EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000010106 (Gene tree)
Gene ID: 102685868
Gene Symbol: puf60b
Alias: fe37c05|si:ch211-12p8.2|si:zc12p8.2|wu:fb33e11|wu:fe37c05|zgc:86806
Full Name: poly(U) binding splicing factor 60
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 25656 bases
Position: chrLG9:27965201-27990856
Accession: 102685868
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000012392	RRM_1	PF00076.22	1.2e-44	1	2
ENSLOCP00000012392	RRM_1	PF00076.22	1.2e-44	2	2
ENSLOCP00000012377	RRM_1	PF00076.22	1.2e-44	1	2
ENSLOCP00000012377	RRM_1	PF00076.22	1.2e-44	2	2
ENSLOCP00000012383	RRM_1	PF00076.22	1.2e-44	1	2
ENSLOCP00000012383	RRM_1	PF00076.22	1.2e-44	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000012413	-	1659	-	ENSLOCP00000012392	527 (aa)	-	W5MVI3
ENSLOCT00000012398	-	1775	XM_006634281	ENSLOCP00000012377	526 (aa)	XP_006634344	W5MVG8
ENSLOCT00000012404	-	1659	-	ENSLOCP00000012383	527 (aa)	-	W5MVH4

Gene Model

Click here to download ENSLOCG00000010106's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000010106's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000010106	puf60b	58	35.294	ENSLOCG00000010843	-	69	35.294