EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000010843 (Gene tree)
Gene ID: 102693098
Gene Symbol: -
Alias: -
Full Name: U2 small nuclear RNA auxiliary factor 2
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 14940 bases
Position: chrLG10:27755653-27770592
Accession: 102693098
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000013298	RRM_1	PF00076.22	1.4e-34	1	3
ENSLOCP00000013298	RRM_1	PF00076.22	1.4e-34	2	3
ENSLOCP00000013298	RRM_1	PF00076.22	1.4e-34	3	3
ENSLOCP00000013289	RRM_1	PF00076.22	1.8e-34	1	3
ENSLOCP00000013289	RRM_1	PF00076.22	1.8e-34	2	3
ENSLOCP00000013289	RRM_1	PF00076.22	1.8e-34	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000013317	-	1461	-	ENSLOCP00000013289	486 (aa)	-	W5MY30
ENSLOCT00000013326	-	1401	XM_006635082	ENSLOCP00000013298	466 (aa)	XP_006635146	W5MY39

Gene Model

Click here to download ENSLOCG00000010843's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000010843's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000010843	-	59	83.696	ENSLOCG00000008050	u2af2b	85	80.537
ENSLOCG00000010843	-	69	35.294	ENSLOCG00000010106	puf60b	58	35.294