EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000011405 (Gene tree)
Gene ID: 102685389
Gene Symbol: tial1
Alias: zgc:66130
Full Name: TIA1 cytotoxic granule associated RNA binding protein like 1
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 22196 bases
Position: chrLG5:28933891-28956086
Accession: 102685389
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000014026	RRM_1	PF00076.22	2.7e-60	1	3
ENSLOCP00000014026	RRM_1	PF00076.22	2.7e-60	2	3
ENSLOCP00000014026	RRM_1	PF00076.22	2.7e-60	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000014055	-	3372	XM_006630730	ENSLOCP00000014026	452 (aa)	-	W5N067

Gene Model

Click here to download ENSLOCG00000011405's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000011405's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000011405	tial1	64	30.588	ENSLOCG00000007519	pabpc1l	57	30.588
ENSLOCG00000011405	tial1	61	30.178	ENSLOCG00000002772	rbm4.1	91	30.178
ENSLOCG00000011405	tial1	62	34.615	ENSLOCG00000012575	ELAVL2	86	34.615
ENSLOCG00000011405	tial1	65	38.462	ENSLOCG00000007647	elavl3	92	38.462
ENSLOCG00000011405	tial1	63	35.897	ENSLOCG00000009363	elavl4	79	35.897
ENSLOCG00000011405	tial1	89	72.771	ENSLOCG00000015324	tia1l	100	72.705