EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000010159 (Gene tree)
Gene ID: 102687679
Gene Symbol: dhx29
Alias: zmp:0000000603
Full Name: DExH-box helicase 29
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 32118 bases
Position: chrLG2:37394360-37426477
Accession: 102687679
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000012456	DEAD	PF00270.29	4.1e-10	1	1
ENSLOCP00000012446	DEAD	PF00270.29	4.2e-10	1	1
ENSLOCP00000012456	HA2	PF04408.23	3.4e-16	1	1
ENSLOCP00000012446	HA2	PF04408.23	3.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000012477	-	7591	XM_006627061	ENSLOCP00000012456	1365 (aa)	XP_015192704	W5MVP7
ENSLOCT00000012467	-	7627	-	ENSLOCP00000012446	1377 (aa)	-	W5MVN7

Gene Model

Click here to download ENSLOCG00000010159's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000010159's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000010159	dhx29	69	36.317	ENSLOCG00000002125	dhx36	83	39.315
ENSLOCG00000010159	dhx29	58	34.061	ENSLOCG00000010283	dhx30	61	35.887
ENSLOCG00000010159	dhx29	60	39.000	ENSLOCG00000015774	dhx57	61	39.145
ENSLOCG00000010159	dhx29	55	48.230	ENSLOCG00000009001	YTHDC2	53	48.230
ENSLOCG00000010159	dhx29	62	32.670	ENSLOCG00000002158	dhx9	60	34.188