96	60.938	Cynoglossus_semilaevis
ENSLOCG00000008298	rbm46	95	67.955	ENSCVAG00000021013	rbm46	92	67.727	Cyprinodon_variegatus
ENSLOCG00000008298	rbm46	99	71.183	ENSDARG00000079452	rbm46	100	68.401	Danio_rerio
ENSLOCG00000008298	rbm46	97	76.600	ENSDNOG00000016195	RBM46	97	72.780	Dasypus_novemcinctus
ENSLOCG00000008298	rbm46	97	76.821	ENSDORG00000006405	Rbm46	97	76.484	Dipodomys_ordii
ENSLOCG00000008298	rbm46	97	76.991	ENSETEG00000014902	RBM46	97	71.622	Echinops_telfairi
ENSLOCG00000008298	rbm46	99	75.108	ENSEASG00005015821	RBM46	99	71.347	Equus_asinus_asinus
ENSLOCG00000008298	rbm46	99	75.108	ENSECAG00000007649	RBM46	95	75.108	Equus_caballus
ENSLOCG00000008298	rbm46	99	72.863	ENSEEUG00000011824	RBM46	100	69.606	Erinaceus_europaeus
ENSLOCG00000008298	rbm46	83	72.868	ENSELUG00000008166	rbm46	99	72.868	Esox_lucius
ENSLOCG00000008298	rbm46	97	76.821	ENSFCAG00000029812	RBM46	97	76.652	Felis_catus
ENSLOCG00000008298	rbm46	99	73.774	ENSFALG00000013157	RBM46	92	73.876	Ficedula_albicollis
ENSLOCG00000008298	rbm46	99	73.810	ENSFDAG00000006445	-	91	73.810	Fukomys_damarensis
ENSLOCG00000008298	rbm46	96	75.000	ENSFDAG00000019281	-	96	70.955	Fukomys_damarensis
ENSLOCG00000008298	rbm46	84	65.985	ENSFHEG00000013257	rbm46	87	65.985	Fundulus_heteroclitus
ENSLOCG00000008298	rbm46	99	67.666	ENSGALG00000009278	RBM46	99	67.666	Gallus_gallus
ENSLOCG00000008298	rbm46	74	80.464	ENSGAFG00000020245	rbm46	91	80.464	Gambusia_affinis
ENSLOCG00000008298	rbm46	97	77.042	ENSGAGG00000002019	RBM46	91	74.268	Gopherus_agassizii
ENSLOCG00000008298	rbm46	97	77.042	ENSGGOG00000001876	RBM46	97	76.703	Gorilla_gorilla
ENSLOCG00000008298	rbm46	95	65.148	ENSHBUG00000009609	rbm46	91	70.433	Haplochromis_burtoni
ENSLOCG00000008298	rbm46	92	76.000	ENSHGLG00000002463	-	95	77.184	Heterocephalus_glaber_female
ENSLOCG00000008298	rbm46	96	63.839	ENSHGLG00000002940	-	96	60.672	Heterocephalus_glaber_female
ENSLOCG00000008298	rbm46	90	67.548	ENSHGLG00000010742	-	95	59.519	Heterocephalus_glaber_female
ENSLOCG00000008298	rbm46	90	67.548	ENSHGLG00100004977	-	95	59.519	Heterocephalus_glaber_male
ENSLOCG00000008298	rbm46	96	75.000	ENSHGLG00100012752	-	96	74.667	Heterocephalus_glaber_male
ENSLOCG00000008298	rbm46	96	60.491	ENSHGLG00100018987	-	95	57.540	Heterocephalus_glaber_male
ENSLOCG00000008298	rbm46	94	53.333	ENSHCOG00000012998	rbm46	81	60.586	Hippocampus_comes
ENSLOCG00000008298	rbm46	94	72.406	ENSIPUG00000024038	rbm46	95	71.338	Ictalurus_punctatus
