EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000008338 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 4393 bases
Position: chrJH591489.1:509-4901
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000010125	zf-CCHC	PF00098.23	5.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000010154	-	852	-	ENSLOCP00000010142	284 (aa)	-	W5MP33
ENSLOCT00000010137	-	897	-	ENSLOCP00000010125	299 (aa)	-	W5MP16

Gene Model

Click here to download ENSLOCG00000008338's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000008338's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000008338	-	88	57.055	ENSLOCG00000002624	-	92	57.055
ENSLOCG00000008338	-	93	53.020	ENSLOCG00000017670	-	82	53.020
ENSLOCG00000008338	-	93	84.733	ENSLOCG00000000361	-	86	84.733
ENSLOCG00000008338	-	89	72.263	ENSLOCG00000017623	-	55	72.263
ENSLOCG00000008338	-	93	41.221	ENSLOCG00000017694	-	85	41.221
ENSLOCG00000008338	-	94	42.509	ENSLOCG00000012680	-	99	42.509
ENSLOCG00000008338	-	90	41.176	ENSLOCG00000000602	-	99	41.176
ENSLOCG00000008338	-	88	50.725	ENSLOCG00000017641	-	97	50.725
ENSLOCG00000008338	-	93	52.414	ENSLOCG00000017327	-	99	52.414
ENSLOCG00000008338	-	93	45.578	ENSLOCG00000017328	-	86	45.578
ENSLOCG00000008338	-	85	46.763	ENSLOCG00000017824	-	99	46.763
ENSLOCG00000008338	-	98	40.604	ENSLOCG00000000297	-	99	40.604
ENSLOCG00000008338	-	93	53.020	ENSLOCG00000017639	-	82	53.020
ENSLOCG00000008338	-	93	52.027	ENSLOCG00000018075	-	76	52.027
ENSLOCG00000008338	-	92	42.308	ENSLOCG00000006695	-	86	42.308
ENSLOCG00000008338	-	97	46.552	ENSLOCG00000000320	-	92	46.552
ENSLOCG00000008338	-	92	47.917	ENSLOCG00000017974	-	78	47.059
ENSLOCG00000008338	-	55	50.000	ENSLOCG00000017666	-	92	50.000
ENSLOCG00000008338	-	93	48.993	ENSLOCG00000017303	-	79	48.993
ENSLOCG00000008338	-	94	52.027	ENSLOCG00000017302	-	86	52.027
ENSLOCG00000008338	-	91	47.586	ENSLOCG00000017305	-	99	47.586
ENSLOCG00000008338	-	91	46.980	ENSLOCG00000000632	-	96	46.980
ENSLOCG00000008338	-	90	37.818	ENSLOCG00000010606	-	100	37.818
ENSLOCG00000008338	-	93	48.649	ENSLOCG00000018355	-	87	48.649
ENSLOCG00000008338	-	93	62.416	ENSLOCG00000017530	-	87	62.416
ENSLOCG00000008338	-	89	42.336	ENSLOCG00000017867	-	79	42.336
ENSLOCG00000008338	-	91	41.985	ENSLOCG00000017501	-	87	41.985
ENSLOCG00000008338	-	93	48.322	ENSLOCG00000017503	-	83	48.322

