EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000011599 (Gene tree)
Gene ID: 102682790
Gene Symbol: igf2bp3
Alias: IMP3|Vg1 RBP|dvr1rbp|wu:fb79c12|wu:fe06h09|zVg1RBP
Full Name: insulin like growth factor 2 mRNA binding protein 3
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 41968 bases
Position: chrLG11:40443229-40485196
Accession: 102682790
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000014257	KH_1	PF00013.29	1.1e-57	1	4
ENSLOCP00000014257	KH_1	PF00013.29	1.1e-57	2	4
ENSLOCP00000014257	KH_1	PF00013.29	1.1e-57	3	4
ENSLOCP00000014257	KH_1	PF00013.29	1.1e-57	4	4
ENSLOCP00000014265	KH_1	PF00013.29	1.2e-57	1	4
ENSLOCP00000014265	KH_1	PF00013.29	1.2e-57	2	4
ENSLOCP00000014265	KH_1	PF00013.29	1.2e-57	3	4
ENSLOCP00000014265	KH_1	PF00013.29	1.2e-57	4	4
ENSLOCP00000014257	RRM_1	PF00076.22	1.8e-17	1	2
ENSLOCP00000014257	RRM_1	PF00076.22	1.8e-17	2	2
ENSLOCP00000014265	RRM_1	PF00076.22	1.9e-17	1	2
ENSLOCP00000014265	RRM_1	PF00076.22	1.9e-17	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000014294	-	3584	-	ENSLOCP00000014265	617 (aa)	XP_015213455	W5N0V6
ENSLOCT00000014286	-	3656	XM_006636046	ENSLOCP00000014257	606 (aa)	XP_006636109	W5N0U8

Gene Model

Click here to download ENSLOCG00000011599's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000011599's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000011599	igf2bp3	60	33.577	ENSLOCG00000005598	pcbp2	65	34.307
ENSLOCG00000011599	igf2bp3	99	69.868	ENSLOCG00000009564	igf2bp2b	99	68.637
ENSLOCG00000011599	igf2bp3	60	31.111	ENSLOCG00000013402	pcbp4	69	32.184
ENSLOCG00000011599	igf2bp3	59	32.402	ENSLOCG00000006229	khsrp	52	32.335
ENSLOCG00000011599	igf2bp3	96	73.765	ENSLOCG00000013497	igf2bp1	97	75.472
ENSLOCG00000011599	igf2bp3	61	34.507	ENSLOCG00000009369	pcbp3	50	34.507