EuRBPDB

Description

Ensembl ID: ENSLOCG00000008966 (Gene tree)
Gene ID: 102693207
Gene Symbol: SMARCA5
Alias: ISWI|hISWI|hSNF2H
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 17840 bases
Position: chrLG4:24471403-24489242
Accession: 102693207
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000010948	ResIII	PF04851.15	9e-12	1	1
ENSLOCP00000010940	ResIII	PF04851.15	9.2e-12	1	1
ENSLOCP00000010948	DEAD	PF00270.29	2.3e-06	1	1
ENSLOCP00000010940	DEAD	PF00270.29	2.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000010956	SMARCA5-201	3493	-	ENSLOCP00000010940	1028 (aa)	-	W5MRD1
ENSLOCT00000010964	SMARCA5-202	3487	XM_006629501	ENSLOCP00000010948	1026 (aa)	XP_006629564	W5MRD9

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000008966	SMARCA5	96	86.437	ENSLOCG00000014591	smarca1	96	86.437
ENSLOCG00000008966	SMARCA5	53	44.954	ENSLOCG00000010574	chd1l	54	44.954