EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000008341 (Gene tree)
Gene ID: 102686578
Gene Symbol: rbm19
Alias: nil per os|npo
Full Name: RNA binding motif protein 19
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 45276 bases
Position: chrLG20:14231298-14276573
Accession: 102686578
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000010132	RRM_1	PF00076.22	1.3e-88	1	6
ENSLOCP00000010132	RRM_1	PF00076.22	1.3e-88	2	6
ENSLOCP00000010132	RRM_1	PF00076.22	1.3e-88	3	6
ENSLOCP00000010132	RRM_1	PF00076.22	1.3e-88	4	6
ENSLOCP00000010132	RRM_1	PF00076.22	1.3e-88	5	6
ENSLOCP00000010132	RRM_1	PF00076.22	1.3e-88	6	6
ENSLOCP00000010146	RRM_1	PF00076.22	3e-77	1	5
ENSLOCP00000010146	RRM_1	PF00076.22	3e-77	2	5
ENSLOCP00000010146	RRM_1	PF00076.22	3e-77	3	5
ENSLOCP00000010146	RRM_1	PF00076.22	3e-77	4	5
ENSLOCP00000010146	RRM_1	PF00076.22	3e-77	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000010144	-	2785	XM_006640465	ENSLOCP00000010132	922 (aa)	-	W5MP23
ENSLOCT00000010158	-	2603	-	ENSLOCP00000010146	855 (aa)	-	W5MP37

Gene Model

Click here to download ENSLOCG00000008341's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000008341's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000008341	rbm19	59	38.028	ENSLOCG00000007519	pabpc1l	58	38.028

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000008341	rbm19	99	60.225	ENSG00000122965	RBM19	91	75.248	Homo_sapiens
ENSLOCG00000008341	rbm19	100	66.419	ENSAPOG00000010507	rbm19	99	66.136	Acanthochromis_polyacanthus
ENSLOCG00000008341	rbm19	99	57.477	ENSAMEG00000008544	RBM19	99	58.830	Ailuropoda_melanoleuca
ENSLOCG00000008341	rbm19	97	68.022	ENSACIG00000017780	rbm19	99	68.352	Amphilophus_citrinellus
ENSLOCG00000008341	rbm19	100	67.481	ENSAOCG00000008554	rbm19	99	68.094	Amphiprion_ocellaris
ENSLOCG00000008341	rbm19	97	67.249	ENSAPEG00000022381	rbm19	96	67.140	Amphiprion_percula
ENSLOCG00000008341	rbm19	99	66.310	ENSATEG00000007000	rbm19	99	67.026	Anabas_testudineus
ENSLOCG00000008341	rbm19	94	57.252	ENSAPLG00000015319	RBM19	99	57.533	Anas_platyrhynchos
ENSLOCG00000008341	rbm19	99	61.420	ENSACAG00000005065	RBM19	99	62.165	Anolis_carolinensis
ENSLOCG00000008341	rbm19	99	61.333	ENSANAG00000024136	RBM19	99	60.284	Aotus_nancymaae
ENSLOCG00000008341	rbm19	100	62.065	ENSACLG00000001399	rbm19	99	61.579	Astatotilapia_calliptera
ENSLOCG00000008341	rbm19	70	70.500	ENSAMXG00000017073	rbm19	99	61.290	Astyanax_mexicanus
ENSLOCG00000008341	rbm19	99	61.731	ENSBTAG00000031824	RBM19	99	62.019	Bos_taurus
ENSLOCG00000008341	rbm19	83	41.045	WBGene00004315	rbd-1	99	40.155	Caenorhabditis_elegans
ENSLOCG00000008341	rbm19	99	60.040	ENSCJAG00000009798	RBM19	99	60.834	Callithrix_jacchus
ENSLOCG00000008341	rbm19	99	59.754	ENSCAFG00000009146	RBM19	98	59.188	Canis_familiaris
