EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000008485 (Gene tree)
Gene ID: 102686496
Gene Symbol: ddx54
Alias: chunp6913|mgc2835
Full Name: DEAD-box helicase 54
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 12948 bases
Position: chrLG20:14418833-14431780
Accession: 102686496
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000010328	DBP10CT	PF08147.12	3.3e-20	1	1
ENSLOCP00000010328	ResIII	PF04851.15	9.8e-07	1	1
ENSLOCP00000010328	DEAD	PF00270.29	2e-51	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000010341	-	2781	XM_006640296	ENSLOCP00000010328	851 (aa)	XP_015221580	W5MPL9

Gene Model

Click here to download ENSLOCG00000008485's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000008485's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000008485	ddx54	52	34.812	ENSLOCG00000003108	ddx18	65	34.812

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000008485	ddx54	98	63.298	ENSG00000123064	DDX54	100	89.423	Homo_sapiens
ENSLOCG00000008485	ddx54	98	74.618	ENSAPOG00000008602	ddx54	100	74.625	Acanthochromis_polyacanthus
ENSLOCG00000008485	ddx54	98	63.850	ENSAMEG00000008775	DDX54	95	63.518	Ailuropoda_melanoleuca
ENSLOCG00000008485	ddx54	100	73.410	ENSACIG00000019104	ddx54	100	73.441	Amphilophus_citrinellus
ENSLOCG00000008485	ddx54	98	74.235	ENSAOCG00000008449	ddx54	100	74.164	Amphiprion_ocellaris
ENSLOCG00000008485	ddx54	98	74.235	ENSAPEG00000014287	ddx54	100	74.164	Amphiprion_percula
ENSLOCG00000008485	ddx54	100	73.818	ENSATEG00000018529	ddx54	100	74.625	Anabas_testudineus
ENSLOCG00000008485	ddx54	94	66.831	ENSAPLG00000013191	DDX54	99	66.749	Anas_platyrhynchos
ENSLOCG00000008485	ddx54	94	67.897	ENSACAG00000004703	DDX54	96	67.734	Anolis_carolinensis
ENSLOCG00000008485	ddx54	99	54.680	ENSANAG00000032761	-	96	54.682	Aotus_nancymaae
ENSLOCG00000008485	ddx54	90	57.766	ENSANAG00000032241	-	95	57.254	Aotus_nancymaae
ENSLOCG00000008485	ddx54	100	74.912	ENSACLG00000013176	ddx54	100	74.592	Astatotilapia_calliptera
ENSLOCG00000008485	ddx54	100	74.651	ENSAMXG00000009189	ddx54	100	74.797	Astyanax_mexicanus
ENSLOCG00000008485	ddx54	98	63.626	ENSBTAG00000011930	DDX54	91	63.743	Bos_taurus
ENSLOCG00000008485	ddx54	88	46.433	WBGene00022378	Y94H6A.5	96	45.320	Caenorhabditis_elegans
ENSLOCG00000008485	ddx54	88	66.667	ENSCJAG00000010039	DDX54	84	65.404	Callithrix_jacchus
ENSLOCG00000008485	ddx54	66	56.098	ENSCAFG00000009029	DDX54	99	56.944	Canis_familiaris
ENSLOCG00000008485	ddx54	98	64.094	ENSCAFG00020017643	DDX54	96	64.720	Canis_lupus_dingo
ENSLOCG00000008485	ddx54	98	62.954	ENSCHIG00000026798	DDX54	96	62.954	Capra_hircus
ENSLOCG00000008485	ddx54	95	60.753	ENSTSYG00000007898	DDX54	94	61.286	Carlito_syrichta
