EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000009197 (Gene tree)
Gene ID: 102698146
Gene Symbol: ARF1
Alias: -
Full Name: ADP ribosylation factor 1
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 11925 bases
Position: chrLG9:20831058-20842982
Accession: 102698146
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000011218	MMR_HSR1	PF01926.23	1.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000011234	ARF1-201	3523	XM_006634179	ENSLOCP00000011218	188 (aa)	XP_006634242	W5MS59

Gene Model

Click here to download ENSLOCG00000009197's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000009197's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000009197	ARF1	98	92.935	ENSLOCG00000007812	arf3a	90	92.935
ENSLOCG00000009197	ARF1	92	43.956	ENSLOCG00000018349	arl4aa	91	43.956
ENSLOCG00000009197	ARF1	93	41.714	ENSLOCG00000017800	arl11	99	41.714
ENSLOCG00000009197	ARF1	94	84.746	ENSLOCG00000013270	ARF4	98	84.746
ENSLOCG00000009197	ARF1	94	43.548	ENSLOCG00000010965	arl3l2	99	43.548
ENSLOCG00000009197	ARF1	88	46.988	ENSLOCG00000015256	-	91	46.988
ENSLOCG00000009197	ARF1	88	46.386	ENSLOCG00000012693	arl3	91	46.386
ENSLOCG00000009197	ARF1	92	32.275	ENSLOCG00000001677	arfrp1	91	32.275
ENSLOCG00000009197	ARF1	88	43.023	ENSLOCG00000017515	arl4d	86	43.023
ENSLOCG00000009197	ARF1	97	30.435	ENSLOCG00000012467	arl8a	98	30.435
ENSLOCG00000009197	ARF1	96	47.778	ENSLOCG00000002608	arl5a	100	47.778
ENSLOCG00000009197	ARF1	92	48.066	ENSLOCG00000017842	arl4cb	90	48.066
ENSLOCG00000009197	ARF1	94	84.181	ENSLOCG00000016776	-	98	84.181
ENSLOCG00000009197	ARF1	76	32.639	ENSLOCG00000010197	sar1b	72	32.639
ENSLOCG00000009197	ARF1	87	47.239	ENSLOCG00000002173	arl2	89	47.239
ENSLOCG00000009197	ARF1	85	42.945	ENSLOCG00000010419	arl6	90	42.945
ENSLOCG00000009197	ARF1	94	48.864	ENSLOCG00000010851	arl8	98	48.864
ENSLOCG00000009197	ARF1	96	96.685	ENSLOCG00000012283	-	96	96.685
ENSLOCG00000009197	ARF1	97	31.522	ENSLOCG00000010957	arl8bb	98	31.522