EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000009974 (Gene tree)
Gene ID: 102694929
Gene Symbol: zbtb49
Alias: zgc:158483
Full Name: zinc finger and BTB domain containing 49
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 11623 bases
Position: chrLG4:35671778-35683400
Accession: 102694929
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000012201	zf-C2H2	PF00096.26	1.9e-37	1	7
ENSLOCP00000012201	zf-C2H2	PF00096.26	1.9e-37	2	7
ENSLOCP00000012201	zf-C2H2	PF00096.26	1.9e-37	3	7
ENSLOCP00000012201	zf-C2H2	PF00096.26	1.9e-37	4	7
ENSLOCP00000012201	zf-C2H2	PF00096.26	1.9e-37	5	7
ENSLOCP00000012201	zf-C2H2	PF00096.26	1.9e-37	6	7
ENSLOCP00000012201	zf-C2H2	PF00096.26	1.9e-37	7	7
ENSLOCP00000012193	zf-C2H2	PF00096.26	1.1e-35	1	6
ENSLOCP00000012193	zf-C2H2	PF00096.26	1.1e-35	2	6
ENSLOCP00000012193	zf-C2H2	PF00096.26	1.1e-35	3	6
ENSLOCP00000012193	zf-C2H2	PF00096.26	1.1e-35	4	6
ENSLOCP00000012193	zf-C2H2	PF00096.26	1.1e-35	5	6
ENSLOCP00000012193	zf-C2H2	PF00096.26	1.1e-35	6	6
ENSLOCP00000012201	zf-met	PF12874.7	2.6e-12	1	2
ENSLOCP00000012201	zf-met	PF12874.7	2.6e-12	2	2
ENSLOCP00000012193	zf-met	PF12874.7	8.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000012214	-	3405	XM_006629597	ENSLOCP00000012193	769 (aa)	XP_006629660	W5MUY4
ENSLOCT00000012222	-	1808	-	ENSLOCP00000012201	457 (aa)	-	W5MUZ2

Gene Model

Click here to download ENSLOCG00000009974's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000009974's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000009974	zbtb49	57	38.406	ENSLOCG00000000544	znf319b	89	38.197
ENSLOCG00000009974	zbtb49	51	43.617	ENSLOCG00000004208	-	99	43.617
ENSLOCG00000009974	zbtb49	55	41.975	ENSLOCG00000013714	sp6	54	41.975
ENSLOCG00000009974	zbtb49	60	45.588	ENSLOCG00000005212	bcl6aa	64	45.588
ENSLOCG00000009974	zbtb49	54	33.161	ENSLOCG00000000947	znf341	55	33.673
ENSLOCG00000009974	zbtb49	66	43.810	ENSLOCG00000003926	znf236	67	43.810
ENSLOCG00000009974	zbtb49	53	45.625	ENSLOCG00000014366	-	94	44.444
ENSLOCG00000009974	zbtb49	56	35.135	ENSLOCG00000000232	zbtb37	76	35.577
ENSLOCG00000009974	zbtb49	58	46.486	ENSLOCG00000016466	-	98	46.486
ENSLOCG00000009974	zbtb49	57	33.333	ENSLOCG00000003238	si:dkey-89b17.4	86	35.556
ENSLOCG00000009974	zbtb49	66	44.444	ENSLOCG00000014144	-	99	44.444
ENSLOCG00000009974	zbtb49	58	46.939	ENSLOCG00000000714	-	90	46.939
ENSLOCG00000009974	zbtb49	51	42.784	ENSLOCG00000017422	-	77	42.784
ENSLOCG00000009974	zbtb49	57	38.406	ENSLOCG00000003678	znf319b	89	38.197