ENSLOCG00000008485	ddx54	95	64.093	ENSCAPG00000001482	DDX54	99	60.922	Cavia_aperea
ENSLOCG00000008485	ddx54	98	63.583	ENSCPOG00000020649	DDX54	96	63.860	Cavia_porcellus
ENSLOCG00000008485	ddx54	98	64.000	ENSCCAG00000022625	DDX54	96	64.169	Cebus_capucinus
ENSLOCG00000008485	ddx54	98	63.158	ENSCATG00000041943	DDX54	96	63.509	Cercocebus_atys
ENSLOCG00000008485	ddx54	100	63.213	ENSCLAG00000010748	DDX54	98	63.605	Chinchilla_lanigera
ENSLOCG00000008485	ddx54	94	63.265	ENSCSAG00000002432	DDX54	90	63.385	Chlorocebus_sabaeus
ENSLOCG00000008485	ddx54	76	66.102	ENSCPBG00000017982	DDX54	85	66.718	Chrysemys_picta_bellii
ENSLOCG00000008485	ddx54	88	56.266	ENSCING00000004789	-	94	56.291	Ciona_intestinalis
ENSLOCG00000008485	ddx54	91	54.698	ENSCSAVG00000008916	-	98	71.386	Ciona_savignyi
ENSLOCG00000008485	ddx54	89	87.607	ENSCANG00000020637	DDX54	99	87.607	Colobus_angolensis_palliatus
ENSLOCG00000008485	ddx54	100	63.158	ENSCGRG00001014803	Ddx54	96	63.615	Cricetulus_griseus_chok1gshd
ENSLOCG00000008485	ddx54	100	63.230	ENSCGRG00000002827	Ddx54	96	63.690	Cricetulus_griseus_crigri
ENSLOCG00000008485	ddx54	98	71.074	ENSCSEG00000016462	ddx54	100	72.254	Cynoglossus_semilaevis
ENSLOCG00000008485	ddx54	100	72.422	ENSCVAG00000022404	ddx54	100	72.549	Cyprinodon_variegatus
ENSLOCG00000008485	ddx54	100	71.789	ENSDARG00000105286	ddx54	100	73.064	Danio_rerio
ENSLOCG00000008485	ddx54	98	64.151	ENSDNOG00000032913	DDX54	96	64.395	Dasypus_novemcinctus
ENSLOCG00000008485	ddx54	81	58.714	ENSDORG00000003399	Ddx54	95	58.898	Dipodomys_ordii
ENSLOCG00000008485	ddx54	86	46.214	FBgn0052344	CG32344	88	47.446	Drosophila_melanogaster
ENSLOCG00000008485	ddx54	50	88.194	ENSETEG00000008430	-	52	88.194	Echinops_telfairi
ENSLOCG00000008485	ddx54	82	58.815	ENSEBUG00000008886	ddx54	97	59.624	Eptatretus_burgeri
ENSLOCG00000008485	ddx54	98	55.236	ENSEASG00005009501	DDX54	100	56.413	Equus_asinus_asinus
ENSLOCG00000008485	ddx54	98	62.544	ENSECAG00000012890	DDX54	96	62.894	Equus_caballus
ENSLOCG00000008485	ddx54	62	87.342	ENSEEUG00000008296	-	62	87.342	Erinaceus_europaeus
ENSLOCG00000008485	ddx54	100	70.762	ENSELUG00000013533	ddx54	100	72.191	Esox_lucius
ENSLOCG00000008485	ddx54	98	62.646	ENSFCAG00000027806	DDX54	96	63.072	Felis_catus
ENSLOCG00000008485	ddx54	92	68.640	ENSFALG00000007737	DDX54	100	69.075	Ficedula_albicollis
ENSLOCG00000008485	ddx54	87	75.870	ENSFDAG00000019953	DDX54	94	75.870	Fukomys_damarensis
ENSLOCG00000008485	ddx54	100	72.370	ENSFHEG00000018425	ddx54	100	72.370	Fundulus_heteroclitus
ENSLOCG00000008485	ddx54	96	69.415	ENSGMOG00000011746	ddx54	100	69.679	Gadus_morhua