ENSLOCG00000008298	rbm46	100	74.894	ENSSTOG00000007918	RBM46	97	76.703	Ictidomys_tridecemlineatus
ENSLOCG00000008298	rbm46	97	77.483	ENSJJAG00000003902	Rbm46	97	77.363	Jaculus_jaculus
ENSLOCG00000008298	rbm46	95	67.342	ENSKMAG00000015127	rbm46	95	62.205	Kryptolebias_marmoratus
ENSLOCG00000008298	rbm46	99	75.162	ENSLACG00000002062	RBM46	98	71.267	Latimeria_chalumnae
ENSLOCG00000008298	rbm46	97	77.434	ENSLAFG00000015448	RBM46	97	77.434	Loxodonta_africana
ENSLOCG00000008298	rbm46	97	77.042	ENSMFAG00000043485	RBM46	97	76.703	Macaca_fascicularis
ENSLOCG00000008298	rbm46	97	77.042	ENSMMUG00000021147	RBM46	93	77.042	Macaca_mulatta
ENSLOCG00000008298	rbm46	97	77.042	ENSMNEG00000002787	RBM46	97	76.703	Macaca_nemestrina
ENSLOCG00000008298	rbm46	97	77.042	ENSMLEG00000029756	RBM46	97	76.703	Mandrillus_leucophaeus
ENSLOCG00000008298	rbm46	95	70.312	ENSMAMG00000009093	rbm46	98	64.844	Mastacembelus_armatus
ENSLOCG00000008298	rbm46	95	68.233	ENSMZEG00005027849	rbm46	94	67.896	Maylandia_zebra
ENSLOCG00000008298	rbm46	99	67.452	ENSMGAG00000001457	RBM46	99	67.452	Meleagris_gallopavo
ENSLOCG00000008298	rbm46	100	74.894	ENSMAUG00000009911	Rbm46	100	75.106	Mesocricetus_auratus
ENSLOCG00000008298	rbm46	97	76.600	ENSMICG00000042747	RBM46	97	76.264	Microcebus_murinus
ENSLOCG00000008298	rbm46	100	75.106	ENSMOCG00000001188	Rbm46	100	75.319	Microtus_ochrogaster
ENSLOCG00000008298	rbm46	95	63.717	ENSMMOG00000011214	rbm46	95	58.333	Mola_mola
ENSLOCG00000008298	rbm46	97	77.483	ENSMODG00000001302	RBM46	97	67.430	Monodelphis_domestica
ENSLOCG00000008298	rbm46	94	65.138	ENSMALG00000006185	rbm46	93	65.837	Monopterus_albus
ENSLOCG00000008298	rbm46	97	77.263	MGP_CAROLIEiJ_G0025101	Rbm46	97	76.923	Mus_caroli
ENSLOCG00000008298	rbm46	97	77.483	ENSMUSG00000033882	Rbm46	97	77.143	Mus_musculus
ENSLOCG00000008298	rbm46	99	75.758	MGP_PahariEiJ_G0026544	Rbm46	99	75.431	Mus_pahari
ENSLOCG00000008298	rbm46	97	77.263	MGP_SPRETEiJ_G0026043	Rbm46	97	76.923	Mus_spretus
ENSLOCG00000008298	rbm46	97	77.042	ENSMPUG00000005670	RBM46	93	77.042	Mustela_putorius_furo
ENSLOCG00000008298	rbm46	97	76.211	ENSMLUG00000003221	RBM46	97	72.447	Myotis_lucifugus
ENSLOCG00000008298	rbm46	97	76.821	ENSNGAG00000004231	Rbm46	97	76.484	Nannospalax_galili
ENSLOCG00000008298	rbm46	95	69.704	ENSNBRG00000000273	rbm46	84	69.144	Neolamprologus_brichardi
ENSLOCG00000008298	rbm46	97	77.042	ENSNLEG00000006184	RBM46	97	76.703	Nomascus_leucogenys
ENSLOCG00000008298	rbm46	89	76.683	ENSMEUG00000013328	RBM46	99	76.341	Notamacropus_eugenii
