EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000009307 (Gene tree)
Gene ID: 102688968
Gene Symbol: ccar1
Alias: hm:zehn1480|si:dkey-85g17.2|zehn1480
Full Name: cell division cycle and apoptosis regulator 1
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 23699 bases
Position: chrLG5:18195727-18219425
Accession: 102688968
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000011372	S1-like	PF14444.6	4.8e-33	1	1
ENSLOCP00000011365	S1-like	PF14444.6	5e-33	1	1
ENSLOCP00000011372	SAP	PF02037.27	3.2e-10	1	1
ENSLOCP00000011365	SAP	PF02037.27	3.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000011381	-	6219	-	ENSLOCP00000011365	1242 (aa)	-	W5MSK6
ENSLOCT00000011388	-	6129	XM_006630576	ENSLOCP00000011372	1212 (aa)	XP_015202347	W5MSL3

Gene Model

Click here to download ENSLOCG00000009307's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000009307's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000009307	ccar1	67	58.730	ENSLOCG00000015653	-	57	57.377