EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000008863 (Gene tree)
Gene ID: 102684322
Gene Symbol: zgc:171482
Alias: -
Full Name: zinc finger matrin-type protein 4-like
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 46380 bases
Position: chrLG5:17151770-17198149
Accession: 102684322
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000010801	zf-met	PF12874.7	3.1e-28	1	4
ENSLOCP00000010801	zf-met	PF12874.7	3.1e-28	2	4
ENSLOCP00000010801	zf-met	PF12874.7	3.1e-28	3	4
ENSLOCP00000010801	zf-met	PF12874.7	3.1e-28	4	4
ENSLOCP00000010788	zf-met	PF12874.7	3.4e-28	1	4
ENSLOCP00000010788	zf-met	PF12874.7	3.4e-28	2	4
ENSLOCP00000010788	zf-met	PF12874.7	3.4e-28	3	4
ENSLOCP00000010788	zf-met	PF12874.7	3.4e-28	4	4
ENSLOCP00000010801	zf-C2H2_jaz	PF12171.8	2.1e-20	1	2
ENSLOCP00000010801	zf-C2H2_jaz	PF12171.8	2.1e-20	2	2
ENSLOCP00000010788	zf-C2H2_jaz	PF12171.8	2.2e-20	1	2
ENSLOCP00000010788	zf-C2H2_jaz	PF12171.8	2.2e-20	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000010816	-	1605	XM_006630553	ENSLOCP00000010801	235 (aa)	XP_006630616	W5MQZ2
ENSLOCT00000010803	-	1605	-	ENSLOCP00000010788	235 (aa)	-	W5MQX9

Gene Model

Click here to download ENSLOCG00000008863's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000008863's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000008863	zgc:171482	93	43.860	ENSLOCG00000012305	znf346	72	42.795
ENSLOCG00000008863	zgc:171482	98	63.913	ENSLOCG00000015435	zmat4b	98	64.758