ENSLOCG00000008298	rbm46	58	84.328	ENSOPRG00000007136	RBM46	95	85.448	Ochotona_princeps
ENSLOCG00000008298	rbm46	99	73.593	ENSODEG00000018002	-	93	71.875	Octodon_degus
ENSLOCG00000008298	rbm46	96	76.339	ENSODEG00000000735	-	96	76.000	Octodon_degus
ENSLOCG00000008298	rbm46	95	66.741	ENSONIG00000014096	rbm46	97	67.329	Oreochromis_niloticus
ENSLOCG00000008298	rbm46	96	76.615	ENSOANG00000002141	RBM46	94	75.824	Ornithorhynchus_anatinus
ENSLOCG00000008298	rbm46	97	76.821	ENSOCUG00000017859	RBM46	97	72.780	Oryctolagus_cuniculus
ENSLOCG00000008298	rbm46	95	68.680	ENSORLG00000002429	rbm46	94	64.093	Oryzias_latipes
ENSLOCG00000008298	rbm46	95	68.444	ENSORLG00020022154	rbm46	94	63.514	Oryzias_latipes_hni
ENSLOCG00000008298	rbm46	95	68.000	ENSORLG00015020234	rbm46	92	67.834	Oryzias_latipes_hsok
ENSLOCG00000008298	rbm46	95	66.370	ENSOMEG00000022580	rbm46	99	60.536	Oryzias_melastigma
ENSLOCG00000008298	rbm46	97	77.042	ENSOGAG00000005647	RBM46	97	73.166	Otolemur_garnettii
ENSLOCG00000008298	rbm46	97	76.600	ENSOARG00000016406	RBM46	97	72.780	Ovis_aries
ENSLOCG00000008298	rbm46	97	77.042	ENSPPAG00000043236	RBM46	97	76.703	Pan_paniscus
ENSLOCG00000008298	rbm46	97	76.821	ENSPPRG00000009416	RBM46	97	76.652	Panthera_pardus
ENSLOCG00000008298	rbm46	97	76.821	ENSPTIG00000017449	RBM46	97	76.652	Panthera_tigris_altaica
ENSLOCG00000008298	rbm46	97	77.042	ENSPTRG00000016538	RBM46	97	76.703	Pan_troglodytes
ENSLOCG00000008298	rbm46	97	77.042	ENSPANG00000004186	RBM46	97	76.703	Papio_anubis
ENSLOCG00000008298	rbm46	97	77.728	ENSPKIG00000015334	rbm46	90	74.364	Paramormyrops_kingsleyae
ENSLOCG00000008298	rbm46	97	77.434	ENSPSIG00000006429	RBM46	92	77.434	Pelodiscus_sinensis
ENSLOCG00000008298	rbm46	95	84.528	ENSPMGG00000019872	rbm46	94	84.528	Periophthalmus_magnuspinnatus
ENSLOCG00000008298	rbm46	100	74.894	ENSPEMG00000013899	Rbm46	100	75.106	Peromyscus_maniculatus_bairdii
ENSLOCG00000008298	rbm46	97	77.704	ENSPCIG00000029626	RBM46	93	77.704	Phascolarctos_cinereus
ENSLOCG00000008298	rbm46	88	78.275	ENSPFOG00000001079	rbm46	77	78.025	Poecilia_formosa
ENSLOCG00000008298	rbm46	97	69.011	ENSPLAG00000004541	rbm46	95	64.193	Poecilia_latipinna
ENSLOCG00000008298	rbm46	97	69.011	ENSPMEG00000015724	rbm46	92	68.680	Poecilia_mexicana
ENSLOCG00000008298	rbm46	97	69.011	ENSPREG00000014464	rbm46	98	67.826	Poecilia_reticulata
ENSLOCG00000008298	rbm46	97	77.042	ENSPPYG00000015144	RBM46	97	72.780	Pongo_abelii
ENSLOCG00000008298	rbm46	97	73.289	ENSPCAG00000003110	RBM46	97	69.439	Procavia_capensis