ENSLOCG00000008485	ddx54	94	68.109	ENSGALG00000007490	DDX54	97	68.109	Gallus_gallus
ENSLOCG00000008485	ddx54	100	71.612	ENSGAFG00000010336	ddx54	100	71.562	Gambusia_affinis
ENSLOCG00000008485	ddx54	100	67.918	ENSGACG00000016793	ddx54	100	68.630	Gasterosteus_aculeatus
ENSLOCG00000008485	ddx54	95	69.506	ENSGAGG00000022803	DDX54	100	69.549	Gopherus_agassizii
ENSLOCG00000008485	ddx54	98	63.066	ENSGGOG00000010414	DDX54	96	63.403	Gorilla_gorilla
ENSLOCG00000008485	ddx54	98	63.991	ENSHGLG00000014411	DDX54	96	63.170	Heterocephalus_glaber_female
ENSLOCG00000008485	ddx54	98	63.797	ENSHGLG00100018511	DDX54	96	62.980	Heterocephalus_glaber_male
ENSLOCG00000008485	ddx54	100	72.854	ENSHCOG00000019287	ddx54	100	72.622	Hippocampus_comes
ENSLOCG00000008485	ddx54	100	70.983	ENSIPUG00000015556	Ddx54	100	72.203	Ictalurus_punctatus
ENSLOCG00000008485	ddx54	89	62.179	ENSSTOG00000004068	DDX54	100	62.308	Ictidomys_tridecemlineatus
ENSLOCG00000008485	ddx54	98	64.455	ENSJJAG00000015712	Ddx54	96	64.455	Jaculus_jaculus
ENSLOCG00000008485	ddx54	100	72.079	ENSKMAG00000017520	ddx54	100	72.378	Kryptolebias_marmoratus
ENSLOCG00000008485	ddx54	100	69.920	ENSLBEG00000019480	ddx54	100	69.783	Labrus_bergylta
ENSLOCG00000008485	ddx54	96	70.581	ENSLACG00000008944	DDX54	96	70.595	Latimeria_chalumnae
ENSLOCG00000008485	ddx54	90	54.579	ENSLAFG00000027782	DDX54	100	54.579	Loxodonta_africana
ENSLOCG00000008485	ddx54	98	63.084	ENSMFAG00000043636	DDX54	96	63.435	Macaca_fascicularis
ENSLOCG00000008485	ddx54	98	63.318	ENSMMUG00000021795	DDX54	96	63.318	Macaca_mulatta
ENSLOCG00000008485	ddx54	98	57.876	ENSMNEG00000043605	DDX54	96	57.876	Macaca_nemestrina
ENSLOCG00000008485	ddx54	98	60.351	ENSMLEG00000038981	DDX54	96	60.351	Mandrillus_leucophaeus
ENSLOCG00000008485	ddx54	100	73.502	ENSMAMG00000012784	ddx54	99	74.035	Mastacembelus_armatus
ENSLOCG00000008485	ddx54	100	73.857	ENSMZEG00005018773	ddx54	100	73.536	Maylandia_zebra
ENSLOCG00000008485	ddx54	94	66.545	ENSMGAG00000009183	DDX54	100	66.545	Meleagris_gallopavo
ENSLOCG00000008485	ddx54	98	63.561	ENSMAUG00000011051	Ddx54	96	63.850	Mesocricetus_auratus
ENSLOCG00000008485	ddx54	100	62.788	ENSMICG00000012217	DDX54	96	63.423	Microcebus_murinus
ENSLOCG00000008485	ddx54	100	63.668	ENSMOCG00000010835	Ddx54	97	63.743	Microtus_ochrogaster
ENSLOCG00000008485	ddx54	98	71.871	ENSMMOG00000009634	ddx54	100	71.579	Mola_mola
ENSLOCG00000008485	ddx54	97	64.929	ENSMODG00000003413	DDX54	99	65.591	Monodelphis_domestica
ENSLOCG00000008485	ddx54	100	74.446	ENSMALG00000022098	ddx54	100	74.272	Monopterus_albus
ENSLOCG00000008485	ddx54	98	64.941	MGP_CAROLIEiJ_G0027665	Ddx54	96	64.988	Mus_caroli
