EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000010100 (Gene tree)
Gene ID: 102697757
Gene Symbol: rad54b
Alias: im:7137737|im:7153525
Full Name: fibrinogen silencer binding protein
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 38273 bases
Position: chrLG11:34162521-34200793
Accession: 102697565
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000012361	ResIII	PF04851.15	4e-10	1	1
ENSLOCP00000012370	ResIII	PF04851.15	4.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000012391	-	2547	-	ENSLOCP00000012370	849 (aa)	-	W5MVG1
ENSLOCT00000012387	-	3262	XM_006636121	ENSLOCP00000012366	308 (aa)	XP_006636184	W5MVF7
ENSLOCT00000012382	-	3729	XM_006636122	ENSLOCP00000012361	940 (aa)	XP_006636185	W5MVF2

Gene Model

Click here to download ENSLOCG00000010100's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000010100's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000010100	rad54b	81	42.775	ENSLOCG00000004144	rad54l	88	46.305
ENSLOCG00000010100	rad54b	59	31.835	ENSLOCG00000012909	smarcad1a	52	31.835