ENSLOCG00000008341	rbm19	99	59.856	ENSCAFG00020017862	RBM19	98	59.289	Canis_lupus_dingo
ENSLOCG00000008341	rbm19	99	61.227	ENSCHIG00000014917	RBM19	99	61.777	Capra_hircus
ENSLOCG00000008341	rbm19	89	59.050	ENSTSYG00000007207	RBM19	96	58.923	Carlito_syrichta
ENSLOCG00000008341	rbm19	99	60.842	ENSCAPG00000006869	RBM19	98	61.457	Cavia_aperea
ENSLOCG00000008341	rbm19	99	61.237	ENSCPOG00000026629	RBM19	99	61.820	Cavia_porcellus
ENSLOCG00000008341	rbm19	99	60.821	ENSCCAG00000021665	-	99	60.566	Cebus_capucinus
ENSLOCG00000008341	rbm19	84	53.576	ENSCCAG00000026637	-	99	51.647	Cebus_capucinus
ENSLOCG00000008341	rbm19	99	60.707	ENSCATG00000035841	RBM19	99	60.938	Cercocebus_atys
ENSLOCG00000008341	rbm19	99	61.066	ENSCLAG00000009965	RBM19	99	61.088	Chinchilla_lanigera
ENSLOCG00000008341	rbm19	94	69.380	ENSCSAG00000002352	RBM19	97	56.475	Chlorocebus_sabaeus
ENSLOCG00000008341	rbm19	99	62.012	ENSCPBG00000011990	RBM19	99	62.359	Chrysemys_picta_bellii
ENSLOCG00000008341	rbm19	78	51.923	ENSCING00000023076	-	96	51.033	Ciona_intestinalis
ENSLOCG00000008341	rbm19	99	60.327	ENSCANG00000035927	RBM19	99	60.020	Colobus_angolensis_palliatus
ENSLOCG00000008341	rbm19	99	61.658	ENSCGRG00001000323	Rbm19	99	60.467	Cricetulus_griseus_chok1gshd
ENSLOCG00000008341	rbm19	99	61.658	ENSCGRG00000010371	Rbm19	99	60.467	Cricetulus_griseus_crigri
ENSLOCG00000008341	rbm19	100	63.589	ENSCSEG00000017436	rbm19	100	64.017	Cynoglossus_semilaevis
ENSLOCG00000008341	rbm19	100	65.919	ENSCVAG00000000300	rbm19	100	66.346	Cyprinodon_variegatus
ENSLOCG00000008341	rbm19	99	65.753	ENSDARG00000042590	rbm19	99	65.825	Danio_rerio
ENSLOCG00000008341	rbm19	99	58.811	ENSDNOG00000024534	RBM19	96	58.182	Dasypus_novemcinctus
ENSLOCG00000008341	rbm19	97	61.620	ENSDORG00000008549	Rbm19	100	61.301	Dipodomys_ordii
ENSLOCG00000008341	rbm19	74	41.369	FBgn0036018	CG3335	96	38.050	Drosophila_melanogaster
ENSLOCG00000008341	rbm19	69	75.362	ENSETEG00000016887	-	56	75.362	Echinops_telfairi
ENSLOCG00000008341	rbm19	86	43.802	ENSEBUG00000008521	-	99	43.206	Eptatretus_burgeri
ENSLOCG00000008341	rbm19	99	59.877	ENSEASG00005009452	RBM19	99	60.718	Equus_asinus_asinus
ENSLOCG00000008341	rbm19	99	60.389	ENSECAG00000023716	RBM19	99	60.696	Equus_caballus
ENSLOCG00000008341	rbm19	100	69.050	ENSELUG00000012561	rbm19	99	68.550	Esox_lucius
ENSLOCG00000008341	rbm19	99	58.702	ENSFCAG00000002962	RBM19	98	58.776	Felis_catus
ENSLOCG00000008341	rbm19	98	60.947	ENSFALG00000007768	RBM19	99	60.496	Ficedula_albicollis
ENSLOCG00000008341	rbm19	99	60.104	ENSFDAG00000004629	RBM19	99	60.707	Fukomys_damarensis
ENSLOCG00000008341	rbm19	100	66.667	ENSFHEG00000012578	rbm19	99	66.523	Fundulus_heteroclitus
ENSLOCG00000008341	rbm19	97	63.696	ENSGMOG00000013120	rbm19	100	62.704	Gadus_morhua
