EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000009001 (Gene tree)
Gene ID: 102682694
Gene Symbol: YTHDC2
Alias: DKFZp564A186|FLJ10053|FLJ2194
Full Name: YTH domain containing 2
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 36154 bases
Position: chrLG2:30004415-30040568
Accession: 102682694
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000010962	R3H	PF01424.22	3.1e-11	1	1
ENSLOCP00000010962	DEAD	PF00270.29	2.3e-08	1	1
ENSLOCP00000010962	YTH	PF04146.15	2.2e-43	1	1
ENSLOCP00000010962	HA2	PF04408.23	1.4e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000010978	YTHDC2-201	5788	XM_006626949	ENSLOCP00000010962	1427 (aa)	XP_015222329	W5MRF3

Gene Model

Click here to download ENSLOCG00000009001's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000009001's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000009001	YTHDC2	56	48.039	ENSLOCG00000002158	dhx9	62	47.248
ENSLOCG00000009001	YTHDC2	53	48.230	ENSLOCG00000010159	dhx29	55	48.230
ENSLOCG00000009001	YTHDC2	54	46.602	ENSLOCG00000002125	dhx36	80	39.041
ENSLOCG00000009001	YTHDC2	56	45.420	ENSLOCG00000015774	dhx57	55	45.420
ENSLOCG00000009001	YTHDC2	50	36.703	ENSLOCG00000010283	dhx30	66	36.703