ENSLOCG00000008298	rbm46	97	75.938	ENSPCOG00000024347	RBM46	97	75.604	Propithecus_coquereli
ENSLOCG00000008298	rbm46	97	77.042	ENSPVAG00000008376	RBM46	97	72.780	Pteropus_vampyrus
ENSLOCG00000008298	rbm46	97	75.325	ENSPNAG00000025312	rbm46	100	71.023	Pygocentrus_nattereri
ENSLOCG00000008298	rbm46	97	77.263	ENSRNOG00000025823	Rbm46	97	73.166	Rattus_norvegicus
ENSLOCG00000008298	rbm46	97	76.380	ENSRBIG00000032583	RBM46	97	76.044	Rhinopithecus_bieti
ENSLOCG00000008298	rbm46	97	76.600	ENSRROG00000044288	RBM46	97	76.264	Rhinopithecus_roxellana
ENSLOCG00000008298	rbm46	97	76.821	ENSSBOG00000033028	RBM46	97	76.484	Saimiri_boliviensis_boliviensis
ENSLOCG00000008298	rbm46	97	77.483	ENSSHAG00000012596	RBM46	97	73.359	Sarcophilus_harrisii
ENSLOCG00000008298	rbm46	97	77.060	ENSSFOG00015000087	rbm46	97	72.798	Scleropages_formosus
ENSLOCG00000008298	rbm46	95	64.318	ENSSMAG00000017042	rbm46	93	64.027	Scophthalmus_maximus
ENSLOCG00000008298	rbm46	95	70.721	ENSSDUG00000020645	rbm46	87	70.156	Seriola_dumerili
ENSLOCG00000008298	rbm46	97	77.263	ENSSARG00000006520	RBM46	97	72.973	Sorex_araneus
ENSLOCG00000008298	rbm46	97	75.442	ENSSPUG00000004773	-	96	74.510	Sphenodon_punctatus
ENSLOCG00000008298	rbm46	99	74.464	ENSSPUG00000012525	-	99	69.663	Sphenodon_punctatus
ENSLOCG00000008298	rbm46	97	65.556	ENSSPAG00000013697	rbm46	95	65.556	Stegastes_partitus
ENSLOCG00000008298	rbm46	97	76.600	ENSSSCG00000008994	RBM46	96	74.811	Sus_scrofa
ENSLOCG00000008298	rbm46	99	73.019	ENSTGUG00000005307	RBM46	100	73.019	Taeniopygia_guttata
ENSLOCG00000008298	rbm46	98	65.487	ENSTRUG00000004237	rbm46	90	66.591	Takifugu_rubripes
ENSLOCG00000008298	rbm46	95	65.419	ENSTNIG00000008714	rbm46	85	64.719	Tetraodon_nigroviridis
ENSLOCG00000008298	rbm46	99	73.077	ENSTBEG00000013949	RBM46	100	69.418	Tupaia_belangeri
ENSLOCG00000008298	rbm46	97	76.821	ENSTTRG00000001239	RBM46	97	72.780	Tursiops_truncatus
ENSLOCG00000008298	rbm46	97	77.042	ENSUAMG00000026593	RBM46	93	77.042	Ursus_americanus
ENSLOCG00000008298	rbm46	97	77.042	ENSUMAG00000016442	RBM46	93	77.042	Ursus_maritimus
ENSLOCG00000008298	rbm46	97	77.042	ENSVVUG00000024957	RBM46	96	76.991	Vulpes_vulpes
ENSLOCG00000008298	rbm46	99	50.215	ENSXETG00000032344	-	96	49.320	Xenopus_tropicalis
ENSLOCG00000008298	rbm46	95	69.663	ENSXETG00000022412	-	95	65.029	Xenopus_tropicalis
ENSLOCG00000008298	rbm46	78	62.637	ENSXETG00000032067	-	97	62.363	Xenopus_tropicalis
ENSLOCG00000008298	rbm46	95	67.834	ENSXMAG00000008237	rbm46	89	67.834	Xiphophorus_maculatus