ENSLOCG00000008485	ddx54	98	65.012	ENSMUSG00000029599	Ddx54	96	65.176	Mus_musculus
ENSLOCG00000008485	ddx54	98	64.193	MGP_PahariEiJ_G0024247	Ddx54	96	64.009	Mus_pahari
ENSLOCG00000008485	ddx54	98	64.858	MGP_SPRETEiJ_G0028665	Ddx54	96	64.630	Mus_spretus
ENSLOCG00000008485	ddx54	98	63.711	ENSMPUG00000002574	DDX54	96	64.186	Mustela_putorius_furo
ENSLOCG00000008485	ddx54	98	63.679	ENSNGAG00000021313	Ddx54	96	63.572	Nannospalax_galili
ENSLOCG00000008485	ddx54	70	87.561	ENSNBRG00000005588	ddx54	76	87.561	Neolamprologus_brichardi
ENSLOCG00000008485	ddx54	98	63.700	ENSNLEG00000000162	DDX54	96	64.311	Nomascus_leucogenys
ENSLOCG00000008485	ddx54	78	69.185	ENSMEUG00000015392	DDX54	97	69.083	Notamacropus_eugenii
ENSLOCG00000008485	ddx54	87	56.915	ENSOPRG00000012000	DDX54	86	56.897	Ochotona_princeps
ENSLOCG00000008485	ddx54	98	62.220	ENSODEG00000014863	DDX54	96	62.220	Octodon_degus
ENSLOCG00000008485	ddx54	98	62.137	ENSOCUG00000008932	DDX54	96	62.297	Oryctolagus_cuniculus
ENSLOCG00000008485	ddx54	100	70.396	ENSORLG00000007385	ddx54	98	70.720	Oryzias_latipes
ENSLOCG00000008485	ddx54	100	70.629	ENSORLG00020000858	ddx54	98	70.956	Oryzias_latipes_hni
ENSLOCG00000008485	ddx54	100	70.396	ENSORLG00015006956	ddx54	98	70.720	Oryzias_latipes_hsok
ENSLOCG00000008485	ddx54	98	72.057	ENSOMEG00000003663	ddx54	100	72.093	Oryzias_melastigma
ENSLOCG00000008485	ddx54	98	64.052	ENSOGAG00000004210	DDX54	96	64.437	Otolemur_garnettii
ENSLOCG00000008485	ddx54	98	63.392	ENSOARG00000008363	DDX54	96	63.435	Ovis_aries
ENSLOCG00000008485	ddx54	98	63.194	ENSPPAG00000042178	DDX54	96	63.415	Pan_paniscus
ENSLOCG00000008485	ddx54	98	61.007	ENSPPRG00000005223	DDX54	96	61.710	Panthera_pardus
ENSLOCG00000008485	ddx54	62	85.340	ENSPTIG00000019728	DDX54	81	85.340	Panthera_tigris_altaica
ENSLOCG00000008485	ddx54	98	63.182	ENSPTRG00000005483	DDX54	96	63.520	Pan_troglodytes
ENSLOCG00000008485	ddx54	98	63.201	ENSPANG00000008883	DDX54	96	63.201	Papio_anubis
ENSLOCG00000008485	ddx54	100	75.145	ENSPKIG00000018272	ddx54	98	75.406	Paramormyrops_kingsleyae
ENSLOCG00000008485	ddx54	55	78.710	ENSPSIG00000005055	DDX54	96	78.587	Pelodiscus_sinensis
ENSLOCG00000008485	ddx54	95	70.792	ENSPMGG00000010988	ddx54	99	70.792	Periophthalmus_magnuspinnatus
ENSLOCG00000008485	ddx54	100	63.835	ENSPEMG00000016701	Ddx54	96	64.395	Peromyscus_maniculatus_bairdii
ENSLOCG00000008485	ddx54	100	73.458	ENSPFOG00000019822	ddx54	100	73.032	Poecilia_formosa
ENSLOCG00000008485	ddx54	100	73.403	ENSPLAG00000004530	ddx54	100	73.148	Poecilia_latipinna
ENSLOCG00000008485	ddx54	100	73.287	ENSPMEG00000010803	ddx54	100	73.032	Poecilia_mexicana
ENSLOCG00000008485	ddx54	100	73.458	ENSPREG00000014372	ddx54	100	73.574	Poecilia_reticulata
