EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000011245 (Gene tree)
Gene ID: 102684216
Gene Symbol: si:dkey-37o8.1
Alias: fi12b10|wu:fi12b10
Full Name: elongation factor 1-alpha 1-like
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 3841 bases
Position: chrLG9:32896054-32899894
Accession: 102684216
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000013825	GTP_EFTU	PF00009.27	4.2e-53	1	1
ENSLOCP00000013825	GTP_EFTU_D2	PF03144.25	1.9e-12	1	1
ENSLOCP00000013825	GTP_EFTU_D3	PF03143.17	4e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000013854	-	1781	XM_006634359	ENSLOCP00000013825	459 (aa)	XP_006634422	W5MZL6

Gene Model

Click here to download ENSLOCG00000011245's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000011245's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000011245	si:dkey-37o8.1	95	38.532	ENSLOCG00000016221	hbs1l	60	38.532
ENSLOCG00000011245	si:dkey-37o8.1	99	75.163	ENSLOCG00000004048	eef1a2	98	75.163
ENSLOCG00000011245	si:dkey-37o8.1	100	74.026	ENSLOCG00000000907	-	100	74.026
ENSLOCG00000011245	si:dkey-37o8.1	95	36.322	ENSLOCG00000007431	gspt1	73	36.322
ENSLOCG00000011245	si:dkey-37o8.1	100	73.593	ENSLOCG00000016168	eef1a1b	99	73.593