EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000008852 (Gene tree)
Gene ID: 102692072
Gene Symbol: lsm6
Alias: zgc:92379
Full Name: LSM6 homolog%2C U6 small nuclear RNA and mRNA degradation associated
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 3130 bases
Position: chrLG4:23963073-23966202
Accession: 102692072
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000010767	LSM	PF01423.22	4.5e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000010782	-	243	XM_006629495	ENSLOCP00000010767	80 (aa)	XP_006629558	W5MQV8

Gene Model

Click here to download ENSLOCG00000008852's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000008852's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000008852	lsm6	100	98.750	ENSLOCG00000017683	-	100	98.750
ENSLOCG00000008852	lsm6	83	48.485	ENSLOCG00000015744	snrpf	77	48.485