ENSLOCG00000008485	ddx54	98	63.152	ENSPPYG00000004984	DDX54	96	63.605	Pongo_abelii
ENSLOCG00000008485	ddx54	98	60.070	ENSPCAG00000008462	DDX54	96	60.468	Procavia_capensis
ENSLOCG00000008485	ddx54	98	63.455	ENSPCOG00000006050	DDX54	96	63.109	Propithecus_coquereli
ENSLOCG00000008485	ddx54	91	81.439	ENSPVAG00000017347	DDX54	89	81.439	Pteropus_vampyrus
ENSLOCG00000008485	ddx54	100	71.711	ENSPNAG00000014459	ddx54	97	77.618	Pygocentrus_nattereri
ENSLOCG00000008485	ddx54	98	64.421	ENSRNOG00000001377	Ddx54	92	64.118	Rattus_norvegicus
ENSLOCG00000008485	ddx54	100	62.386	ENSRBIG00000032535	DDX54	96	63.520	Rhinopithecus_bieti
ENSLOCG00000008485	ddx54	100	59.158	ENSRROG00000029557	DDX54	96	59.743	Rhinopithecus_roxellana
ENSLOCG00000008485	ddx54	89	36.706	YDL031W	-	84	35.047	Saccharomyces_cerevisiae
ENSLOCG00000008485	ddx54	98	64.177	ENSSBOG00000028194	DDX54	96	64.610	Saimiri_boliviensis_boliviensis
ENSLOCG00000008485	ddx54	95	63.537	ENSSHAG00000015646	DDX54	99	64.555	Sarcophilus_harrisii
ENSLOCG00000008485	ddx54	100	75.902	ENSSFOG00015014981	ddx54	100	75.902	Scleropages_formosus
ENSLOCG00000008485	ddx54	98	70.513	ENSSMAG00000003210	ddx54	100	71.281	Scophthalmus_maximus
ENSLOCG00000008485	ddx54	98	71.977	ENSSDUG00000004474	ddx54	100	72.260	Seriola_dumerili
ENSLOCG00000008485	ddx54	98	72.093	ENSSLDG00000010380	ddx54	100	71.918	Seriola_lalandi_dorsalis
ENSLOCG00000008485	ddx54	97	69.028	ENSSPUG00000014141	DDX54	97	69.028	Sphenodon_punctatus
ENSLOCG00000008485	ddx54	92	72.888	ENSSPAG00000022918	ddx54	97	73.153	Stegastes_partitus
ENSLOCG00000008485	ddx54	98	63.318	ENSSSCG00000009876	DDX54	96	63.668	Sus_scrofa
ENSLOCG00000008485	ddx54	93	67.910	ENSTGUG00000009126	DDX54	100	67.910	Taeniopygia_guttata
ENSLOCG00000008485	ddx54	100	71.379	ENSTRUG00000014939	ddx54	100	72.216	Takifugu_rubripes
ENSLOCG00000008485	ddx54	100	72.254	ENSTNIG00000009037	ddx54	100	72.139	Tetraodon_nigroviridis
ENSLOCG00000008485	ddx54	73	80.446	ENSTBEG00000003783	DDX54	86	80.446	Tupaia_belangeri
ENSLOCG00000008485	ddx54	98	60.677	ENSTTRG00000016678	DDX54	96	60.930	Tursiops_truncatus
ENSLOCG00000008485	ddx54	98	63.743	ENSUAMG00000028387	DDX54	99	64.794	Ursus_americanus
ENSLOCG00000008485	ddx54	86	80.798	ENSUMAG00000010245	DDX54	94	82.011	Ursus_maritimus
ENSLOCG00000008485	ddx54	98	64.444	ENSVVUG00000010212	DDX54	96	65.070	Vulpes_vulpes
ENSLOCG00000008485	ddx54	99	66.318	ENSXETG00000016410	ddx54	100	66.435	Xenopus_tropicalis
ENSLOCG00000008485	ddx54	100	73.090	ENSXCOG00000002909	ddx54	100	73.208	Xiphophorus_couchianus
ENSLOCG00000008485	ddx54	100	73.481	ENSXMAG00000005312	ddx54	100	73.776	Xiphophorus_maculatus