ENSLOCG00000008341	rbm19	98	59.811	ENSGALG00000008289	RBM19	99	60.207	Gallus_gallus
ENSLOCG00000008341	rbm19	100	65.773	ENSGAFG00000012337	rbm19	99	65.843	Gambusia_affinis
ENSLOCG00000008341	rbm19	99	65.139	ENSGACG00000009462	rbm19	100	65.027	Gasterosteus_aculeatus
ENSLOCG00000008341	rbm19	67	69.336	ENSGAGG00000019457	RBM19	99	69.863	Gopherus_agassizii
ENSLOCG00000008341	rbm19	99	60.838	ENSGGOG00000007371	RBM19	99	60.631	Gorilla_gorilla
ENSLOCG00000008341	rbm19	100	65.638	ENSHBUG00000009047	rbm19	99	64.845	Haplochromis_burtoni
ENSLOCG00000008341	rbm19	99	60.228	ENSHGLG00000010899	RBM19	99	60.082	Heterocephalus_glaber_female
ENSLOCG00000008341	rbm19	99	59.507	ENSHGLG00100017936	RBM19	99	59.674	Heterocephalus_glaber_male
ENSLOCG00000008341	rbm19	99	63.627	ENSHCOG00000016446	rbm19	99	63.880	Hippocampus_comes
ENSLOCG00000008341	rbm19	99	65.792	ENSIPUG00000023849	rbm19	99	66.068	Ictalurus_punctatus
ENSLOCG00000008341	rbm19	99	65.714	ENSKMAG00000014807	rbm19	96	69.027	Kryptolebias_marmoratus
ENSLOCG00000008341	rbm19	99	65.385	ENSLBEG00000012897	rbm19	99	64.925	Labrus_bergylta
ENSLOCG00000008341	rbm19	81	57.342	ENSLACG00000012030	RBM19	100	61.599	Latimeria_chalumnae
ENSLOCG00000008341	rbm19	89	59.054	ENSLAFG00000004187	RBM19	100	57.272	Loxodonta_africana
ENSLOCG00000008341	rbm19	99	60.718	ENSMFAG00000046091	RBM19	99	58.489	Macaca_fascicularis
ENSLOCG00000008341	rbm19	99	60.821	ENSMMUG00000010496	RBM19	99	61.254	Macaca_mulatta
ENSLOCG00000008341	rbm19	99	55.888	ENSMNEG00000028452	RBM19	99	58.817	Macaca_nemestrina
ENSLOCG00000008341	rbm19	99	59.529	ENSMLEG00000034550	RBM19	99	59.959	Mandrillus_leucophaeus
ENSLOCG00000008341	rbm19	99	67.267	ENSMAMG00000014397	rbm19	100	65.792	Mastacembelus_armatus
ENSLOCG00000008341	rbm19	99	66.702	ENSMZEG00005016607	rbm19	99	66.206	Maylandia_zebra
ENSLOCG00000008341	rbm19	97	54.846	ENSMGAG00000010087	RBM19	99	54.004	Meleagris_gallopavo
ENSLOCG00000008341	rbm19	99	61.273	ENSMAUG00000019290	Rbm19	99	60.594	Mesocricetus_auratus
ENSLOCG00000008341	rbm19	99	60.329	ENSMICG00000014423	RBM19	99	59.959	Microcebus_murinus
ENSLOCG00000008341	rbm19	99	64.293	ENSMMOG00000017839	rbm19	99	63.014	Mola_mola
ENSLOCG00000008341	rbm19	99	60.603	ENSMODG00000003597	RBM19	99	60.811	Monodelphis_domestica
ENSLOCG00000008341	rbm19	99	65.739	ENSMALG00000012647	rbm19	99	65.953	Monopterus_albus
ENSLOCG00000008341	rbm19	100	62.668	MGP_CAROLIEiJ_G0027656	Rbm19	99	62.591	Mus_caroli
ENSLOCG00000008341	rbm19	100	62.565	ENSMUSG00000029594	Rbm19	99	62.241	Mus_musculus
ENSLOCG00000008341	rbm19	100	62.293	MGP_PahariEiJ_G0024238	Rbm19	99	62.137	Mus_pahari
ENSLOCG00000008341	rbm19	100	62.176	MGP_SPRETEiJ_G0028656	Rbm19	99	62.073	Mus_spretus
