EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000010743 (Gene tree)
Gene ID: 102682218
Gene Symbol: hnrnpd
Alias: wu:fa28b06|zgc:162951
Full Name: heterogeneous nuclear ribonucleoprotein D0-like
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 7950 bases
Position: chrLG2:43185487-43193436
Accession: 102682218
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000013165	CBFNT	PF08143.11	6.2e-06	1	1
ENSLOCP00000013165	RRM_1	PF00076.22	3.9e-35	1	2
ENSLOCP00000013165	RRM_1	PF00076.22	3.9e-35	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000013193	-	1361	XM_006627033	ENSLOCP00000013165	311 (aa)	XP_006627096	W5MXQ6

Gene Model

Click here to download ENSLOCG00000010743's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000010743's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000010743	hnrnpd	90	63.514	ENSLOCG00000009773	hnrnpabb	91	64.724
ENSLOCG00000010743	hnrnpd	64	50.926	ENSLOCG00000004675	msi2b	89	55.789
ENSLOCG00000010743	hnrnpd	56	40.331	ENSLOCG00000006476	-	53	39.303
ENSLOCG00000010743	hnrnpd	50	34.810	ENSLOCG00000006604	tardbpl	52	32.569
ENSLOCG00000010743	hnrnpd	66	38.528	ENSLOCG00000002243	dazap1	56	38.528
ENSLOCG00000010743	hnrnpd	67	34.667	ENSLOCG00000003456	rbm38	66	34.667
ENSLOCG00000010743	hnrnpd	56	42.541	ENSLOCG00000006986	hnrnpa3	55	41.969
ENSLOCG00000010743	hnrnpd	88	65.248	ENSLOCG00000010736	hnrnpdl	95	65.125