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000008338	-	89	40.000	ENSATEG00000004599	-	60	40.000	Anabas_testudineus
ENSLOCG00000008338	-	95	50.382	ENSACLG00000011316	-	73	50.382	Astatotilapia_calliptera
ENSLOCG00000008338	-	95	50.382	ENSACLG00000014014	-	71	50.382	Astatotilapia_calliptera
ENSLOCG00000008338	-	94	49.600	ENSACLG00000019919	-	99	49.600	Astatotilapia_calliptera
ENSLOCG00000008338	-	95	50.382	ENSACLG00000015881	-	74	50.382	Astatotilapia_calliptera
ENSLOCG00000008338	-	88	33.043	ENSAMXG00000035711	-	77	33.043	Astyanax_mexicanus
ENSLOCG00000008338	-	86	40.870	ENSCANG00000010812	ZCCHC3	50	40.870	Colobus_angolensis_palliatus
ENSLOCG00000008338	-	89	39.416	ENSELUG00000002602	-	71	39.416	Esox_lucius
ENSLOCG00000008338	-	93	45.139	ENSGACG00000018075	-	85	45.139	Gasterosteus_aculeatus
ENSLOCG00000008338	-	94	44.898	ENSGACG00000000773	-	86	44.898	Gasterosteus_aculeatus
ENSLOCG00000008338	-	85	34.286	ENSHBUG00000005879	-	54	34.000	Haplochromis_burtoni
ENSLOCG00000008338	-	90	39.130	ENSHBUG00000011697	-	62	39.130	Haplochromis_burtoni
ENSLOCG00000008338	-	93	49.618	ENSHBUG00000001589	-	76	49.618	Haplochromis_burtoni
ENSLOCG00000008338	-	80	36.508	ENSIPUG00000013198	-	64	36.508	Ictalurus_punctatus
ENSLOCG00000008338	-	86	41.739	ENSLAFG00000030593	ZCCHC3	51	41.739	Loxodonta_africana
ENSLOCG00000008338	-	95	50.382	ENSMZEG00005028130	-	72	50.382	Maylandia_zebra
ENSLOCG00000008338	-	80	42.308	ENSMZEG00005025873	-	72	42.308	Maylandia_zebra
ENSLOCG00000008338	-	95	50.382	ENSMZEG00005028553	-	73	50.382	Maylandia_zebra
ENSLOCG00000008338	-	85	49.600	ENSMZEG00005028547	-	92	49.600	Maylandia_zebra
ENSLOCG00000008338	-	85	33.094	ENSNBRG00000022137	-	71	33.043	Neolamprologus_brichardi
ENSLOCG00000008338	-	91	48.413	ENSNBRG00000024092	-	74	48.413	Neolamprologus_brichardi
ENSLOCG00000008338	-	86	40.870	ENSPPAG00000010453	-	52	40.870	Pan_paniscus
ENSLOCG00000008338	-	82	40.870	ENSPTIG00000009393	ZCCHC3	56	40.870	Panthera_tigris_altaica
ENSLOCG00000008338	-	55	50.704	ENSPKIG00000015924	-	62	50.704	Paramormyrops_kingsleyae
ENSLOCG00000008338	-	97	48.092	ENSPKIG00000015947	-	71	48.092	Paramormyrops_kingsleyae
ENSLOCG00000008338	-	88	36.054	ENSPNYG00000002656	-	86	34.615	Pundamilia_nyererei
ENSLOCG00000008338	-	87	47.959	ENSPNAG00000007153	-	84	47.959	Pygocentrus_nattereri
ENSLOCG00000008338	-	95	45.802	ENSPNAG00000004865	-	79	45.802	Pygocentrus_nattereri
ENSLOCG00000008338	-	60	49.296	ENSPNAG00000002955	-	75	49.296	Pygocentrus_nattereri
ENSLOCG00000008338	-	90	30.833	ENSPNAG00000010555	-	84	30.833	Pygocentrus_nattereri
ENSLOCG00000008338	-	93	44.275	ENSSFOG00015017573	-	75	44.275	Scleropages_formosus
ENSLOCG00000008338	-	93	47.328	ENSSFOG00015012405	-	79	47.328	Scleropages_formosus
ENSLOCG00000008338	-	70	42.268	ENSSFOG00015016511	-	68	46.154	Scleropages_formosus
ENSLOCG00000008338	-	93	46.512	ENSSFOG00015015819	-	69	47.321	Scleropages_formosus
ENSLOCG00000008338	-	86	40.000	ENSVPAG00000011267	-	56	40.000	Vicugna_pacos
ENSLOCG00000008338	-	93	35.821	ENSXETG00000031539	-	77	35.821	Xenopus_tropicalis
ENSLOCG00000008338	-	85	37.681	ENSXETG00000033553	-	71	37.681	Xenopus_tropicalis
ENSLOCG00000008338	-	85	36.957	ENSXETG00000034004	-	71	36.957	Xenopus_tropicalis
ENSLOCG00000008338	-	91	33.077	ENSXETG00000031282	-	81	35.652	Xenopus_tropicalis
ENSLOCG00000008338	-	95	42.424	ENSXETG00000034305	-	98	42.424	Xenopus_tropicalis
ENSLOCG00000008338	-	94	32.639	ENSXETG00000030161	-	99	32.639	Xenopus_tropicalis
ENSLOCG00000008338	-	85	35.652	ENSXETG00000032297	-	81	35.652	Xenopus_tropicalis
ENSLOCG00000008338	-	85	37.681	ENSXETG00000034120	-	71	37.681	Xenopus_tropicalis
ENSLOCG00000008338	-	88	36.296	ENSXETG00000032242	-	99	36.296	Xenopus_tropicalis
ENSLOCG00000008338	-	85	37.681	ENSXETG00000033661	-	71	37.681	Xenopus_tropicalis
ENSLOCG00000008338	-	86	34.783	ENSXETG00000033143	-	92	34.783	Xenopus_tropicalis
ENSLOCG00000008338	-	88	39.416	ENSXETG00000033641	-	89	39.416	Xenopus_tropicalis
ENSLOCG00000008338	-	91	33.333	ENSXETG00000032402	-	81	35.652	Xenopus_tropicalis
ENSLOCG00000008338	-	97	36.076	ENSXETG00000030090	-	81	36.076	Xenopus_tropicalis
ENSLOCG00000008338	-	85	36.957	ENSXETG00000030911	-	71	36.957	Xenopus_tropicalis
ENSLOCG00000008338	-	85	37.681	ENSXETG00000033566	-	71	37.681	Xenopus_tropicalis