ENSLOCG00000008341	rbm19	94	59.647	ENSMPUG00000002694	RBM19	98	59.939	Mustela_putorius_furo
ENSLOCG00000008341	rbm19	99	60.341	ENSMLUG00000015075	RBM19	99	60.628	Myotis_lucifugus
ENSLOCG00000008341	rbm19	100	61.157	ENSNGAG00000009076	Rbm19	99	61.722	Nannospalax_galili
ENSLOCG00000008341	rbm19	100	65.778	ENSNBRG00000005913	rbm19	99	65.919	Neolamprologus_brichardi
ENSLOCG00000008341	rbm19	99	60.225	ENSNLEG00000000190	RBM19	99	60.122	Nomascus_leucogenys
ENSLOCG00000008341	rbm19	100	52.929	ENSMEUG00000004045	RBM19	99	52.323	Notamacropus_eugenii
ENSLOCG00000008341	rbm19	99	60.973	ENSOPRG00000012064	RBM19	99	61.737	Ochotona_princeps
ENSLOCG00000008341	rbm19	99	60.127	ENSODEG00000012977	RBM19	99	60.699	Octodon_degus
ENSLOCG00000008341	rbm19	99	65.792	ENSONIG00000013576	rbm19	99	69.510	Oreochromis_niloticus
ENSLOCG00000008341	rbm19	99	59.504	ENSOCUG00000009398	RBM19	99	60.188	Oryctolagus_cuniculus
ENSLOCG00000008341	rbm19	99	64.643	ENSORLG00000008077	rbm19	99	65.180	Oryzias_latipes
ENSLOCG00000008341	rbm19	98	64.332	ENSORLG00020013187	rbm19	99	65.217	Oryzias_latipes_hni
ENSLOCG00000008341	rbm19	99	64.574	ENSORLG00015001774	rbm19	99	64.787	Oryzias_latipes_hsok
ENSLOCG00000008341	rbm19	100	64.700	ENSOMEG00000003334	rbm19	100	65.153	Oryzias_melastigma
ENSLOCG00000008341	rbm19	93	59.795	ENSOGAG00000000602	RBM19	100	59.841	Otolemur_garnettii
ENSLOCG00000008341	rbm19	99	61.835	ENSOARG00000006827	RBM19	99	61.944	Ovis_aries
ENSLOCG00000008341	rbm19	99	60.368	ENSPPAG00000043712	RBM19	99	60.553	Pan_paniscus
ENSLOCG00000008341	rbm19	99	59.091	ENSPPRG00000023027	RBM19	98	59.003	Panthera_pardus
ENSLOCG00000008341	rbm19	99	56.087	ENSPTIG00000011096	RBM19	99	56.788	Panthera_tigris_altaica
ENSLOCG00000008341	rbm19	99	60.368	ENSPTRG00000005494	RBM19	99	60.553	Pan_troglodytes
ENSLOCG00000008341	rbm19	99	60.513	ENSPANG00000004795	RBM19	98	57.884	Papio_anubis
ENSLOCG00000008341	rbm19	99	68.777	ENSPKIG00000017095	rbm19	99	67.987	Paramormyrops_kingsleyae
ENSLOCG00000008341	rbm19	89	61.615	ENSPSIG00000008191	RBM19	99	60.205	Pelodiscus_sinensis
ENSLOCG00000008341	rbm19	86	67.690	ENSPMGG00000019087	rbm19	98	67.851	Periophthalmus_magnuspinnatus
ENSLOCG00000008341	rbm19	99	60.874	ENSPEMG00000018058	Rbm19	99	59.755	Peromyscus_maniculatus_bairdii
ENSLOCG00000008341	rbm19	100	60.878	ENSPCIG00000028861	RBM19	99	60.802	Phascolarctos_cinereus
ENSLOCG00000008341	rbm19	99	66.273	ENSPFOG00000015300	rbm19	99	66.953	Poecilia_formosa
ENSLOCG00000008341	rbm19	100	66.165	ENSPLAG00000000059	rbm19	99	66.988	Poecilia_latipinna
ENSLOCG00000008341	rbm19	99	66.524	ENSPMEG00000018585	rbm19	99	66.774	Poecilia_mexicana
ENSLOCG00000008341	rbm19	99	66.273	ENSPREG00000000978	rbm19	99	66.134	Poecilia_reticulata
ENSLOCG00000008341	rbm19	99	59.404	ENSPPYG00000004993	RBM19	99	58.248	Pongo_abelii
