EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000009647 (Gene tree)
Gene ID: 102697950
Gene Symbol: -
Alias: -
Full Name: zinc finger and BTB domain containing 47
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 67454 bases
Position: chrLG9:25336393-25403846
Accession: 102697950
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000011791	zf-C2H2	PF00096.26	1.2e-31	1	4
ENSLOCP00000011791	zf-C2H2	PF00096.26	1.2e-31	2	4
ENSLOCP00000011791	zf-C2H2	PF00096.26	1.2e-31	3	4
ENSLOCP00000011791	zf-C2H2	PF00096.26	1.2e-31	4	4
ENSLOCP00000011791	zf-met	PF12874.7	8.1e-09	1	2
ENSLOCP00000011791	zf-met	PF12874.7	8.1e-09	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000011809	-	2604	XM_006634257	ENSLOCP00000011791	713 (aa)	XP_006634320	W5MTT2

Gene Model

Click here to download ENSLOCG00000009647's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000009647's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000009647	-	54	33.603	ENSLOCG00000004636	zbtb16a	56	36.898
ENSLOCG00000009647	-	67	41.129	ENSLOCG00000017810	zbtb14	61	35.526
ENSLOCG00000009647	-	50	32.601	ENSLOCG00000009778	prdm5	77	33.333
ENSLOCG00000009647	-	75	30.397	ENSLOCG00000011452	znf652	61	65.617