ENSLOCG00000008341	rbm19	59	69.507	ENSPCAG00000005063	-	58	69.369	Procavia_capensis
ENSLOCG00000008341	rbm19	99	60.637	ENSPCOG00000016190	RBM19	99	60.905	Propithecus_coquereli
ENSLOCG00000008341	rbm19	99	59.426	ENSPVAG00000011618	RBM19	99	59.553	Pteropus_vampyrus
ENSLOCG00000008341	rbm19	99	65.539	ENSPNYG00000017434	rbm19	99	65.048	Pundamilia_nyererei
ENSLOCG00000008341	rbm19	99	66.349	ENSPNAG00000012069	rbm19	99	66.138	Pygocentrus_nattereri
ENSLOCG00000008341	rbm19	100	61.626	ENSRNOG00000001397	Rbm19	99	61.713	Rattus_norvegicus
ENSLOCG00000008341	rbm19	99	60.883	ENSRBIG00000041419	RBM19	99	59.815	Rhinopithecus_bieti
ENSLOCG00000008341	rbm19	99	60.678	ENSRROG00000031938	RBM19	99	60.946	Rhinopithecus_roxellana
ENSLOCG00000008341	rbm19	69	38.150	YPR112C	-	77	36.450	Saccharomyces_cerevisiae
ENSLOCG00000008341	rbm19	88	53.107	ENSSBOG00000022679	-	99	51.794	Saimiri_boliviensis_boliviensis
ENSLOCG00000008341	rbm19	99	59.385	ENSSBOG00000021434	-	99	59.305	Saimiri_boliviensis_boliviensis
ENSLOCG00000008341	rbm19	100	62.905	ENSSHAG00000012256	RBM19	99	62.591	Sarcophilus_harrisii
ENSLOCG00000008341	rbm19	100	68.058	ENSSFOG00015005124	rbm19	99	68.580	Scleropages_formosus
ENSLOCG00000008341	rbm19	99	65.892	ENSSMAG00000011828	rbm19	99	66.139	Scophthalmus_maximus
ENSLOCG00000008341	rbm19	99	66.844	ENSSDUG00000013544	rbm19	99	66.844	Seriola_dumerili
ENSLOCG00000008341	rbm19	89	70.152	ENSSLDG00000025413	rbm19	95	70.534	Seriola_lalandi_dorsalis
ENSLOCG00000008341	rbm19	67	68.041	ENSSPUG00000011064	RBM19	98	69.841	Sphenodon_punctatus
ENSLOCG00000008341	rbm19	97	66.300	ENSSPAG00000018685	rbm19	98	66.007	Stegastes_partitus
ENSLOCG00000008341	rbm19	99	62.474	ENSSSCG00000009868	RBM19	99	62.890	Sus_scrofa
ENSLOCG00000008341	rbm19	100	59.609	ENSTGUG00000009017	RBM19	99	59.771	Taeniopygia_guttata
ENSLOCG00000008341	rbm19	99	64.700	ENSTRUG00000016032	rbm19	99	64.588	Takifugu_rubripes
ENSLOCG00000008341	rbm19	63	73.414	ENSTNIG00000015903	rbm19	99	73.414	Tetraodon_nigroviridis
ENSLOCG00000008341	rbm19	75	68.831	ENSTBEG00000000703	RBM19	79	68.831	Tupaia_belangeri
ENSLOCG00000008341	rbm19	83	65.000	ENSTTRG00000003987	RBM19	83	65.000	Tursiops_truncatus
ENSLOCG00000008341	rbm19	99	58.273	ENSUAMG00000002076	RBM19	98	59.378	Ursus_americanus
ENSLOCG00000008341	rbm19	99	58.698	ENSUMAG00000010816	RBM19	99	59.795	Ursus_maritimus
ENSLOCG00000008341	rbm19	99	59.631	ENSVVUG00000007886	RBM19	98	60.391	Vulpes_vulpes
ENSLOCG00000008341	rbm19	100	58.516	ENSXETG00000017668	rbm19	100	59.559	Xenopus_tropicalis
ENSLOCG00000008341	rbm19	100	64.817	ENSXCOG00000016995	rbm19	99	65.089	Xiphophorus_couchianus
ENSLOCG00000008341	rbm19	100	65.300	ENSXMAG00000007641	rbm19	99	65.528	Xiphophorus_maculatus